Xenopus laevis (African clawed frog): 108712501
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Entry
108712501 CDS
T01010
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-C5
KO
K16497
protocadherin gamma subfamily C
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
108712501
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Protocadherins
108712501
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
108712501
NCBI-ProteinID:
XP_018110188
UniProt:
A0A8J0UU38
A0A974D9E3
LinkDB
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Position
3S:119131873..119134774
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AA seq
778 aa
AA seq
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MDLQSPGKDWKWQVVYFFFLYSWGWASGQLRYSIAEESEPGTLAGNVAQDLELNLADIEK
RKLSLRSGDNDRYFIVDQKTGAFAVRNRIDRESLCGSSLTCLLPLELGIEKPFELFSVEI
EILDINDNAPTFSSADQIIKIIEMFANPGVRFPLDTAEDSDVGINGISQYKISPNPFFSL
SLKNRKDGSLIAELVLEKKLDREEKGQHDLLLTAFDGGEQPRSGSTQITIIVLDVNDNAP
VFDQPNYKITLVENLPIRTVVVKLNATDPDEGDNAEIGYFFDHHTLPAAKEIFDLNSNTG
EICLKGLVDFEESHFYELFVKAIDKGTPQQEGRCLVQIEVEDINDNSPEIIFTSNTNEVP
EDAPIGTVVGFITVRDKDSGKNGEVQLDVSSNLPFKIQPFKNRYSLVTSEYLDREKTAQY
TIQVTASDLGSPALSNQTVIVLNISDFNDNPPIFSQAVYTAHIKENKEPGALLCTVSATD
PDEGSNSDLTYSIFESQIDGSSVSSFVYINPKIGDIYAQGSFDYEHFQVLTVTVRVGDSG
SPKLFSNVSVYIFILDTNDNAPTVLYPGDSKGFIAQEKIPQSASAGYLVSKISAMDLDSG
HNAWLSYRIIEPVTQTLFEISQYTGEIRIIRSFLEMDNTEQHLVISISDHGEPTLSSTVT
MIINAVDTIAQDLPQSQDLIPNSQTSPNLTLYLIISLVAISLVSLITFLIFLVKCLKKDS
YGSSSGFCFSRKYQAKHYTDQYKPTLYLNTWDFEIHGSEDGFSRITGAMLSSLFPYCF
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggacctccaaagcccaggaaaggattggaaatggcaagtagtatatttctttttcctg
tatagctggggctgggcctctgggcagcttcgatattctattgcagaggagtcagagcca
ggaacattggcagggaatgtggctcaggatttggagttaaacctggcagatattgaaaaa
cggaaactgagtttaagatctggtgataatgacagatattttattgttgaccagaaaact
ggagcttttgctgttagaaataggattgatagagaaagcctttgtggttccagtttaaca
tgtttattgcctttggagcttggcattgaaaagccttttgaactgttcagtgtagaaata
gaaatattggatattaatgataatgctcccactttctcatcagctgatcaaataataaaa
attattgagatgtttgcaaatccaggtgttcgatttcctctagatactgctgaggattct
gatgtaggaatcaatggtattagccagtacaagatcagcccaaacccattcttttcattg
tctttaaagaatcggaaggatggctcactcattgcagaattagtgcttgaaaaaaagtta
gatagagaggaaaaagggcaacatgatttattgctgactgcatttgatggaggagaacaa
ccaagatctggttccacccagataaccatcatagtcctagatgttaatgacaatgcccca
gtgtttgaccagccaaattataaaatcactttagtagaaaatctcccaataaggacagtg
gttgtgaagcttaacgccacagatccagatgaaggagataatgctgaaataggttacttt
tttgatcatcacacgttacctgcagcaaaagaaatatttgatttaaattcaaacacaggt
gaaatatgtctcaaaggattagtggattttgaagagtcacatttttatgagttatttgtc
aaagcaatagataaaggcacaccacaacaagagggacgctgcctcgtccagattgaagtg
gaggatataaacgataatagcccagaaattattttcacctcaaatactaatgaagtgcct
gaagatgctcccataggaactgtggttggatttatcactgtgagagataaagactcagga
aaaaatggagaagtacagttggacgtatcatcaaatttgccttttaaaattcaacccttc
aaaaacagatattcattggtgactagtgaatatttggacagagagaagactgcacaatat
actattcaagttacagcttctgatttaggttctcctgcattaagcaatcagactgtgata
gttcttaatatttcagatttcaatgataatcctcccattttttctcaggctgtttacact
gcccatataaaagaaaacaaagaacccggtgctttattatgtactgtttctgccactgat
cccgatgaaggatcaaattctgatctgacttattcaatatttgaaagtcaaattgatggc
tcttctgtatcttcatttgtgtacatcaatccaaaaattggtgacatttatgcccagggt
tcctttgactatgaacattttcaagttcttactgtcactgtaagagtgggagattctgga
tctccaaaattattttcaaatgtgtcagtctacatatttattttggatacaaatgataat
gctcccactgtgctgtatccaggggattcaaagggatttatagcccaagagaagattccc
cagtctgcatctgctggttatttggttagcaaaatatctgcaatggatttggactctgga
cacaatgcttggcttagctacaggattattgagcctgtaactcaaactttatttgagatc
tctcaatatacaggagaaataaggataattcgaagtttccttgaaatggataatactgag
caacatcttgtcatttcaatcagtgaccatggggaaccaacattatcatcgactgttaca
atgattataaatgctgttgacaccattgcacaagacttaccacaatctcaggacttgatc
ccaaattctcaaacatccccaaatttgaccctatatttaataatttcactggtggccata
agtttagtttctcttattactttcctcatttttcttgtgaaatgcttaaaaaaggatagt
tatggaagtagcagtggattttgcttttcacgcaaataccaggccaagcattacacagac
caatataaaccaacactttacctgaacacatgggactttgaaatacatggaagtgaggat
ggtttctcccgaatcacaggggcaatgttatcaagcttgtttccctactgcttctga
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