Xenopus laevis (African clawed frog): 108710098
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Entry
108710098 CDS
T01010
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108710098
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108710098
Enzymes [BR:
xla01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
108710098
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108710098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
LDcluster4
Motif
Other DBs
NCBI-GeneID:
108710098
NCBI-ProteinID:
XP_041440625
UniProt:
A0A1L8HBQ4
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All DBs
Position
2S:complement(168691829..168740780)
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AA seq
1500 aa
AA seq
DB search
MGNTKSKSPVPDRIDGVQLHSNVNSPHRPGTADPKKKKKTAPKFIDGEKVDVLNSWVSQN
IRKKECVTFIPQVSETPSDRDKCGCGHTRHTHFEDHISSSVEPGTVWDPHKHVREFPSDA
HGDLTFTGTTRTWAKYVRASNDTPPRLLFNLLTQQWDLSVPNLLISVTGGAKNFNISPRL
KTEFSRGLVTAAQSTGAWIITGGSHAGVMKHVGEAVRDFSGGQHESDIVLIGIATWGIVH
NKEALISEAGGAPAVYHMDEGSQGSLCCLDNNHTHFILVDNGTCGKYGVEIPLRAKLEKY
ISAQTMEKAGTTIKIPIVCVVLEGGPGTLDTIYNSMCNNTPCVIVEGSGRVADIIAQVAH
LRISRITISLVKEKLQNLFQDTYESFTEAQITMWTKKIQDIVRMGSLLTILRDDKTEEQG
MDVAILQALLKASRSTDNSGQENWDHQLKLAVAWNRPDIAESQIFTEDWLWKTSDLYASL
MVSLVDDKPSFLRLFLERGVSLSEFLTWDVLTELYNNTEPSSLIHSKLERQAMLDESTDM
NGPKIQLHHVSRVLQELLGGLTEPLYPDGRSHRTRNLAHINIKISGKVSSMRLASDCTLQ
LEHPVRDLLIWCIVQNRAELAEIIWCQSQDCIVGALACRKILKALSKEEDDTESMENMKK
LADVYEERAAGVFSECYESDESRAEQLLIRVSSIWGKTTCLDLAQESQGQAFMSQGGVQM
FLNKTWCGKLSVDNGLLAILLCMLLFPLIYTGLVMYRKEPLAPRSSRRTDTNGQMKSPVR
SSQTRNCLRTFLHFFTAPIVKFYYNVVSYVGFLWLFAYVLMMNFQTSPSWSEYILYGWVF
AILCEELRQLLYDPDRLGFVVKSVQYISEFWNQIDSLALVLFAVGLICRLASVDTVYLGR
IFLSIDFMIFCVRLLHIFTVSKVLGPKIIMLRRMVMDLFFFFFLLAIWILSFGVAKQAIL
TSNEIRLNWIFRNVVYGPYLTLFGQMPSDIDGLNFDPTKCSQDGTNPLLPKCVYNDGSGN
ALFPEWLTIILMCIYLLMANILLMNLLIAIFSNTFGDVESHTDQIWKFYRFGLIKEYNER
PAAPPPFILLSHFYFLLKYGLSKRSTMSHKAMRCIMDEAGESSLLSWELYMRDNYVHNQQ
LLDAQSQENVVKNTADSVSAVLKLLNMEKGSDGQNMERRLYLLEDQVSRSSQQLQWIVSA
LQEKGFTGTGQMLVHSKSQDLEEKASLGSDSLGDKKSVYHVNSRTLQYPNSNVTRYPVPD
EMVPWEVTFPGYDPPFLIADRDDRGPYDPHSEMSQTNRKYNGVDGALDLRSSCGTYLVQH
GLPLNPMGRTGLRGVGSLRWFGPNHSLHPVITRWNTRPNGSVDRKISRKMLEILVVKQIE
NELWALPGGTLSPGEEIPSKLQSILNEKYVKQFSDLLRGGTEVFRGYLDDPRNTDNSWIE
TRAVNIHLDSEEKLSRFLKNVNESSSGGSLRWQILDHKIPIYADEKEILQRTAELHGTHY
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacacaaagagcaaatctccagttccggatagaattgatggagtccagttacac
agcaatgtgaactcacctcacaggcccggcactgccgatccaaagaagaagaagaaaact
gcacctaaattcattgatggggagaaggtagatgtcctaaactcatgggtgtctcaaaac
atccggaagaaagagtgtgtgaccttcatccctcaagtgtctgagacccccagtgacagg
gataaatgcggctgtggacatacaaggcacacacactttgaagaccatataagttcttca
gtggaacccggtactgtgtgggatccccataaacatgtccgagagtttccttcagacgcc
catggagacctgacattcactggcacaacaaggacttgggcaaagtacgtacgagcctcc
aatgatacccctcctcgcttgctctttaacttattgacccaacagtgggacctcagtgtc
cccaatcttctcatttctgtcactggaggggccaagaacttcaacatcagccccagactc
aagactgaattcagccggggtcttgtgacggcagcgcagagtactggtgcctggatcatc
acaggcgggtcccatgcgggtgtcatgaagcatgttggagaggctgtgcgggatttcagt
ggaggccaacatgagtccgacattgtgctcattggcattgccacctggggcatcgtacac
aacaaggaggccctgatcagtgaggcgggaggagcccccgctgtctatcacatggacgag
ggatcacaggggtcactgtgctgcctggacaataaccacacgcatttcattctggtggat
aatggaacttgtggaaaatatggagttgaaattcccctgagagccaaactggagaaatac
atctcagcacaaaccatggagaaagcaggaacaaccataaagatccctatagtgtgtgtt
gtgctggaaggggggcccgggaccctggataccatctacaattccatgtgcaataacaca
ccctgtgtcatagtggagggctctggccgagtggccgacatcattgcccaggttgcccat
ctgcgtatttccagaattaccatctctttggtcaaggagaagctgcagaacctcttccag
gacacgtatgaaagctttactgaggcccagatcaccatgtggacaaaaaagattcaagac
attgttcgtatggggtcgctcctcactattctgcgagatgataaaactgaagaacagggg
atggacgtggcgattcttcaggctttgctgaaagcttctcggagcactgacaactcaggg
caggagaactgggaccatcagctcaaactggcagttgcctggaaccggcctgatatagcc
gagagccaaatcttcacagaagactggttgtggaagacttcagacctgtatgcttccctg
atggtctcactggttgatgataagccttcctttcttcgtttatttctggaacggggcgtg
agtctgtctgagtttctaacatgggacgtgttaacggaattatataataacactgagcct
tcgagtctgattcacagcaaactggagcgacaggccatgttggacgagtcaacagacatg
aatggaccaaagatccagctccatcatgtgtcccgtgttctgcaggagcttcttggggga
cttactgagccactttatcctgacgggaggtcccatcgcacaagaaatttggcacatatt
aatattaagatatcagggaaagtatcgtctatgaggctagcctcggattgtacgctgcaa
ctggagcaccctgtccgagacctgttgatctggtgtattgtgcagaaccgagcggagctg
gcagagataatatggtgtcagtcccaggactgtattgttggagccctggcctgcaggaag
atcctgaaggctctctctaaagaggaggatgacacagaaagtatggagaacatgaaaaag
ctggctgacgtttatgaggaaagagcagcaggggtcttttctgagtgttatgaaagtgat
gagagtcgggctgaacaacttttaattcgcgtctcttccatatggggaaaaacaacctgc
ttggaccttgctcaggaatctcagggacaagccttcatgtcccagggtggggtacagatg
ttcctcaataagacctggtgtgggaaactctctgtggacaatgggcttctggccattctc
ctgtgtatgttgctcttccctctcatatacactggcctcgttatgtacaggaaggaaccc
ctggccccacggagcagtcgcagaacggacactaacggacagatgaagtcaccagtcaga
agctcacagacacgcaactgtctcaggacgttcttgcatttcttcactgctcccattgtg
aagttctactacaatgttgtgtcctacgttggcttcctttggctttttgcttatgtcctg
atgatgaatttccagacttccccttcatggagtgaatatatactgtatggttgggtcttt
gccatcctttgcgaggagcttcgccagttgctgtacgaccctgacaggctcgggtttgtg
gtgaaatctgttcagtacataagcgagttctggaaccaaattgattcactggctctcgtc
ctgtttgcagttggtctcatttgcagattggcaagtgtggatacagtttacctgggccga
atctttctgtccatagacttcatgatattttgtgttcgtctgctgcacatctttacagtg
agcaaagttcttgggcccaagatcataatgctccggcgcatggtaatggatttatttttc
ttctttttcctcctggctatttggatcttatcatttggagtagcaaagcaggccatactg
accagcaatgaaatcaggttgaattggatcttcaggaacgttgtctatggaccttatctc
actctctttgggcagatgccatctgatatcgacggattgaactttgatccaacaaaatgt
agccaggacggcacaaatcccttactgcccaaatgtgtgtacaatgatggttctggaaac
gctctctttcctgaatggctgacaatcattttaatgtgtatttacctgctgatggcaaat
atccttctgatgaaccttctcatcgctatattcagtaacacattcggagatgtagagagt
cacacagatcagatctggaagttctaccgctttggcctaataaaggaatataacgagcgc
ccagcggcaccgccaccgttcattctactgagtcacttctactttctcctgaagtatgga
ctgagcaagcgttccaccatgagccacaaagccatgagatgcataatggatgaagctgga
gaatcatctcttctctcctgggaattgtacatgagagacaattatgtgcataaccagcag
ctgttggacgcacagagtcaggagaacgttgtgaagaacacagccgatagtgtctctgct
gtgctaaaactgctcaatatggagaaaggcagtgacgggcagaacatggagaggaggttg
tatttactggaagaccaggtatccagatcttcacagcaacttcaatggatcgtatcggcc
ctccaggagaaaggttttactggcacgggccagatgcttgttcacagcaagtctcaggat
ttggaggagaaggcctctcttggctcagattctttaggggacaaaaagtctgtttatcat
gtaaatagcagaaccctgcagtaccccaattctaacgtgacacgttacccagtcccagat
gagatggtgccgtgggaggtgacattcccaggctacgaccctcctttcctcattgccgac
agggatgatcgggggccctatgatccccattcagagatgtcacagaccaataggaaatac
aatggagtggatggagcgttggatttgcggagctcatgtggaacatacctagtgcaacat
gggttaccactgaacccaatgggtcgaacaggtttgagaggagttggaagtcttcgttgg
tttgggccaaatcattctctgcacccagtaataacccgttggaatacgcggcccaatggc
tctgtggacagaaagatttctcggaagatgttggagattttggttgttaaacaaatagag
aatgaactgtgggcactgccagggggcactctgagcccaggagaagagattccttccaag
cttcaatccattctcaatgagaaatatgtaaagcagttctcagatctcctcagaggtggg
acagaggtgtttcgggggtatctagatgaccccaggaacacggacaactcctggattgaa
acccgggctgtgaatattcatctggactccgaggagaaactgagtagattcctaaagaat
gtgaatgaatccagctctgggggttctcttcgctggcaaatcctggaccacaagatccca
atctatgccgatgagaaggaaattctacagagaacagcagagttacacggcacacattac
taa
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