Xenopus laevis (African clawed frog): 108702183
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Entry
108702183 CDS
T01010
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X2
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108702183
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108702183
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
108702183
NCBI-ProteinID:
XP_018093178
UniProt:
A0A8J0TYA1
LinkDB
All DBs
Position
9_10S:6856632..6924019
Genome browser
AA seq
1690 aa
AA seq
DB search
MFTILANCVFMTMSDPPPWSKNVEYTFTGIYTFESLIKIFARGFCIDSFTFLRDPWNWLD
FCVIVMAYTTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILT
LFCLAVFALIGLQLFMGNLRHKCVLWPPPDDYFILFDNSTLNATLYNDTAINSTLSNSTE
VFNNYTIDWDAYLNDEANFYFLDGASDALLCGNGSDAGKCPESYTCMKTGRNPNYGYTSY
DSFNWAFLALFRLMTQDFWENLFQLTLRAAGKTYMVFFVIVIFLGSFYLINLILAVVAMA
YAEQNEATIQEELEKEREFQELLEQLKKHQEEQKRRKSSVASVGLINTAKKKALSEHSLA
GDGTENMDCNGRAVPKVISDHVPSLEDTSSAQSNQQRNSTIYLEEPTLQKRAESNHSVES
EVALEELEDVNQKCPPWWYKFAHTFLIWDCCVPWVKFKEFVRFVVMDPFVDLGITICIVL
NTLFMAMEHYPMTEEFENVLGVGNLVFTGIFAAEMFFKIIALDPYYYFQVGWNIFDSIIV
TLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKSYKECVCKIASDCELPRWHMHDFFHSFLIVFRILCGEWIETMWDCM
EVAGQAMCLVVFMMVMVIGNLVVLNLFLALLLSSFSADNLSASDDDGEMNNLQIALGRIT
RGIDFVKKTFFSILHFKRKPKTEQKEEDPNKENIALNQTEPEPKTELEPKTEPPLIDGVT
KKERYFLDEFDHVNFINNPNICIEVPIASEESDFEIPDTDEFSTQSEVEEHKKYGDGSSM
CSTADYKPPEPKEEEEALEEKEEEGPEECFTEGCVRRFPCLYVDITTEKGKIWWNIRKTC
FVIVEHNWFETFIIFMILLSSGALAFEDIYIEQRQVIKTVLEYADKVFSYIFVFEMLLKW
VAYGFKVYFTNAWCWLDFLIVDVSLISLTANWLGYSELGPIKSLRTLRALRPLRALSRFE
GMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTSELFELDVVN
NRSECLALNNTEQVRWVNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNIEDQPQ
YEINLYMYLYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMK
KLGSKKPQKPIPRPTNKIQGLVFDLVTKQAFDIVIMILICLNMVTMMVETDDQSQEKTDI
LFKINLVFIVVFTSECVLKMFALRHYFFTIGWNIFDFVVVIISIVGIVLSDLIAEYFVSP
TLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNF
AYVKKESGVDDIFNFETFGNSIICLFQITTSAGWDGLLNPILNSGPPDCDPHMENPGTTV
TGDCGNPAIGIVFFCSYIIISFLIVVNMYIAIILENFNVATEESGEPLCEDDFEMFYETW
EKFDLDATQFVDYSRMSDFVDTLEDPLRIPKPNKIKLITMDLPMVIGDKIHCLDILFALT
KEVLGDSGEMDALKESMEEKFMAANPSKVSREPITTTLKRKQEEVCAIKIQRAFRRYLLK
RSGKHASRQSNDEETPAEGSPEKEGLMADRIHAAYDKYEEEGRDGGAHRPRATNRSSCSS
IDHDVRETDV
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccatcttagcaaattgtgtttttatgaccatgagtgacccaccaccgtggtcc
aagaatgtagagtacacgtttactggaatttacacctttgagtccttaataaaaatcttc
gctcggggattttgtattgacagttttacattcctcagagatccctggaactggctggat
ttctgtgtcattgttatggcttacaccacagagtttgtagatttggggaatgtgtctgct
ctcaggacattccgtgtactccgtgctcttaaaacaatcacagtaattccaggcctgaag
accattgttggtgccttgatccagtcagtgaagaagctctcagatgtgatgatcctcacc
ctcttctgtcttgctgtctttgccctcattggccttcagctctttatgggaaacctgagg
cacaaatgtgttctatggccaccccccgatgactatttcatactttttgacaacagtacc
ttaaacgccacactatataatgatacagcgatcaactccactctcagcaacagcacagag
gtgtttaacaactacaccattgactgggatgcctacctcaatgatgaagccaatttttac
ttcctggatggagcaagtgatgctcttctgtgtgggaacggcagcgacgctgggaaatgt
ccggaaagttatacttgtatgaaaactggaaggaatcctaattacgggtacaccagctat
gactccttcaactgggcttttcttgcccttttccgcttaatgacacaagacttctgggag
aatcttttccagttgacactacgagcagctggtaaaacctacatggtcttctttgtgata
gtaatatttctggggtctttctacctgattaacttgatccttgctgtggtggccatggca
tatgcagaacagaatgaagccaccatccaagaagaattagaaaaggaaagagagttccag
gagcttttggagcagttgaagaaacatcaagaagagcaaaaacgtaggaagtccagtgtt
gcctcagttgggctcatcaacacagcaaagaaaaaagctctttcagagcacagccttgct
ggggatggcacagaaaatatggactgcaacgggcgagcggtgcccaaagttatatctgat
catgtgccttctttggaggatacaagctcagcacagtcaaatcaacagaggaattctacg
atttatttggaggagccaactctgcagaaaagagcagagagcaaccacagtgtcgagtca
gaagttgctcttgaagaactggaagacgttaatcaaaaatgccctccctggtggtacaag
tttgctcacacctttttgatctgggattgctgtgttccatgggtgaagtttaaggaattc
gtaaggtttgtggtcatggatccctttgtcgacttgggaatcaccatttgcatcgtactt
aacacccttttcatggccatggaacattaccctatgacagaggaatttgagaatgttctg
ggtgtaggaaacttggtcttcactggcatatttgcagctgaaatgttcttcaagatcata
gccctggatccatattactacttccaagtggggtggaacatatttgacagcattatagtc
accttgagtttggtggagttgggccttgcaaatgtagaaggcctgtctgtgctcagatcg
ttccgtctgctcagggttttcaagcttgccaaatcatggccaacccttaacatgctcatc
aaaatcatcggtaactcagtcggagctcttggaaacctgactttggtgttggccatcatt
gtcttcatctttgccgtggtggggatgcagctgttcgggaagagctacaaggaatgcgtg
tgcaagattgcttccgactgcgagctgccacggtggcacatgcatgacttcttccactct
tttctcattgtcttccggatcctgtgcggggagtggattgagacgatgtgggactgcatg
gaagtggcggggcaagccatgtgcctggtcgtgtttatgatggtcatggtgatcggtaac
ctggtggtcctcaatctctttttggctttgttgctgagttccttcagcgcggacaactta
tcggcctcggatgatgatggggagatgaacaacctacagattgctcttggaaggatcacc
aggggaattgactttgtgaagaaaactttcttctctatcctgcactttaagaggaagcca
aaaaccgaacagaaggaagaggaccctaacaaagaaaacattgctctcaaccagacagaa
ccagaacccaagacagaactggaacccaagacagaacctccactgattgatggtgtgact
aaaaaagaacgttatttcttggatgaatttgaccacgtcaattttattaacaacccaaac
atttgtatagaagttcctatcgcatcagaagagtccgactttgaaattccagatacggat
gagtttagcacacagtcggaggtggaggaacacaagaagtatggcgacggctcttcaatg
tgtagcacagcagattacaaacctccagaacccaaagaggaagaggaggccttagaagaa
aaagaagaggaaggcccagaggaatgtttcactgagggttgtgtgcgccgattcccttgt
ctttatgtcgacatcacaacagaaaaagggaaaatctggtggaacattcggaaaacatgt
tttgtgattgtggagcacaactggtttgaaaccttcatcatcttcatgatcttactcagt
agtggagcactggcatttgaggatatctacattgaacagaggcaagtgataaagactgtc
ctggaatacgctgataaagtcttttcatatatctttgtgtttgaaatgctactcaagtgg
gtggcatatggcttcaaggtctatttcacgaatgcttggtgttggctggacttcctaatt
gttgatgtgtctttaatcagcctgacagccaactggttgggttactctgaacttggcccc
atcaaatcccttagaaccttgagggccctcagaccgttacgagcgttgtcaagatttgaa
ggcatgagagtggttgtgaacgcccttctaggagccattccttctatcatgaatgtcctg
ctggtttgtttgatcttctggctcatcttcagcatcatgggtgttaatctctttgctggg
aaattttatcgatgcatcaacacaaccacgtcagaattatttgagctcgacgtggtcaac
aaccgctccgaatgccttgctttaaacaacacagagcaagtgcgatgggttaatgtcaaa
gtgaattttgacaatgtgggccttgggtatctctcccttctacaagtggcaactttcaaa
ggctggatggatatcatgtatgctgctgtagattcccggaatattgaggaccagccgcaa
tatgaaatcaatctctatatgtatttgtactttgtcatattcatcatttttggagccttt
ttcactctaaacctgttcattggcgtcattatcgacaacttcaatcagcagaagaaaaag
tttggaggtaaggacatctttatgactgaggaacagaagaaatactacaacgctatgaaa
aagctcgggtccaaaaaacctcaaaaaccaattccaagacccacgaacaaaattcaaggt
ttggtgtttgacttggtcacaaagcaggcctttgacattgtcattatgattttaatttgc
ctcaacatggtgacgatgatggttgaaacagacgatcagagccaggaaaaaactgatatt
cttttcaagatcaatctggtgttcattgtcgtatttacgagtgaatgtgttctcaaaatg
tttgctctcaggcactactttttcacaattggatggaacatatttgactttgtggtggtc
atcatttctattgtcggtattgttctctcggatctcatagcagaatactttgtttcacca
acacttttcagagtcatcagactggcgagaatcggtagagttcttcgtctcattagagga
gcaaagggaattcgcacactactttttgccctaatgatgtctctccccgctctatttaat
attgggcttctgcttttcttagttatgttcatctattcaatctttggaatgtccaatttt
gcctacgtaaagaaagaatccggagtagatgacatatttaattttgaaacctttggaaac
agcataatatgcttgttccaaatcaccacatctgctggttgggatggtcttctaaatcca
atcctaaatagtggccctccagattgtgaccctcatatggagaaccctggaacaactgtt
actggtgattgtggtaacccggctataggtatagttttcttctgcagctacatcatcatt
tcatttttaatagttgtcaatatgtacattgccattatcctggagaactttaatgttgcc
actgaagagagtggcgagccattatgtgaggatgactttgagatgttttatgaaacttgg
gagaagtttgatctggatgccacgcagtttgttgattacagtcggatgtcagactttgta
gacactttggaagaccctctacgaattccaaagcctaacaaaataaaactaattactatg
gatcttccgatggtaattggagataagattcactgcttggacattctatttgcactcact
aaagaggtgttgggggactcaggagaaatggatgcattaaaagaatcaatggaagaaaag
tttatggctgcaaatccatcaaaagtgtctcgtgaaccaatcaccaccactctgaaaagg
aagcaggaagaagtctgtgccatcaaaatccagagggcttttaggagatatctactgaag
cgttcggggaaacacgcttcccgacagagtaacgatgaagagacaccagctgagggatct
cctgaaaaagaagggttgatggcagatagaattcatgcagcatatgacaaatatgaagag
gaaggacgagatggtggagctcaccgcccaagagcaacaaacaggagttcatgcagcagt
atagatcatgatgtaagggagaccgatgtgtag
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