Xenopus laevis (African clawed frog): 108709438
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Entry
108709438 CDS
T01010
Symbol
pkp1.S
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
108709438 (pkp1.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
108709438 (pkp1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
HEAT_EZ
HEAT_2
Atx10homo_assoc
LTN1_E3_ligase_6th
V-ATPase_H_C
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
108709438
NCBI-ProteinID:
XP_018104735
Xenbase:
XB-GENE-17337764
UniProt:
A0A8J0UK32
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Position
2S:complement(55380361..55421810)
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AA seq
755 aa
AA seq
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MLASPSPLKTALASDVFLWPNESSLAVPSDKCLRGGVSKDQRVKEQVMMTVKRHKSRSST
SNSGYRGSMYDTMADYNNMNLSSNANHYSKYQSANSTGHQYNGTLKKDQQRFSCYSQADN
WGHHRHMSYGSPLSPGSDFDYKQTLKNSRSEPDLTGPDVRSTLRRQNQYNQTQNQNHQQQ
RSGRAHSASFYSYHSTQQKKRAPMTPAGTPSSFSTVQHQQQQQQHQQQHCYYTNTQRNDA
NLQNFHFPEQDNYGTINIPSKMDAQDEFDSGVMTLDRAVELLGCLDDKSQTSGANYIQHA
CYQDENCKNLVYQSNGISKLISLLQSPNENVQQAAAGALRNLVFKNAANKLETSQNGGTR
EAVSLLKRTSNPDIQKQLTGLLWNLSSTDQLKDELVKEALPVLNERVVIPYSGWSENSMS
NQNCILDPEVFFNATGCLRNLSSADVGRKAMRNCPGLVESLMCYIQKCLANNCPDDKSVE
NCACILHNLSYHLDSEVPNKYSQLNEQMASHLQNDKSSTGCFSNKSNKLQNNNFELPLPK
EDSNPKGAALLSHSSAIRTYLSLLGQSKKESTLEACAGALQNLTASKGQMSNGMSQIIGL
QNKGLPQIAGLLQSGNADVVKTGCSLISNMSRHPALHKTMATQVFPDVSRLLSQSSGRTM
TSEDILSSACYTMRNLAMAEPQIAKQNISGNLLGNLLNMCKSGVSPKVGEAARVFLTDMW
TQRELQGVLKQQGLDKSIMGSLGSTALRNTISRVF
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgctggcttcaccgtcacccttgaaaacagcacttgcatcagatgtctttctgtggcca
aatgagtcctctctggctgttccttcagacaaatgtctgcgcggtggagtgtctaaggat
cagcgcgttaaggaacaagtcatgatgactgttaaaaggcataagtccaggagttcaacc
tcaaattcaggttacagaggttcaatgtatgatacaatggcagattataacaacatgaat
ctcagcagcaatgctaatcactattccaagtatcagagtgcaaactcaacaggacatcag
tacaatggaacgctgaagaaagaccaacaaagatttagttgttatagtcaagctgacaac
tggggtcatcaccgccatatgtcctatgggtcacctcttagtccaggcagtgattttgac
tacaagcagacccttaaaaatagccgaagtgagccagacctgacaggacctgatgtaaga
tctacactaagacgccagaatcagtataatcaaacgcagaaccaaaaccaccagcaacaa
cgttctggaagagctcacagtgccagcttttacagctaccatagcactcagcagaagaaa
cgagcccccatgacaccagccggaactccatcttcattttcaactgtgcagcatcagcaa
caacagcagcagcatcaacaacaacattgttattacaccaatacacaaaggaatgatgca
aacttacaaaacttccattttccagaacaagacaattatggaaccataaatataccgtcc
aagatggatgcacaagatgaatttgactcaggggttatgaccttggaccgagcagtggaa
ctcttgggatgcctcgatgacaaatcccagacatcgggagccaattacatacagcatgca
tgttatcaggatgagaactgcaagaatttggtttaccagagcaatggaatatctaagcta
atcagccttctccagagccccaatgaaaatgtgcagcaagctgcagcaggagctctaaga
aatttagttttcaaaaatgctgccaataaacttgaaacaagtcagaatgggggcacacga
gaggctgtctcacttttgaaaaggacctctaacccagatatccaaaagcaacttacaggc
ttgctgtggaatttgtcttctacggatcagcttaaagatgaactggttaaagaagctctt
cctgttcttaatgaacgtgtggtgatcccatattctggttggtctgagaattccatgtct
aaccagaactgtattctggatcctgaggtcttttttaatgccactggctgcttaaggaac
ctaagctctgccgatgttggtcgcaaagccatgcgcaactgcccaggtcttgtggagtct
ttgatgtgttacattcaaaaatgtttggctaataattgccctgatgacaagtcagttgag
aactgtgcttgtatcctacataacctgtcttaccacttggactctgaagtaccaaataag
tactcacagctgaatgagcaaatggccagtcacctacaaaatgataagagctctactggc
tgcttcagcaacaaaagcaacaagctgcagaataataactttgagctgcccctaccaaaa
gaagactctaaccctaagggtgctgcacttctgtctcactccagtgctattcgcacatac
ctttctctacttggacagagtaagaaggaatcaacacttgaagcttgtgctggggcactc
caaaaccttacagccagcaaagggcagatgtccaacgggatgagtcaaatcattgggtta
caaaacaaggggcttcctcagattgctggccttttgcaatctggaaatgctgatgttgtg
aagacgggatgctctttaatcagcaacatgtcccgtcatccagctcttcacaaaaccatg
gctacccaggttttccctgatgtttcacgactcctctctcagtcctctggaagaacaatg
acctctgaagatattctgtcctctgcatgttacacaatgagaaaccttgccatggctgaa
ccccagatagccaaacaaaatatttcaggcaatctcctaggaaacttactcaacatgtgt
aaaagtggagtctctcctaaggttggagaagcagctcgtgtcttcctgactgacatgtgg
actcagagggaactgcagggagttcttaaacagcaaggtcttgacaaaagtataatggga
tccctaggaagcacagccctcagaaatactatttctcgagtcttttaa
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