KEGG   Xenopus laevis (African clawed frog): 108708738
Entry
108708738         CDS       T01010                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'-like
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108708738
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    108708738
   03041 Spliceosome [BR:xla03041]
    108708738
   03032 DNA replication proteins [BR:xla03032]
    108708738
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     108708738
Spliceosome [BR:xla03041]
 Complex A
  U1 snRNP components
   Sm proteins
    108708738
  U2 snRNP components
    108708738
 Complex B
  U1 snRNP components
    108708738
  U4/U6.U5 tri-snRNP components
    108708738
 Complex C
  U2 snRNP components
    108708738
DNA replication proteins [BR:xla03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     108708738
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 108708738
NCBI-ProteinID: XP_041438628
UniProt: A0A8J1MAK6
LinkDB
Position
2L:172410023..172410802
AA seq 206 aa
MTVGKSSKMLQHIDFRMRCILQDGWIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIAPAGLAGTVRGVGGPSQQVMTPQGHGNV
VAAAAAATASITGAPTQYAGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGMPPGSGG
PMGMLPPGMRPPPPGPPPPGMRPTRP
NT seq 621 nt   +upstreamnt  +downstreamnt
atgacggtgggaaaaagcagcaagatgctgcagcacattgacttcagaatgcgctgtatc
ctgcaagatggctggatctttattggaacattcaaggcatttgacaaacacatgaatctg
atcttatgcgactgtgatgaatttagaaagattaagccaaagaattcaaaacagccagaa
cgtgaagaaaagagggtacttggtctagtgttgcttcgaggggagaacttggtttcaatg
actgttgaaggcccacctcccaaagatactggtattgctcctgctggactggcaggaaca
gtacgtggcgttggaggaccttcacagcaggttatgacacctcagggtcatggtaatgtg
gtggcagctgctgcagccgccacagcaagcattactggggccccaacacagtatgcaggt
cgaggaggaccacctccaccaatgggcagaggagcacccccaccaggcatgatgggacca
ccccctggcatgaggccaccaatgggtccaccaatgggaatgcctccaggcagtggagga
cctatgggaatgttacctccagggatgagaccacctccacctggacctccaccacctggc
atgcgacccactcggccataa

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