Xenopus laevis (African clawed frog): 108703939
Help
Entry
108703939 CDS
T01010
Name
(RefSeq) uncharacterized protein LOC108703939
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108703939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108703939
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xla04054
]
108703939
Membrane trafficking [BR:
xla04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
108703939
Pattern recognition receptors [BR:
xla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108703939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
FIIND
UPA-FIIND
CARD
PYRIN
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
108703939
NCBI-ProteinID:
XP_018095735
UniProt:
A0A8J0U475
LinkDB
All DBs
Position
9_10L:complement(133025756..133059001)
Genome browser
AA seq
1144 aa
AA seq
DB search
MAENAREALMAALRRLSSSRFKEFKEKLSTWDIPLEYERIPQNQLQKAGRTGAAILITSF
YGNEYGLSKAFHLIDTICLSQECKSITAKKHGRIFQGDIFRRKAIPNQQLEYGSKSDYLS
PDKKPSEDSDWEEMMSLCPGPMTKVLKDNKDKSRVLHHRGTPASIPSVIPATSSGSKTQG
KRPEGDMSDKQNRLDTYQGHHFPHNNQRSLSRAGFYYVGPGDRVRCFSCGGELENWKYWA
DPLTRHQRSFPDCPYVKGQVKREKFQVSPVSITEGETLTQVSPSYSSIFGEKDKSLGRMS
DQYNRLETYRGHSNNFPHNNPLSLSRAGFYYVGPGDRVQCFSCGGELENCEFRDDPLTRH
QLSFPDCPFVKGQVNREKFQVSSVPITEGETLTQVSPSCSSNLGEKDKSLGTMSDEHNRL
ETYGGYSCRFPYSNPQSLSRAGFYYVGPGDRVRCFSCGGELENWEYWDVPFTRHQLSFPG
CPYVRGLVTRKHYQVRPGLLAGDSMTQVHPSSSNILWEEKLLSDMSDEYKRLETYRGYSN
NFQKNNPLSLAWAGFYYVGPGDRVRCFSCGGELENCEFREDPLTRHQLSFPDCLYVLHKD
HAMKDLKAYLQSQKFQTTAFSSSVTDYDNSEPVKRHFGKCTDPPVSSLSRDPPLRGCNKR
GKKKKKKKKRVQEKTAFEEMQAETAGGLTEEVARGLEDSSIGKLEERVTGELEVDFAEWL
QGSSAEELEYSSLEELEDGSTGELEEGTVGKLEEHVIEQTKEPCDWSSRSVMECKLCGKV
PDAIKVHTRKDGDKYRLELPYEGRFCCSETGIRFCVESPTSIEFEFGSWDEYLGHLEQYS
YHIVSPLFDITIKCGWVSEVYLPHYVCLGGGHVVTEEFKVVHYKDDNMVLETPAEVLPFY
VVLKQPTFSPIGILLLRKLPSRVRRNFPTHGAVFLYSRYITGYTLHLYFMPMDPSLKKAL
DKEEGENGFSWVAKPPKTSTVFSRRIYIVEGPDKAKIKPKGLRLSFGDCPALYHYSEIYL
LNVDEELSLSLTCTTSQKGIWDALLRREDLTPRSQMERDGQHFINNHRADLIARVSLIDP
VLDDLLGDKILTQEQYDTVRSNRTSQEKMRQLYEYVRSWGKIEMEMFYSTLTAHNKALIR
DLLQ
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaatgcacgagaggccctgatggcagccctgaggagattaagcagcagcaga
ttcaaggagtttaaggagaagctgagcacctgggatatacctctggagtatgagcggatc
ccgcagaaccagttacaaaaagcaggcaggacaggggctgctattcttattacaagcttt
tatggcaacgaatatggactttcaaaggcattccatctaatagatacaatctgcctcagt
caggagtgtaaaagtataactgcaaagaaacatggacggatatttcagggtgacatcttc
cgtcggaaagccataccaaatcagcagctggagtatggcagtaagagtgactacctctct
ccggacaagaaaccctcagaggatagtgactgggaagaaatgatgagcctttgccctggt
ccgatgactaaagtcctcaaagataataaagataagagcagggttctccaccacagaggg
acacctgcatcaataccaagtgtgataccagcaacctccagtggctccaaaacccagggg
aagagaccagaaggggacatgagtgataaacagaacaggttagacacttaccagggacat
catttcccacataacaaccagcgaagcttgtcccgggcaggattctactatgtggggcct
ggggaccgggtgcggtgtttctcctgtgggggagagttggagaattggaaatactgggct
gatcccctcacccgacaccaacgctccttccctgactgcccctatgtgaaggggcaagta
aagagggaaaagttccaagtaagcccagtgtccattacagaaggagaaactttgacacaa
gtgtcccctagctactccagcatctttggggagaaggacaaatcccttgggagaatgagt
gatcaatacaacaggttagagacttaccgggggcacagtaacaatttcccacataacaac
ccgctgagcttgtcccgggcaggattctactatgtggggcctggggaccgggtgcagtgt
ttctcctgtgggggagagttggagaattgtgagttcagggatgatcccctcacccgacac
caactatccttccctgactgtccctttgtcaaggggcaagtaaacagggaaaagttccaa
gtaagctcagtgcccattacagaaggagaaactttgacacaagtgtcccctagctgctcc
agcaaccttggggagaaggacaaatcccttgggacaatgagtgatgaacacaacaggtta
gagacttacgggggttacagttgtcgtttcccctatagcaacccgcaaagcttgtcccgg
gcaggattctactatgtggggcctggggaccgggtgcggtgtttctcctgtgggggagag
ttggagaattgggaatactgggatgtgcccttcacccgacatcaactctccttccctggt
tgtccttatgtgcgggggctagtaacaaggaaacactaccaagtacgtccaggactcctt
gcaggagatagtatgacacaagtgcaccccagcagctccaacatcttgtgggaggagaaa
ctccttagtgacatgagtgatgaatacaaaaggttagagacttaccgggggtacagtaac
aatttccagaaaaacaacccgctgagcttggcctgggcaggattctactatgtggggcct
ggggatcgagtgcggtgtttctcctgtgggggagagttggagaattgtgagttcagggaa
gatcccctcacccgacaccaactctccttccctgactgtctctatgtgctgcacaaggat
cacgctatgaaggacctgaaagcatatttacagtctcagaaattccaaaccacggcattc
tcatcttctgtaacagattatgataacagcgagcctgtgaaacggcatttcggcaagtgc
actgaccccccagtctcttccttatctagagacccacccctgaggggctgtaataaacgg
gggaagaagaaaaaaaagaagaagaaaagagttcaagaaaaaacagcttttgaagaaatg
caagcagaaactgctggggggttaacagaagaagttgccagagggttggaagacagttcc
attggaaagttggaagagagagtcactggagagttggaagtagattttgctgaatggttg
caaggtagttccgctgaagagttggaatatagttcccttgaagagttggaagatggttcc
actggagagttggaagaaggcactgtaggaaagttggaagaacacgtaatagagcaaaca
aaggagccttgtgattggtccagcagaagtgtcatggaatgtaagctctgtggaaaggtt
cctgatgcaatcaaagttcatactagaaaagatggtgataaatacagactggagttgcca
tatgaaggtcggttctgctgctcagaaacaggaatacggttctgtgtggaatccccaacc
agtattgaatttgagtttggttcctgggatgagtatttgggacatttggagcaatactcg
tatcacatagtcagccctctatttgacatcacaataaaatgtggatgggtatcagaggtg
tatcttcctcactatgtttgtctaggagggggacacgttgttactgaggagtttaaggtt
gtacattacaaagatgacaatatggtactggagacaccggcagaagttttgccattttat
gttgtactgaaacagccgaccttctccccaattgggatccttctattaaggaaattgccc
agtagagttcgacgtaacttcccgactcacggagccgtctttttatacagccgatacatc
actggttataccctccacctgtacttcatgccaatggatccctccttaaagaaggctttg
gacaaggaagagggtgaaaatggattttcctgggttgccaaaccacccaaaacaagcacg
gtgttcagccgtaggatatatattgtggaaggaccagataaggcaaaaataaagccaaag
ggtctcaggctgagttttggggactgtccagcactgtatcattacagtgagatctactta
ctgaacgtcgatgaagaactttccttgagtttgacatgcacaacaagccaaaaaggcatt
tgggatgctctactaagaagagaagacttgacgccaagatcacagatggaacgagatggg
cagcactttataaataatcaccgagcagatctgattgccagggtgtccctcattgatcct
gtactggatgatctcttgggtgataagatcctgacccaggaacaatatgatacagtgaga
agcaacagaacctcccaagagaagatgaggcaactctatgagtatgtcaggtcctggggg
aagattgaaatggagatgttctacagcacattaacagcacacaataaagcactcatcagg
gatcttctacaatga
DBGET
integrated database retrieval system
