Xenopus laevis (African clawed frog): 108704396
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Entry
108704396 CDS
T01010
Symbol
trpc3.S
Name
(RefSeq) short transient receptor potential channel 3
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108704396 (trpc3.S)
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108704396 (trpc3.S)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
MFS_4
Motif
Other DBs
NCBI-GeneID:
108704396
NCBI-ProteinID:
XP_041435519
Xenbase:
XB-GENE-6486076
UniProt:
A0A8J1M1F1
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Position
1S:54950286..55046140
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AA seq
917 aa
AA seq
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MSYKGRKCKELPAARVSFPDIGERGGWLARNGGQWAPLPQPKGVLVLPAESSSFMAGGSH
SDCYQIHSTSGDGSSSMRRVTMIRDKGRRQAVRGPAFMFNNRGPNLTPEEERFLDAAEYG
NIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKDNLARIGDALLLAI
SKGYVRIVEAILNHPAFAASKRLTLSPGEQELQDDDFYSYDEDGTRFSPDITPIILAAHC
QKYEVVHMLLIKGAKIERPHDYFCKCSDCTENQKHDSFSHSRSRINAYKGLASPAYLSLS
SEDPVHTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGD
VDAEPIESQRNRPSLSRVKLSIKYEVKKFVAHPNCQQQLLTIWYENISGLREQPIAIKCL
VVLVVALGLPLLAVGYWIAPCSRLGRILRSPFMKFVAHAASFIIFLCLLVFNASDRFEGI
TTLPNIAVIEYPKQIFRVKTTRFTWMEMLIIVWVLGMMWSECKELWLEGPREYILQLWNV
LDFGMLSIFIAAFTARLLAFMQATKAQQYVDKNIQESDLSLVTLPPEIEYFTYARDKWLP
SDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAF
MIGMFILYSYYLGAKVNSAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGYVLY
GIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSIVP
SPKSFVYFIIKIINFLKCRRRRLQKDTEIGMGDSKSRLNLFSQSTTRVFESRNFNSIINQ
PTRYQQIMKRLIKRYVLRAQVDRENDEVNEGELKEIKQDISSLRYELLEDKSQATEELSS
LIHKLSEKLNPGMLRCE
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtcatataagggccggaaatgcaaggagctgcctgcagcaagggtcagtttcccagac
attggggagcgtggaggctggttggctagaaatggggggcaatgggctccactacctcag
cccaagggagtgctggtgctgcctgccgagagcagttcttttatggctggtgggtctcac
agtgactgttatcaaattcactcaacgtcaggtgatggtagctcttctatgaggcgtgtg
accatgataagggacaaaggaagaaggcaggcagtccgaggtccagcatttatgttcaat
aacagaggtccaaatcttaccccggaagaggaacggtttttggatgcagcagaatatgga
aacatccctgtagtaagaaaaatgctggaggaatcaaagaccttgaacgtcaactgtgtt
gattacatgggtcaaaatgccctgcagctggcagttggaaatgaacatttagaagtcact
gaactgttacttaagaaggacaacttggcacgaattggtgatgctctactgcttgcaatc
agcaaaggctatgtgaggatagtagaagctatcttaaaccatccagcatttgcagcaagc
aaaagacttacccttagcccaggtgaacaggaattgcaggatgatgacttttactcctat
gatgaagatggcacacgattctccccagacataacacccatcattcttgcagcccattgc
caaaaatatgaagttgtgcacatgttgttgataaaaggtgcaaagatagaaaggcctcac
gattacttctgcaaatgcagtgactgcactgaaaatcaaaagcatgactctttcagtcac
tcgcggtcaaggataaatgcttacaaaggattagcaagtccagcctatctatcactttct
agtgaagatccagtacatacagcactggaactcagcaatgagctggcaaagttggccaac
attgagaaagaattcaagaatgactatcgtaagctgtctatgcaatgcaaggattttgtg
gttggtgttcttgatctgtgtcgagattctgaagaagtagaggccatcttgaatggtgat
gtggatgctgaaccaatagaatctcagagaaacaggccctctttaagcagagttaaactg
tcaatcaagtatgaagtgaaaaagtttgtggctcatcccaattgccagcagcagttgcta
actatctggtatgaaaatatttctggattacgagaacaacccatcgccatcaagtgtcta
gttgtactggttgttgcactagggcttcctcttcttgctgttggttactggatcgcacca
tgtagccggcttggcagaattcttcgcagtcccttcatgaagtttgtagctcatgctgca
tcatttattattttcctgtgcctgttagtgttcaatgcctcagacaggtttgaagggatt
acgactctacccaacatcgcggtcattgaatacccaaaacaaatttttagagtaaaaacg
acgagatttacatggatggaaatgcttattattgtatgggttctaggaatgatgtggtca
gagtgcaaagagctgtggctggaaggacccagggaatacatcctacaactatggaatgtg
ctggactttgggatgctctccatctttattgcagcctttacagccagacttctagccttc
atgcaagccacaaaagcacaacaatatgtggacaagaatattcaagaaagtgatctttcc
ttggtcacgctgccacctgaaatagagtactttacatacgctagagataaatggcttccg
tccgatccgcagatcatatcagaaggtctttatgccatagcagttgttcttagcttctca
cgcattgcctatatactgccagcgaatgagagctttggacccttgcagatatcacttgga
agaactgtaaaagacattttcaaattcatggttctgtttattatggtgttccttgcattc
atgattgggatgtttatcctgtattcttattaccttggtgctaaagtaaattctgcattt
acaacagtcgaagaaagttttaaaaccctcttctggtccatatttggcctgtctgaagta
acgtctgtcgtactgaagtatgatcacaaattcattgagaacattggctatgtgctttat
ggaatctacaatgtaacaatggtggtggttcttctaaacatgttaattgccatgattaac
agctcatatcaagaaatagaggatgacagtgatgtagaatggaaatttgcccgctccaag
ctgtggttatcttattttgatgatggaaaaacactgcctccaccttttagcattgtgccc
agtcctaaatcctttgtatattttataataaaaataattaactttctcaagtgcagaaga
aggcggctgcagaaagatactgaaataggaatgggagactccaagtctaggttaaatctc
ttctcccaatctactacaagggtttttgagtctcgcaattttaacagtataattaatcag
ccaacacgctatcagcaaataatgaaaagacttataaagagatatgtgttgagagcacaa
gtcgacagagaaaatgatgaagtaaatgaaggtgaattgaaggagataaagcaagatatc
tccagccttcgctatgagctcttagaagacaaatcacaagcaacggaagagctgtcctct
ttgattcacaaactaagtgaaaagctaaatccgggaatgttgagatgtgagtga
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