Xenopus laevis (African clawed frog): 108707884
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Entry
108707884 CDS
T01010
Symbol
tiam1.L
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04530
Tight junction
xla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108707884 (tiam1.L)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108707884 (tiam1.L)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
PDZ_2
SOS1_NGEF_PH
PDZ_6
PH_11
Motif
Other DBs
NCBI-GeneID:
108707884
NCBI-ProteinID:
XP_018101435
Xenbase:
XB-GENE-17333531
UniProt:
A0A8J0U5C7
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Position
2L:15173482..15402123
Genome browser
AA seq
1609 aa
AA seq
DB search
MLSDARRLFILLQKVKNMGNAESQNVEQALYGKEHGGTLGRKHTSRSLRISNKNSRRTRH
ASSGKPVHRNSEVSNRSSSTPSIPQSLAENGMEPYSQDANLDDFDSRDWVDMGLRPVSYH
TDSSVTPSLNSSTVLTAASMQSMQDCEESRLYGEDHSYFPDGNGRAQIYTTNGPNLLDAA
SFKKKRSKSADIWREDSLEFSLSDLSQEHLTSTEEILCSTEEKDCEETIIAEAGNNGKLN
SCQRANSLTDLYPQNIPHASVNGAPRSKFMVYCRNLVSHSPESENYKMDPTSAEETPPYS
NYNTLPCRKSHCLSEGAANLKLSHSNSMHGRRAKTTQDVNTGGEGSEFTDSGIEAATTDT
DIISRRSNVTRSSYSPTASRVFIGSDSGSSSTGDALRQGVYENFRRELEMSRASRENLEE
ASSALSDEQSSGTLSSPGQSDILRTAAQGTVRKAGALAVKNFLVHKKNKKVELATRRKWK
QYWVSLKGCTLFFYETDGRSGIDNNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGD
AFLFQTTSQTELDNWITAIHSACATTVARQHHKEDTVKLLRSEIKKLEQKIDMDEKMKKM
GEMQISSVTDAKKKKTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFA
SRPTKVAMGRLNIFSVSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTS
KKKQGRTSVTQVFSDGSESVKKSLEGIFDETMSEDKKEKEVTLSSVHPHNPDTDIWVHDY
LTPSWVCLPNDQPVLIVIHPDDTAKDALEIICKTHQLDYTSYYLRLKFLMDSQTQLYIPK
PEEEIYELLYKEIEICPKITKHIQMEKGGSTSESFGFSLSAVEEDGRHHLYVNNVKESGL
AFKKGLKVGDEVMEINSKPARELNSSVLKHILGKSSLYLTVRSCPDTGDSPCSLEALPRR
SETDCNDFLLLSNRVFSETDSCSETAPEEIEVQLDTPDDADSINKSTEQVAAFRRSPHEM
NSPDSCLTPSEFTGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQK
ETFLTQDELDVLFGNLLEMVEFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLFSLGGSF
LYYADRFKLYSAFCASHTKVPKVLVKAKTDSNFKAFLDAQNPKQQHSSTLESYLIKPIQR
ILKYPLLLKELFSLTDAESEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQ
SGEVKEVADLSMGDLLLHNSVIWLNPPASLGKWKKDPELETFVFKAAVVLVYKDSSKQKK
KLGGSHRASMFEDRDPFRFRHMIPTEALQVRAMTTSDAETNSVCEIVHVKSESEGRPERA
FHLCCSDPGRKKELLRAVHSILRDKHRRQLLKTESLPNSQQYVPFGGKRLCALKGARPTM
NRAVSAPSRSLARRRRLVRNRFTIDSDTIFTDPDKDSDQETEPSPPQQSSNSGDTDRWVE
EQFDLAQYEEQDDVKETDILSSDDEYCESIKGGSIEKDLSEQLEATSLSSNPVATKVQNT
MNSHASRMAQLKKQIAFSGMNGSIESNAEEVIWVKREDFVPVRKLNTEI
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atgctgagtgatgctagacgcctttttattttgctacagaaggtcaaaaacatgggaaac
gccgaaagccaaaatgtagaacaagctttgtatgggaaagagcacggcggcactttgggt
cggaagcacacgtctcgctcactccgcatttccaataagaattctcgcaggacccgccat
gcttcatcagggaaaccagtgcatcggaattccgaagtcagtaacaggtcaagcagcacc
cccagcatccctcagtctttagcagaaaatgggatggagccgtactctcaagatgccaac
ctggacgactttgacagccgggattgggtagatatgggtttgaggcccgtttcttatcat
acagattcttcagtcaccccgagtttaaacagcagcaccgttctcaccgcagcctccatg
cagagcatgcaggactgtgaagaaagtagactttatggcgaagaccactcttattttcca
gatggcaatgggcgagctcagatctacaccacaaatgggccaaacctcttggatgcagca
agttttaagaagaagcgttccaaatcagcagatatatggagagaggacagcctggagttt
tccctttccgatctgagccaagaacacttaaccagcacggaggagattttatgctccacc
gaagagaaagactgtgaggagaccataatagccgaggcaggtaataacggcaagctgaat
tcctgccaacgtgccaattccttaacagatttgtatccgcaaaatatcccacatgcgtct
gtcaatggcgcaccaaggagtaaatttatggtctactgtcggaatttagtgtcccactcg
ccagaatcggaaaattacaaaatggaccccacttctgccgaagagactccaccttacagc
aattataacactcttccttgtcggaagtcccattgcctttctgaaggtgccgcaaacctg
aaactcagccatagcaacagcatgcatggccgaagagcaaagacaactcaggatgtaaac
acaggaggggaaggcagcgagttcaccgacagcggcattgaggctgctaccactgataca
gacatcatatccagaagatcaaatgtcaccaggtcgagttactctcccacggccagccga
gtgttcatcgggagcgacagtggcagcagctcgactggagatgcgttacgccaaggcgtc
tacgagaacttccgtcgggagcttgagatgagcagggccagcagggagaacttagaagag
gccagttcggcacttagcgatgaacaaagcagtggcactttaagttcccccggccaatcg
gacattctccggactgcagcccaagggacggtgcgcaaagccggggcattagcagtcaag
aactttctggtgcacaaaaagaacaagaaggtggaacttgccacacgcagaaaatggaaa
cagtactgggtctctttaaaaggctgcacgttgttcttttatgagacggacggtcgatca
ggaatcgacaacaacagtatcccgaagcatgccgtgtgggtggagaacagcattgtgcag
gccgtgcctgagcacccgaagaaagactttgtcttctgcctgagcaactctctgggggat
gccttcctttttcagacaaccagccagacggagctagacaactggatcacagccatccat
tctgcctgtgccaccacggttgcgaggcagcaccataaagaggacaccgtcaaactttta
aggtcggaaataaagaaactggagcagaagatcgacatggacgaaaagatgaagaagatg
ggcgaaatgcaaatatcctctgttacagacgctaagaagaagaaaaccatcctggatcag
atctttgtctgggagcagaacctcgagcagttccagatggacctattccggtaccgctgc
tatctagccagccttcaggggggagagctgccaaaccccaaacgccttcttgcttttgca
agccggccaactaaagtagccatgggccgcctcaatatcttttccgtctcctccttccat
gctctggtggctgcacgcaccggagagtctggagtaagacggcggacgcaggccatgtcc
agatctgcgagcaagaggaggagccggttttcttctctatgggggcttgacacaacttct
aagaagaaacagggaaggacaagcgttacccaggtgttcagtgacgggtctgaatcggtc
aagaagtctctggaaggcatctttgatgagacaatgtcagaagacaagaaggaaaaggag
gtaacactgagtagcgtccatcctcacaatcctgacacagacatatgggtccacgattac
ctgactccatcctgggtttgtctgcccaacgaccagcctgtgcttatagttatacatcct
gatgatacagcgaaggatgccctggagattatttgtaagactcatcagttggattacacc
tcctattatcttcgactgaaattccttatggacagtcagacacagctctacatccccaaa
cctgaagaggaaatctatgagctgctttataaagaaattgaaatctgcccaaaaatcaca
aagcacatccagatggagaagggaggcagtacctcggaaagctttggattttctctctct
gcagtggaggaagatggaaggcatcacctttatgtcaataacgttaaggagtcgggcttg
gcgtttaagaaaggcctgaaggtgggagacgaggtgatggaaataaactctaagccagcc
cgtgagctgaattcttctgtactaaaacatatcctgggcaaatcgtctttgtacctgaca
gtgcgctcgtgtccagacacaggagacagtccgtgttcattggaggccctgccccgacgc
tcagagacagactgcaatgactttcttctgctgagtaatcgagtcttcagcgagaccgac
agctgcagcgagacagccccggaggagatagaagtgcagctggatacgcccgacgacgcc
gattccatcaacaaaagcaccgagcaggtcgctgccttccgtcgcagtccgcatgaaatg
aattctcccgactcctgcctgactccgtccgaattcacggggccgcagctcgccaccatg
agacaacttacagatgccgataaactgcgcaaggtcatctgcgagctcctggagacggaa
cgcacatacgttaaggatttaaactgtctcatggaacggtatctgaaacctctgcagaaa
gagacatttctcacccaggacgagctcgacgtgctctttgggaatctattggagatggta
gaatttcaggtcgaattccttaaaactcttgaagatggggtgagacttgtaccggacctg
gaaaagctggaaaaagttgaacaattcaagaaagtcttattttccctgggtggatccttt
ctctattacgccgaccggttcaagctgtacagtgccttctgcgccagtcatacaaaggtc
ccaaaagtgttagtcaaagccaagaccgactctaacttcaaagcgttccttgatgctcag
aatcccaagcagcagcattcgtccacgctggagtcctacctgattaagccaatccagcgc
atcctcaaataccctctgctgctcaaagaactcttttccctgaccgacgctgaaagtgaa
gaacattatcatcttgatgtggcaatcaaaaccatgaacaaagtggccagccacataaat
gagatgcagaaaatccacgaggaatacggagcggtgtttgatcagctcatagcggaacag
agcggggaagtaaaagaggtggcagacttgtccatgggagacctgctgttacacaactca
gtcatttggcttaatccacctgcatccttgggaaagtggaaaaaggaccccgaactggaa
acatttgtctttaaggctgccgtcgtgttggtttacaaggacagctcgaagcaaaagaag
aagctgggtggatcccatcgagcgtccatgtttgaagatcgagatccgtttcgcttccgt
cacatgattcctacggaggcgttgcaagttcgagccatgaccacttctgatgcggaaacc
aactctgtctgtgagattgttcatgtgaaatccgagtcagaggggagaccagagagagcc
ttccacttgtgctgcagtgaccctgggcgtaagaaggagctcctgagagccgtgcactcc
attctgcgggataagcaccggcggcagctgctgaaaacagaaagtctacccaactcccag
caatacgtcccgttcggagggaagagactgtgcgcattgaaaggtgcccgtcccaccatg
aaccgagcagtttcagcgcccagcaggtccctcgccaggcgaaggcgactcgtgagaaac
cgtttcacaatcgattctgacaccatcttcaccgaccccgataaagattccgaccaggag
actgagccctcccctccccagcagtcgtcaaacagcggcgacacggatcgctgggtggaa
gagcagtttgacctggcgcagtacgaagagcaggacgacgttaaggagacggacatactg
agtagtgacgatgagtactgtgagtctataaaggggggttccatagaaaaggatctgagt
gagcaacttgaggccacctctctttctagtaacccagtggctaccaaagtccagaacaca
atgaattcgcacgcctctcgtatggctcagctgaagaaacaaatcgccttttccggcatg
aacggcagtattgagagcaacgcggaggaagtcatttgggtgaaacgggaagactttgta
ccagtcaggaaactcaacactgagatctag
DBGET
integrated database retrieval system
