KEGG   Xenopus laevis (African clawed frog): 108708200
Entry
108708200         CDS       T01010                                 
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    108708200
Enzymes [BR:xla01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     108708200
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     108708200
   Histone demethylases
    108708200
SSDB
Motif
Pfam: KDM6_C-hel JmjC KDM6_GATAL TPR_1 TPR_2 TPR_8 TPR_17 TPR_16 TPR_12 TPR_7 TPR_19 TPR_CcmH_CycH TPR_9 TPR_11 SNAP ARM_TT21_C ANAPC3
Other DBs
NCBI-GeneID: 108708200
NCBI-ProteinID: XP_041438041
UniProt: A0A8J1M9L1
LinkDB
Position
2L:83213788..83291686
AA seq 1467 aa
MKSCGVSLSAAVVVVAAASLGDEKKKMAAGKASETEEDFPNLTAEEREALVGLDSRLYGF
LRLHEDGARTKALLLKAIRCYEALILKSEGKVESDFFCHLGHFNLLLEDYPKALSAYQRY
YSLQSDYWKNAAFLYGLGLVYFHYNAFHWAIRAFQEVLYVEPSFCRAKEIHLRLGLMFKV
NTDYESSLKHFQLALIDCNPCNLSKTEIQFHIAHLYETQRKYHSAKEAYEQLLQTENLPT
QVKATVLQQLGWMHHTVDQLGDKATKASYAIQYLQKSLEADPNSGQSWYFLGRCYSSIGK
VQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLG
TLYESCNQPQDAIKCYLNATRSKNCNNTSALAARIKYLQAQLCNLPQGSLQNKTKLLPSI
EEAWSLPIPAELTSRQGAMNSAQQACKPHHQNAESVLGLSQTPISQLSLPLHMIPSSQVD
ELSSPAKRKRASSPAKNASETWSSGHLMSHTSGQQQVHSWCLPPHKIQQLEQLRANRNNL
NPAQKAALEQLEAQYVLMQQQMRQTGVSQVRSTGIANGPTADSTLPTNSLSGQQHQVALT
RMPNAAQPGIRPTCPAQPVANGPFPVGQVSCSTIGTVGSTDTMLIGNNHITGNGSNGNVP
YPQRNALALPHNRTNLTSSAEEPWKNQLTNSTQGLHKGQSSHLAGPNCERPPSSTGPSQH
LQAAGTGIQNQVGHPTMPSNSVTQGAALNHLSSHTATSGGQQGIILTKESKPSGNGSVPE
TSRHSEGTPNSTAGVEGLPNHVHQVVADTVPSPSHGDSKSPGLLSSDNPQLSALLMVKAN
NNVGPGTCDKVNNVHPAVHTKTENSVASSPSSAISTATPSPKSAEQTLTNSVVSLKSPLS
GLDKVNGEQAEDSQSPTKKDHPLTSHKLSPQTIPSMSVSIYPSSTEVLKACRNLGRNGLS
NSSILLDKCPPPRPPPPPYPPLPTDKLNPPTPSIYLENKRDAFFPPLHQFCTNPNNPVTV
IRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQLLQPADENWDPTGTKKIWRCESSRSH
TTIAKYAQYQAASFQESLREENDKKIQHKDHSDSESTSSDNSGRRRKGPFKAIKFGTNID
LSDERKWKLQLHELTKLPAFARVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQEN
NNFCSVNINIGPGDCEWFVVPETYWSVMHDFCEKNNINFLLGSWWPNLEDLYEANVPVYR
FIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTAFQYKLAVERYEWNKLQCVKSIVP
MVHLSWNMAKNIKVSDPKLFEMIKYCLLRTLKHCQALREVLIAAGIEIVWHGRTKEEPAH
YCSICEVEVFNLLFVTKESNSQKTYVVHCHDCSRKTCPNLENFVVLEQFRMEELMQIYDL
FTLNSKGQASTFIYSHMKKFGNPSQPA
NT seq 4404 nt   +upstreamnt  +downstreamnt
atgaaatcgtgcggagtgtcgctctccgccgcagttgttgtcgtcgccgccgcctccctc
ggtgatgagaaaaagaaaatggcggcgggaaaagcgagcgagaccgaggaggacttcccc
aacctgacagcagaagaacgagaagcactggtcgggctcgacagccgactttatggattt
ttaaggcttcatgaagatggcgccagaacgaaggccttgctactaaaggctattcgctgt
tatgaggctctgatattaaaatcagagggaaaagtggagtctgatttcttctgtcattta
ggccatttcaacctgttgttggaagactatccaaaagcattatctgcataccagaggtac
tacagtttacaatcggactactggaagaatgctgcctttctttatggccttggtttggtc
tacttccattacaatgcatttcactgggcaattagagcatttcaggaagtgctttatgtc
gaacccagcttctgtcgcgccaaggaaattcatttacgacttggactgatgttcaaagtg
aatactgattatgagtcaagtttaaagcattttcagttggctttgattgactgtaatcct
tgcaatttgtccaaaactgagattcagtttcacattgctcacttgtacgaaacacagaga
aagtatcactctgcaaaagaagcttatgaacagcttttgcaaaccgaaaaccttccaact
caagttaaagctacggttttacagcagttaggttggatgcatcacaccgttgatcagctg
ggagacaaagccacaaaggcaagctatgctattcagtatctacagaaatctttagaagcc
gatcccaactctggtcaatcctggtatttccttggaaggtgctattccagtataggcaaa
gttcaggatgccttcatatcctataggcagtctattgataaatctgaggcaagtgcagat
acttggtgttctataggtgttctctatcagcagcagaaccaacctatggatgctctgcag
gcttacatatgtgctgttcagttggaccatggtcatgctgcagcctggatggatttaggc
acactatatgaatcctgcaatcagcctcaggatgctatcaaatgctacctaaatgcaaca
aggagcaaaaactgcaacaatacctctgcacttgcagcaagaatcaaatacttacaggct
cagttgtgtaaccttccacaaggtagtctacagaataaaactaaattgcttcctagtatt
gaggaggcatggagcctaccaatcccagcagagcttacctccaggcagggtgccatgaac
tcagcacagcaggcttgtaaacctcatcatcagaatgctgaatctgtactaggcctcagt
caaacaccaatttcacagctgtccttgccattacacatgattccttctagccaggtagat
gaactgtcaagtcctgccaagaggaaaagagcatctagtccagcaaagaatgcttctgaa
acctggagcagtggccatttgatgtcacatacttcaggacagcaacaagtacattcgtgg
tgtttgccaccacacaaaatacagcaattggaacagctacgagcaaacaggaataaccta
aatccagcacaaaaagcagcgttggagcagttggaggctcaatatgtcttaatgcaacag
caaatgagacaaacaggagtttcacaggtacgttctactggaattgctaatgggccaact
gctgactcaacactgcctacaaactcactctctggtcagcaacatcaggttgcattaacc
aggatgcctaatgccgctcagcctggaatccgtccgacttgccctgcgcagcctgtggct
aatggaccatttccagtaggccaagtttcctgcagtaccatagggacagtgggcagcaca
gacactatgttgataggcaataatcatataacgggaaatggaagtaatggaaatgtgcct
tacccgcagcgaaatgcactcgcactacctcataaccgcacaaacctgaccagcagcgca
gaggagccgtggaaaaaccaactaactaactccactcaggggcttcataaaggtcagagt
tcacatttggcaggtcctaattgtgaacgacctccttcttccactgggccttcccagcat
ctccaagcagctggcactggtatacaaaatcaggttggacatcctaccatgcctagcaat
tcagtaacacagggggctgctctcaatcacctctcctctcacactgctacctcaggtgga
caacaaggcattattttaaccaaagagagcaagccttcaggaaatggatcagtgcctgaa
acaagcaggcattctgaggggacacctaacagcactgccggtgtagagggacttcctaat
catgtccatcaggtggtggcagacactgttcctagccctagccatggagactcaaaatca
ccaggtttacttagttcagacaatcctcagctctctgccttgttgatggtaaaagccaat
aacaatgtaggtcctggaacctgtgacaaggttaacaacgttcatccagctgttcataca
aaaactgagaattctgttgcctcctctccatcttcagccatttccacagcaacaccttct
ccaaaatctgccgaacagactttgaccaacagtgttgtcagccttaaaagccctctcagt
ggacttgacaaagtaaatggtgagcaagcggaggactctcagagccccacgaaaaaggac
caccctttaactagccacaaattaagtccccagaccataccatccatgtctgtatcaatt
taccctagctcaacagaggttttaaaagcatgtaggaatctgggtagaaatgggttatca
aacagtagtattttactggacaagtgcccacctccaaggccgccaccaccaccctatcca
cctttaccaacagataaattaaatcctccaacaccaagcatttatttagaaaacaagaga
gatgctttcttcccaccactccatcagttctgcacaaatccaaacaaccctgttactgtc
atacgtggccttgctggagctcttaaattagatctaggactcttttctacaaagacatta
gtagaagcgaataatgaacatatagtcgaagtgaggacacagttattacagcctgcagat
gaaaactgggaccccactggaacaaagaaaatctggcgctgtgaaagcagtcgttctcat
accaccattgcaaaatatgcacagtatcaggccgcttcattccaggaatccttaagagaa
gaaaatgataaaaaaatccaacacaaagaccactccgatagtgaatccacatcttcagat
aactctggtagaagacgaaaaggccctttcaaagccattaaatttgggaccaatattgat
ttgtctgatgaaagaaagtggaaactacaacttcatgaactgacaaaacttcctgccttt
gcacgtgttgtgtcagctggaaatcttctgagtcacgttggtcatactatactaggaatg
aacactgttcaactttacatgaaggttccaggcagtaggacaccaggccatcaagaaaac
aacaacttctgttcggttaatattaatattggcccaggagattgcgaatggtttgtcgta
cctgaaacgtactggagtgtaatgcatgacttctgtgaaaagaataatataaacttcctt
ttgggatcatggtggcccaatctagaagacctctatgaagcaaatgtgcccgtctacagg
tttatccaaaggcctggtgacttagtttggattaatgctggcacagtgcactgggttcaa
gcaattggttggtgcaacaacattgcatggaatgttggccctctcacagccttccagtat
aaactggccgtggaacggtatgaatggaataaattgcagtgtgtcaagtctattgtacca
atggttcatctctcttggaatatggcaaagaatatcaaagtttctgatccaaagcttttt
gaaatgattaaatattgcttattgcggactttgaagcattgccaagcactgagagaagtt
ctaattgctgctggaatagaaattgtgtggcatggcagaacaaaagaagaacctgctcat
tactgtagcatctgtgaggtggaagtcttcaatctactttttgtgacaaaagagagcaat
tctcagaagacctatgtagttcattgccatgactgctcaagaaaaacatgcccaaaccta
gaaaattttgtggtgctagaacagttcagaatggaggagctgatgcagatctatgacctt
tttacattaaattcaaaaggacaagcctctactttcatatacagtcatatgaaaaagttt
gggaacccctctcagcctgcataa

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