Xenopus laevis (African clawed frog): 108707198
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Entry
108707198 CDS
T01010
Symbol
prdm6.S
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00310
Lysine degradation
xla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108707198 (prdm6.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108707198 (prdm6.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
108707198 (prdm6.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
108707198 (prdm6.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108707198 (prdm6.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108707198 (prdm6.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_11
zf-C2H2_15
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
108707198
NCBI-ProteinID:
XP_018099773
Xenbase:
XB-GENE-17346681
UniProt:
A0A1L8HQZ8
A0A974I229
LinkDB
All DBs
Position
1S:complement(157431008..157506601)
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AA seq
538 aa
AA seq
DB search
MLKSGETVGSAFLKVDTMYLQHWQQLFPQSHIKTGVVSHVALPEPPMEPLRLRPASLSSA
SSSNSSTPSSLAGVTPIPTVLGVLQSAEAVAPHRNELGMSKCLEETPERSQCSPEDLDYY
LYGQQRMEIIPLSTPTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSTAAVAPPPE
TPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLVSPDKVQSGAVRNTQ
HLWEIYDQDGTLQHFIDGGEPSKSSWMRYVRCARHCGEQNLTVVQYRSNIFYRACIDIPR
GTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSPVIEAMSRQDTLQSFNKNGKLSSSLQR
SLVFPQTPCNRNYSLMEKSGPLDTGFNQINVKNQRILASPTSTSQLNSEFSDWHLWKCGQ
CFKTFTQRILLQMHVCTQNPDRPYQCGHCTQSFSQPSELRNHVVTHSSDRPFKCGYCGRA
FAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtccggagagactgtcggatccgcgttcttgaaggttgacacgatgtatctg
cagcactggcagcagctcttcccccagagtcacatcaagactggagttgtgagtcatgtg
gcccttcctgagccccccatggagcctctccgcctgcgcccggcatccctctcctcggcc
tcttcctctaactcttccacaccctcttctctggccggagtcacccccatacccacagtt
ctcggggtcctacaaagcgctgaggccgtggccccccatagaaacgagctgggaatgtct
aagtgcctagaggagacccccgagagatcccagtgctccccggaggatctggactattac
ctgtatggacagcaacgcatggagatcatcccgctcagcaccccgaccagcgaccccaac
aaccgttgtgacatgtgtgcagataatcgtaatggagaatgtccaatgcatggtccactt
cattctctgcgtcgcctagtgggaaccagtagcactgcagcagtggctcctccacccgaa
actcctgagtggttgcgggacctgccacgtgaggtgtgtctgtgtaccagtactgttcca
ggtctggcatacggcatttgcgcagctcagagaattcaacaaggaacatggattggaccc
ttccagggagtccttgtttctccagacaaagtgcagagcggggctgtacgaaacacacag
catctctgggaaatatatgaccaagatgggactctacagcattttattgatggaggagag
cctagtaagtcaagctggatgaggtatgtccgatgcgctagacactgcggggaacagaat
ttgacagtagttcagtacagatcgaatatattttatagagcttgtattgacatcccaaga
ggcacagaactgttggtctggtacaatgacagctacacatcattctttgggattccattg
cagtgcattgctcaggatgaaaacttgaatgttccttcaccagttattgaagcaatgtca
cggcaagacacattacaatctttcaacaaaaatggcaagttaagcagctcattgcaaagg
tccctagttttcccacagactccatgcaatagaaattattctctaatggagaaatctggg
cctctggacacaggatttaaccagatcaatgtaaaaaaccagcgaatacttgccagtcct
acctcaacaagccagctaaactcagaattcagtgactggcatctttggaaatgtggacaa
tgctttaagactttcacccaacgaattcttctacagatgcatgtgtgcacccagaaccca
gacaggccttaccagtgtggacattgcactcagtccttctcccagccttcagaattaagg
aaccacgtcgtcacccactccagcgatagacccttcaagtgtggctattgtggcagagcc
tttgctggggcaactacattaaacaatcatatccggacgcacacgggcgaaaagccattt
aagtgcgagaggtgcgagaggagcttcacacaggccacccagctgagtcgacatcagaga
atgcccaacgagtgcaagcccataacagagagcacagaatcaattgaagtggattaa
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integrated database retrieval system
