Xenopus laevis (African clawed frog): 108713026
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Entry
108713026 CDS
T01010
Symbol
irf5.S
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108713026 (irf5.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108713026 (irf5.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
108713026 (irf5.S)
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
108713026
NCBI-ProteinID:
XP_018111170
Xenbase:
XB-GENE-17331285
UniProt:
A0A1L8GTJ1
A0A974D7R1
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Position
3S:complement(64450344..64467769)
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AA seq
518 aa
AA seq
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MNSHHRRVRLKPWLVAQVDSGQYPGLHWVDQDRKVFRIPWRHATRHIPIQDDENTVFKAW
AKETGKYQEGVDEPDPAKWKANLRCALNKSREFNLRYDGTKETPVQPFKLYQLCDSPGQN
EEPIVDDNDGDDDEEQIGARFPMLHISDSLCPPVPDTLHPFIWPKAEPDFHSSCTNHNFP
GPQDIIQHNLTAQSTAATPVPAGAYSEVDMSPQSLVSQNAALPLPELVQGSVLKPSSDVE
LSVQGGIPPSIDQGIPDVLISPQMLPLTDLEIKFLYRGKQAGSMTVSNPHGCRLFYSNLE
PTPEQVELFGPTTLEQVRFPGTEGVNNEKQKFYTNHLLDVMDRGLILFLQGQDIYAIRLC
QCKVFWSGPCASNTDRPNSIEREKRIKIFSLETFLNELIACQKGLTTSLPSYEIFFCFGE
EWPDRKPKEKKLITVQVIPVAARLLSEIFTGESSWSADSIRLQISHPDLKDKLVEQFKEL
HQLWQSQQASAVPQVEAIPNPECDVGTGPWPMHTGNME
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaactctcatcatcgacgtgtacgactaaagccatggctggtagcacaggtggacagc
ggtcagtatccaggactgcactgggtggatcaagatcgcaaggtatttcgtattccgtgg
cgccatgcaacccggcacatacctattcaagatgatgaaaatactgtatttaaggcctgg
gcgaaggagacagggaagtaccaggaaggagtggatgaacctgacccagctaaatggaag
gcaaatcttcggtgtgccctaaacaagagcagagaattcaatcttcggtatgatggcacc
aaggagacccctgtgcagccatttaagctctatcagttatgtgattcgccaggacagaat
gaagagcccattgttgatgacaatgatggtgatgatgatgaggagcagattggtgctaga
tttccaatgctccatatcagtgattccttgtgccctccagttccggacactttacatcca
ttcatttggcctaaagctgaacctgactttcacagctcatgtacaaaccacaactttcct
ggacctcaggacatcattcagcataacctgacggctcaatccactgctgcaacccctgtt
cccgctggagcatactctgaagttgatatgtcaccccagagtttggtatcacaaaatgca
gcccttcctctcccagagttggtccaaggaagtgtcttgaaaccatcatcagatgtggaa
ctatccgtccaaggagggattccaccatctattgatcagggaatcccagacgtcctcatc
agtcctcaaatgttacccttgactgatctagaaatcaagtttttatacagaggaaaacag
gctggatcaatgactgttagtaatccccatggttgccgcctcttctacagtaatttggaa
cccacccctgaacaagtggagttatttgggcccaccacactagagcaagttcgcttccct
ggaacagaaggggtcaataacgagaaacaaaaattctacactaaccatctactggatgtg
atggaccggggacttatcctgttccttcaaggtcaagatatctatgccatccgtctctgc
cagtgcaaggtcttttggtctggaccctgtgctagtaacactgatagacccaattccatt
gagagagaaaagaggattaagatcttcagtctggagaccttcctgaatgagctcattgct
tgtcagaagggactaacaacctcactgccctcgtatgagatctttttctgttttggggaa
gaatggccagaccggaaacccaaggagaagaagctaattactgtgcaggtcattccagta
gcggcccgtttactctctgagatcttcacaggggaatcttcatggtcagctgacagtatt
cgacttcagatttcccatccagaccttaaagacaagttggtggagcagtttaaggagcta
catcaactgtggcagagtcagcaagcctcagctgttccacaagtagaagcaataccgaac
cctgagtgtgatgttggcactggcccttggccaatgcatactggaaacatggagtag
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integrated database retrieval system
