Xenopus laevis (African clawed frog): 108707608
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Entry
108707608 CDS
T01010
Symbol
trim26.L
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108707608 (trim26.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108707608 (trim26.L)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
108707608 (trim26.L)
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108707608 (trim26.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
LDcluster4
Motif
Other DBs
NCBI-GeneID:
108707608
NCBI-ProteinID:
XP_041438825
Xenbase:
XB-GENE-17336280
UniProt:
A0A8J1MCL5
LinkDB
All DBs
Position
2L:190882445..190930299
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AA seq
1500 aa
AA seq
DB search
MGNTKSKSSVPDGIDGVQLHSNVNSPHRPGTADPKKKKKTAPKFIDGEKVDVLNSWVSQN
IRKKECVAFIPRVSEAPSDRDSCSCGHTRHTHFGDHKSSSVEPGTVWDPHKHVREFPSDA
HGDLTFTGTTRTWAKYVRASNDTPPRLLFDLMTQQWDLSVPNLLISVTGGAKNFNISPRL
KTEFSRGLVTAAQSTGAWIITGGSHAGVMKHVGEAVRDFSGGQHESDIVLIGIATWGIVH
NRELLISEAGGAPAVYQMDEGSQGSLCCLDNNHTHFILVDNGTFGRYGVEIPLRAKLEKY
ISAQTMEKAGTAIKIPIVCVVLEGGPGTLDTIYNSMCNNTPCVIVEGSGRVADIIAQVAN
LNISRITISLVKEKLQNLFQDTYESFTEAQIIMWTKKIQDIVRMGSLLTILREDKTEEQG
MDVAILQALLKASRSTDLSGQENWDHQLKLAVAWNRPDIAESQIFTEDWMWKPSDLYPSL
MVSLIDDKPSFLRLFLERGVSLSEFLTWDVLTELYNNTEPSSLIRSKLERQAMLDESTEI
NGPTIQLHHVSRVLQELLGGRTEPLYPDVRSHRTRNLPHIKIKISGKVSSMRLASDCTLQ
LEHPVRDLLIWCIVQNRAELAEIIWCQSQDCIVGALACSKILKALSKEEDDTESMENMKV
LADVYEERAAGVFSECYESDESRAEQLLIRVSSIWGKTTSLDLAQESQGQAFMSQGGVQM
FLNKTWCGKLSVDNGLLAILLCMLLFPLIYTGLVMYRNKPLAPRSSRRPDINGQMKSPVR
SSQTRNCLKKFLHFFTAPIVKFYYNVVSYIGFLWLFAYVLMMDFQTSPSWREYLLYIWVF
SIFCEELRQLLYDPDRLGFVVKSAQYISEFWNQIDSTALVLFAVGLICRLASVDTVYLGR
VFLSIDFMIFCVRLLHIFTVSKVLGPKIIMLRRMVMDLFFFLFLLAIWIVSYGVAKQAIL
TSNEIRLNWIFRNIVYEPYLTLFGQMPSDIDGLNFDPTKCSQDGTNPLLPKCVYNDGSGN
PLFPEWLTIILTCIYLLMANILLLNLLIAMFSNTFGDVESHTDQIWKFYRFGLIKEYNER
PAAPPPFILLSHFYFLLKYGLSKRSTMSHKAMRSVIDEAGESSLLSWELYMRDNYVHNRQ
LLDAQSQENVVKNTAESVSAVLKMLSMEKGSDGQNMERRMFLLEDEVSKSSQKLQWIISA
LREKGFTGKAQMFVHSNSQDLEEKASLGSDSLGDKKSIYHVNSRTLQYPNSNTTRYPVPD
EMVPWEVTFPGYDPPFLIADRDDRGAYDPHSEMSQTNRKYNGVDGALDFRSSCGTYLVHE
GVPLNPMGRTGLRGVGSLRWFGPNHSLHPVITRWNTLPNGSLDRKISRKKLEVLVVKQID
NELWALPGGTLSPGEDIPPKLKSILNEKYVKKFSDLLRGGTEVFRGYLDDPRNTDNSWIE
TRAVNIHMDSDEKLSRFLQNVNDSSPGVSLRWQILDHKIPIYADEKEILQRTAEVHGTHY
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacacaaagagcaaatcttctgttccggatggaattgatggagtccagctacac
agcaacgtaaactcacctcacagacccggcactgccgatccaaagaagaagaagaaaact
gcacctaaattcattgatggggagaaagtagatgtcctaaactcatgggtgtctcaaaac
atcaggaagaaagagtgcgtggccttcatccctcgagtctctgaggctcccagtgacagg
gattcatgcagctgtggacacaccagacacacacattttggagaccataaaagttcttca
gtggaacccggtactgtgtgggacccccataaacacgtccgagagtttccttcagatgcc
cacggagacctgactttcactggcacaacaaggacttgggcaaagtacgtacgagcctcc
aatgatacccctcctcgcttgctctttgacttaatgacccaacagtgggacctcagtgtc
cccaaccttctcatctctgtcactggaggagccaagaacttcaacatcagccccagactc
aagactgaattcagccgggggctcgtgacggcagcacagagtactggtgcctggatcatc
acaggcgggtcccatgcgggtgtcatgaagcacgtcggagaggctgtgcgggatttcagt
ggaggccaacatgagtctgacattgtgctcattggcattgccacctggggcatcgtacac
aacagggagttgctgatcagtgaggcgggaggagcccccgctgtttatcagatggacgag
ggatcacaggggtcgctctgctgcctagataataaccacacacatttcattctggtggat
aatgggacatttggaagatatggagttgaaattcccctgagagccaaactggagaaatac
atctcagcgcaaacgatggagaaagcaggaacagccataaagatccctatagtttgtgta
gtgctggaaggaggacccgggacactggatactatctacaattccatgtgcaataacaca
ccgtgtgtgatagtggagggctctggccgtgtggctgacatcattgcccaggtggccaat
ctgaatatttccagaattaccatctctctggtcaaggagaagctgcagaacctcttccag
gacacttacgaaagcttcactgaggcccagatcatcatgtggacaaaaaagattcaggac
attgtccgtatggggtcgctcctcaccattcttcgagaagataaaactgaagaacagggg
atggacgtggcgattcttcaggcattgctgaaagcttctcggagcactgacctctcaggg
caggagaactgggaccatcagctcaaactggcagttgcgtggaaccggcctgatatagct
gagagccaaatattcactgaagactggatgtggaagccttcagacctgtatccatccctg
atggtctcactaattgatgataagccttcctttcttcgtttatttctggaacgcggtgtg
agtctgtccgagtttctaacgtgggatgtattaactgaattatataacaacactgagcct
tcgagtctgattcgcagcaaattggagcgacaggccatgttggacgagtcaacagaaata
aatgggccgacgatccagctccatcatgtgtcccgtgtcctgcaggagcttctgggggga
cgtactgagccattgtatcctgacgtgaggtcccatcggacacggaatttgccacacatc
aaaattaagatatcagggaaagtatcgtctatgaggttagcatcggattgtacactgcaa
ctggagcaccctgtccgagacctgttaatctggtgtattgtgcagaaccgagcggagctg
gcagagatcatatggtgccagtcccaggactgtatcgttggagctctggcctgcagtaag
atcctcaaagctctctccaaagaggaggatgacacagaaagcatggagaacatgaaagtg
ctggctgacgtttatgaggaaagagcagcaggggtcttttctgagtgttatgaaagtgat
gagagtcgggctgaacaacttctcattcgcgtctcttccatatggggaaaaacaacctcc
ttggaccttgctcaggaatctcagggacaagccttcatgtcccagggtggggtacagatg
ttcctcaataagacctggtgtgggaaactctcagtggacaatgggcttctggccattctc
ctgtgtatgttgctcttccctctcatatacactggccttgttatgtacaggaacaaacca
ctggccccgcggagcagtcgcagaccggacattaacggacagatgaaatcgccagtcaga
agctcacagacacgcaactgtctcaagaagttcttgcatttcttcactgctcccattgtg
aagttctactataatgttgtgtcctacattggcttcctttggctttttgcctatgtcctg
atgatggatttccagacttccccttcatggagagaatatcttctatacatttgggtcttt
tccatcttttgcgaggagcttcgccagttgctgtacgacccagacaggcttgggtttgta
gtgaaatctgctcaatacataagcgagttctggaaccagatagattcaacggctctcgtc
ctatttgcagttggtctcatttgcagattggcaagtgtggatacagtttacctgggccgt
gtttttctgtccatagacttcatgatattttgtgttcgtcttctgcacatctttacagtg
agcaaagttcttggtcccaagatcataatgcttcgtcgcatggtaatggatttatttttc
ttccttttcctcctggctatttggatcgtatcatatggagtagcaaagcaggccatactg
accagcaatgaaatcaggttgaattggatcttcaggaatattgtctatgaaccttatctc
actctctttgggcaaatgccatctgatatcgacggcttgaactttgatccaacaaaatgt
agccaggatggcacaaatcccttactgcccaaatgtgtgtacaatgatggttctggaaac
cctctctttcctgaatggctgacaattattttaacgtgtatttacttgctgatggcaaac
atccttctgttgaaccttctcatcgctatgttcagtaacacattcggagatgtagaaagt
cacacagatcagatctggaagttctaccgctttggcctaataaaggaatataacgagcgc
ccagcagctccgccacctttcattctgctgagtcatttctactttctcctgaaatacggg
ctcagcaaacgttccaccatgagccacaaagccatgagatctgtaatagatgaagcagga
gaatcatctcttctctcgtgggaattgtacatgagagacaattatgtgcataaccggcag
ctgttggacgcacagagtcaggagaatgttgtgaagaacacggctgagagtgtctctgct
gtgctaaaaatgctcagtatggagaaaggcagtgacgggcagaacatggagaggaggatg
ttcctactggaagacgaggtttccaaatcttctcagaaacttcaatggatcatatcggcc
ctgcgtgagaaaggttttactggcaaagcccagatgtttgttcacagcaactctcaggat
ttggaggagaaggcctctcttgggtcagattctttaggggacaaaaagtctatttatcat
gtaaatagcagaaccctgcagtacccgaactccaacaccacacgttacccagtcccagat
gagatggtgccgtgggaggtgacattcccaggctatgaccctcccttcctcattgcggac
agagatgatcggggggcctatgatccccattcagagatgtcacagaccaataggaaatac
aatggagtggatggtgcgttggatttccggagctcatgtggtacataccttgtacatgag
ggggtcccactgaacccaatgggtcgaacaggtctgagaggagttggaagtcttcgttgg
tttgggccaaatcattctctgcacccagtaataacccgctggaatacactgcccaatggc
tctctggacagaaagatttcacggaagaagctggaggttttggttgtgaaacaaatagac
aatgagctgtgggcactgccaggggggactctgagcccaggagaagacattcctcccaaa
cttaaatctattctcaatgagaaatatgtgaaaaagttctcagatctcctcagaggtggg
acagaggtgtttcgggggtatctagatgacccgaggaatacggacaattcctggattgaa
acacgggctgtaaatattcatatggactcagacgagaaactgagtcgattcctacagaat
gtgaatgactccagccctggggtttctctccgctggcaaatcctggaccacaagatccca
atctatgcggatgagaaggaaattctccagagaacagcagaagtgcatgggacacattac
taa
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