Xenopus laevis (African clawed frog): 108702995
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Entry
108702995 CDS
T01010
Symbol
rapgef4.S
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X2
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04081
Hormone signaling
xla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
108702995 (rapgef4.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108702995 (rapgef4.S)
Membrane trafficking [BR:
xla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
108702995 (rapgef4.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
nSTAND_NTPase4
Motif
Other DBs
NCBI-GeneID:
108702995
NCBI-ProteinID:
XP_018094354
Xenbase:
XB-GENE-17330194
UniProt:
A0A8J0U0G7
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All DBs
Position
9_10S:67080556..67209671
Genome browser
AA seq
1024 aa
AA seq
DB search
MVAAHTAHSTSSAEWIACLDKRPLERSGEDVDIIFARLKEVKAFERFHPNLLQQICFCGY
YENLEKGITLYRQGDIGTSWYAVLTGSLDVKVSETNNHQDAVVICTLGVGTAFGESILDN
TPRHATILTRENCELLRIEQKDFKALWEKYRQHMAGFLAPPYGVLETGSNDRLSDKDNMN
SALGPGSKNCNKTPLTENQIPIRPAKTITEVPSERILRAGKTLRNALLSRAPHMIRDRKY
HLKTYRQCCVGTELVDWLMQQSSCVHSRTQAVGMWQVLLEEGVLNHVDQEYYFQDKYLFY
RFLDDDHEDAPMLTEEEKKESDEELQDTLLLLSQIGPDAHMRMILRKPPGQRSADDLEII
FEELIHIKALSHLSTTVKRELAGFLIFESHPKAGTVLFNQGEEGTSWYIILKGSVNVVIY
GKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRL
KEHDQDVLVLEKTPAGSQGSVQGITQSPYKYTVMSGNPEKLLEHFLETMRLEPSSSDTTD
TALDDFILMHCVFMPNSQLCPALMAHYHAQPSQGTEQEKLDYTLNNKRRVIRLVQQWATL
YGDLLREDVVSMAFLEEFYVSVSDDTRTTAALKEQLPDLERTIKQISEDAKGQQKKHKVL
LRQFSTGDERLQKRQAIRSSDEILFKVYCIDHTYITIRVAVAASVKEVLSAVADKLGSGD
SLILIKISSAGEKVVLKPNDISVFTTLSVNGRLFACPRDQFDSLTPLQEQEGPSTGTMST
FELMSSKDLAYQMTIHDWDLFSCVNELELIYHTFGRQNFKKTTANLDLFLRRFNEIQFWV
VTEICLCPQLSKRVQLLKKFIKIAAHCKEYKNLNSFFSIVMGLSNVAVSRLSLTWEKLPS
KFKKIYAEFENLMDPSRNHRAYRLTVAKLEPPIIPFTPLLIKDMTFTHEGNKTFIDNLVN
FEKMRMIANTLRTIRYCRSVPFNPDASLASKNHQDVRNYVRQFNVIDNQRTLSQMSHRLE
PRRA
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgcacacactgcccattctacctcctctgctgaatggattgcctgcttagat
aaaaggcctctggaacgttcaggagaagatgtggacatcatatttgcaagacttaaagaa
gttaaagcttttgagagatttcacccaaatcttcttcagcagatatgcttttgtggatac
tatgaaaacctggaaaagggcattacattgtaccgtcaaggtgatataggaacaagttgg
tatgcagtactaacaggatcactggatgttaaagtatccgaaacaaacaaccaccaggat
gcagtcgtcatatgcactctgggtgttggaacggcttttggcgaatccatattggacaat
accccacggcatgccaccattctcacaagggaaaactgcgaactccttcgtattgagcag
aaggattttaaagcactttgggagaaatatcggcagcatatggcgggcttcttggctcca
ccctatggtgttctggaaaccggatctaatgacagactctcagacaaagataatatgaat
agtgctctgggaccaggatccaaaaactgtaataagacccccctcactgaaaaccaaatc
ccgatacgtccagctaaaaccattacagaggttccttcagaaagaatactcagggctgga
aagactttgcgtaatgccctcctttctcgggcaccccacatgattagagatcgaaagtat
catctgaaaacatacaggcaatgctgtgttggaactgagcttgttgactggctcatgcag
caaagctcatgcgttcattctcgaacacaagcagtgggaatgtggcaggtgctgctcgaa
gaaggagtcctaaaccatgtggaccaagaatattacttccaagacaaatacctgttttat
cggtttcttgatgatgatcatgaggatgctccgatgctgacagaggaggagaaaaaggag
agtgatgaggagctgcaggatacgttgctcctactctctcagataggaccagatgcacat
atgagaatgattctgagaaaaccaccaggtcagaggagtgcagatgatttagaaattatt
ttcgaagaacttattcacattaaagccttatctcacttatcaacaacagttaaacgagaa
cttgctggatttttaatctttgaatctcatcccaaagcaggaacagtgttatttaaccaa
ggagaagaaggcacttcctggtacattatcttgaaaggatcagtcaatgttgtcatctat
ggaaagggggttgtatgcactttgcatgagggtgatgactttgggaagcttgcccttgtt
aatgatgccccgagagcagcatctattgttttacgagaagacaactgtcacttcctgcgt
gtggacaaggaggacttcaatcgaatcctgcgggatgtggaagcaaacacagtgagactc
aaggagcatgatcaagatgtcttagtactagaaaaaaccccagctggatctcaaggctca
gtacaagggatcactcaatctccatataaatacactgtgatgtcaggaaacccagagaaa
ctcctggaacacttcctagaaacaatgcgtcttgaaccaagttcaagtgacacaacagat
actgctttggacgattttattctgatgcactgtgttttcatgccaaattctcagctctgc
ccagccttaatggcacattaccatgcgcagccttcccagggaacagagcaggagaagctg
gattacaccctgaataacaagcggagagtaatacgattggtgcagcaatgggctactctt
tatggggacttgctccgtgaggatgtggtttccatggcctttcttgaagaattttatgtg
tcggtatcagatgatacaagaacaactgcagccctgaaggagcagctaccagacctggaa
cgaaccataaagcaaatatctgaggatgcaaagggacaacaaaagaagcacaaggtgctt
ttacggcagttcagcactggagatgagagactgcaaaagcgccaggcaatacggagttcc
gacgaaattctgttcaaggtatactgcatagaccatacatatatcactatacgtgtagct
gttgctgcttcagtgaaagaagtgctctctgcggtcgctgataaactaggctccggggac
agcttgatactcatcaaaatcagttctgcaggagaaaaagtggtgctgaaaccaaatgac
atatccgtgtttacaacgctcagtgtgaatggacgtctgtttgcctgcccccgggaccag
tttgattctttgacacctctccaagaacaagaggggccttctactggaaccatgtcaact
tttgaactcatgagctctaaagacttggcttatcagatgaccattcatgactgggaccta
ttcagttgtgtgaatgagctggaacttatttaccacacatttgggagacagaattttaaa
aagacaacggcaaatttggacctcttcctgagacgctttaatgaaattcagttctgggtt
gtgactgagatttgcctgtgccctcaactcagcaagcgcgttcaacttctaaagaaattt
attaaaattgcggcccattgcaaggaatataaaaatttgaactccttcttctctattgtc
atggggctgagtaacgtggccgtaagccgcctctcgctgacatgggagaaactcccaagc
aagttcaaaaagatctatgcagaatttgaaaatttaatggatccatcaaggaatcacaga
gcttatagactcactgtagctaaactggagcccccgatcattccatttacacctctacta
attaaagatatgacttttacccatgagggcaacaaaaccttcattgacaatttagtaaac
tttgagaaaatgcgtatgattgcaaacaccttgagaacaataagatactgcagaagtgtc
cctttcaatcccgatgcctctctcgccagtaaaaatcaccaggatgtgcggaattacgta
cgtcaattcaatgtgattgacaaccagagaacactctctcagatgtctcatcgactagaa
ccgcgccgagcctaa
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