Xenopus laevis (African clawed frog): 108714646
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Entry
108714646 CDS
T01010
Symbol
plxnd1.L
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108714646 (plxnd1.L)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
PSI_PlexinA-B
TIG_2
Insulin_TMD
CoV_RPol_N
ECSCR
Motif
Other DBs
NCBI-GeneID:
108714646
NCBI-ProteinID:
XP_018114545
Xenbase:
XB-GENE-17342385
UniProt:
A0A1L8GPJ1
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All DBs
Position
4L:complement(131420433..131509711)
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AA seq
1875 aa
AA seq
DB search
MDPTLLLLLLVPLGSGLELVSKFHSPHVTNNFALSGGEGLLYLAAVNRLYQLDWDLRPEL
EDVTGPVLDSPLCHAPQLRETTCDFPRSPSPNYNKILIPDQEQGLLLTCGSVYQGLCELR
ALRNITLRAVPFPVDNAVPSMLNVAANHPNASTVGLLIRGPGGDTKLLVGATYTGYSSQF
FPWNQSIADHRFENSPEISIRALNLTSSEKLFTFDISPSDDNIFKVKQSFKAKHRLGFVK
AFQQGPFAYLAMNVEPAPAGKESRPSSVLARICLKSEPRAEPRKLTESYIQLGLRCEGPG
GALFGRLLSVFAESERIFGVFEGKKEAALCTFPLRAVAQEIRGARRGCFESQDTGDVTVL
DSVVQGTGPSCERKNYRVKLQEEQLDCGAAHLQHPLSITRPLSATPLFQGLGLTSVAVAN
VSGYTVAFLGTSSGHLIKITLNADMAIISKQSIMIARGQPVHHVMEFDPMDPTYLFVMTS
HQMTRVKVAECDKYQSCTECLAAADAYCGWCTLEGRCSLQKECQGSEDSAFWMSPNVGQV
HMCPAMSSIPNKTDVSSNTQSIILQITGNLPMLQQINVSCDYGNNIITPAVILFVNGQQW
GHCPFLPRDTFPPFPPSQDYVMVGMSLSVGGNSIIQHKFIIYDCNRTQKMHPKNACTSCV
KSRWPCRWCVSQHKCVSNASECDTIAQNSTESCPRITATSLTPTPTGVTKDFTLTLVNTN
IIESPKLECDFGTEQTFPAKWLNSSTVACSNVLLHTSERSQSFPINLQLSDHNGLYLDNP
SMLSVEVYNCASQTTDCSSCLGRADRGHHCYWSESSLSCRLNSDIQSIPYPYTCPAPDIK
KIDPVSGPLLGGTLLTIQGRNLGSRFSDINGKVKIGETECTPIQEKYIVSEEIVCMTGES
PELLTDWVSVDVNGGGRSKEKYSFQLPEVEYLSPDFGPRSGGTRVTISGTKLNIGRDVRV
LFNKTQECRDLVRTPSTIQCTVPATEILPDIKVNICVQFERKSCVKEELFFKYQENPMIK
SMDPRSSPISGGRIITVTGERFDMVQSMMIEIQNEKGRRTNCTVLNPTIITCPSPTAPNS
TMENKNVTLNFYINGVQVALGEDFSDEEDLHSFNHFSLEYQPDPMFYTAKKEKLIKHHVG
EPLTLVIHKEPDNLGLRVDEYQVKVGQIPCESIFIFNDKVIHCSINESLSSTQRYLPVTI
QVGKFNQTITTLHLAGIDTSIIISIVICSILLLLSVVALFVFCTKSRRAERYWQKTLVQM
EEMESQIREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYRHFVTRTFFPKCSSLYEERY
ILPTQNFNTQLGFQVPETHPLLCGEWKVPENCRTNMEEGITLLSTLLSNRHFLITFIHAV
EFQKDFAIRDRCNLASLLTIALHGKLEYYTSIMKDLLVDLIDSSASKNPKLMLRRTESVV
EKMLTNWMSICMYSCLRETVGEPFFLLLCAIKQQINKGSIDAITGKARYTLNEEWLLREN
IEAKAMNLNVSFQGCGMDSLSVRVLDTDSVSQCKEKILEAFCKNLPFSQWPRVEDVDLEW
FACSSKSYILKDLDDSSLMEDGKKKLNTLAHYKVYDAASLAMSLKDKRDDTLGRVKDLDT
DKYFHLVLPTDDLAEMKRSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFRAILSIHE
DRPPLAIKYFFDFLEEQAEKRGISDPDTLHIWKTNSLPLRFWVNILKNPEFVFDMEKSDH
MDACLSVIAQAFIDACSISDMQLGKDSPTNKLLYAKEIPEYRKIVQRYYQKLKEMSPLSE
QEMNAHLAEESRKYRNKFNTNVAMAEIYKYAKKYRTQIVAALEANPITKRGQLQHKFDQV
IVLMEDDIYTCISEA
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atggatccgactctcctgcttctgttgctggtgccactggggtcggggctggagttggtg
agcaagtttcactctcctcatgtcaccaataactttgcgctgagcggcggggaggggctg
ttgtacctggcggcggtgaatcgcctctatcagctcgactgggacctgcggccggagctg
gaggatgtgaccggtccggtattggactccccgctgtgtcacgctcctcaactgagagaa
accacctgtgacttcccccggagcccgagccctaactacaataaaatcctaatacccgac
caggagcaggggctgttactcacctgcggatctgtctatcagggtctgtgcgagctgcgc
gccctgcggaacatcacgctccgcgcagtgccattccctgtagataacgcggtgcccagt
atgctcaatgtcgctgctaatcacccgaacgcttctaccgtaggactgctgatccggggc
cccggcggggacaccaaattactggtgggggccacatacactggatactcgagccagttc
tttccctggaaccaaagcatcgcggaccatcgattcgaaaacagcccggagatttccatc
agggcccttaatctcacctcctccgagaagcttttcacttttgacatcagtccgtccgat
gacaacatattcaaggtaaagcagagctttaaggccaagcaccgcctgggatttgtcaaa
gcatttcagcagggaccattcgcttacctggccatgaacgtggaacccgcccctgcgggg
aaggagagccgccccagtagtgtgttagcgcggatctgtctgaagtcggagcctcgagcg
gagccgcgcaaactcaccgagtcctacatccaactaggactgcgctgcgaaggtccagga
ggggccctgtttggccgcctgttgtcagtgttcgcggagtccgagaggatatttggggta
ttcgaggggaagaaggaggcggcgctctgtacgttcccgctgcgcgctgtggctcaggag
atccgcggggcgcggaggggctgctttgagagccaggacaccggggacgtgactgtactg
gacagtgtggtgcaggggactggccccagctgcgaacgcaagaactacagggtcaagctg
caggaggagcagttggactgtggggcggctcatctccaacacccactgtccatcactcgc
cctctatccgccacacctctcttccaaggcctgggattgacttctgtggctgtggccaat
gtcagcggttacacagtagcattcctggggacttcgagcggccatctcataaagattacc
ctaaatgcagatatggcaattatcagcaaacaatccattatgattgctaggggacagccg
gtccaccatgttatggagtttgatcccatggaccccacgtacctcttcgtgatgacatca
catcagatgacgcgagtaaaagtggcagaatgtgacaagtatcagagttgtacggagtgc
cttgctgcagcggatgcttactgtggttggtgcaccctggaaggaaggtgttctctccag
aaagagtgtcaaggttctgaggattcggcattctggatgagtcccaacgtgggtcaagtg
cacatgtgccccgcaatgagcagcattcccaataaaacagatgtttcctccaacacccag
agcatcatactccagatcactggaaatctcccaatgcttcagcagattaatgtgtcgtgt
gactacgggaataatataatcacgcctgctgttatcttatttgttaatggccagcaatgg
ggtcactgccccttccttcccagggacacgttcccaccattcccaccaagccaagattat
gtgatggtcggtatgtcgctgtcagtgggagggaacagcatcattcagcacaagttcatc
atctatgactgcaacaggacgcaaaaaatgcatcctaagaatgcgtgcaccagctgtgtg
aagtctcgttggccttgcaggtggtgtgtgagccaacacaagtgtgtttccaacgcatca
gaatgtgacaccattgcacagaacagcacagagagctgtcccaggataacagccacaagt
ctgactcccacgcccaccggagtcaccaaggattttacgctaacactggtcaacacaaat
attatagagagcccaaaactggaatgtgactttggaacagaacaaacttttccagccaaa
tggttgaactcctccacggtcgcgtgcagcaatgtactgttgcacacatctgaaagaagc
cagagcttcccaatcaacctgcagcttagtgaccataacggactgtatcttgacaatcca
tccatgctgtctgttgaagtatacaactgcgcttcccagaccacagattgctccagttgc
ttaggtcgtgcagaccgtggccaccactgctactggagtgaaagcagcttgtcatgtcgg
ctgaacagtgatatacaatccattccgtatccatacacctgtcctgctcctgatataaag
aagatcgatccagtcagcggacccctgctgggtggtactcttcttactatccaaggacgc
aacctcggaagccgattcagcgatatcaatggaaaagtcaagattggagaaacagagtgc
acccccatacaagagaaatacattgtgtctgaggagattgtgtgtatgactggagagtct
cccgagctgctcactgactgggtctctgtagatgtaaatggaggtggaaggtccaaggag
aaatattcgttccagttgccagaagtggaatatttatctccagattttggccctaggtca
ggtggaaccagagtaaccatatctgggaccaagctcaatattggtagagatgtccgagtc
cttttcaataagacacaagaatgcagagaccttgtacgcacaccgagcacaatccaatgt
acagttccagctacggaaattctccctgatatcaaagtcaacatctgtgtccagtttgag
agaaaatcttgtgtaaaggaagaactctttttcaagtatcaagagaacccgatgatcaag
agcatggatccaaggagcagcccaatcagtggtggccggatcatcactgtgactggtgaa
agatttgatatggtgcagtctatgatgatagaaattcagaacgaaaaaggaaggcgaacg
aactgcacagtcttaaacccaactataatcacttgcccctctcctacagcccccaacagc
accatggagaacaagaatgtcaccctgaacttttacattaatggggtgcaagtggctctt
ggggaggatttttctgatgaggaagacctgcacagctttaaccatttcagcctggagtat
cagccggacccaatgttctacacagccaagaaggaaaagctgatcaagcatcatgtgggg
gaaccactgactctggttatacataaagagccagacaaccttggactgagagtagatgaa
tatcaggtgaaggtcggacagattccgtgcgagtcgatctttatctttaatgacaaggtc
atacactgcagcatcaatgagtctttgagctccactcagcgctatctacctgtgacgata
caagttggtaaattcaatcagactatcaccactctgcacctggccgggatagacacgtca
atcatcatctccatagtcatctgcagtatattgttactcctgtccgtggtcgctctgttt
gttttctgcaccaagagtcgtagagctgagcgatattggcagaaaaccctagttcagatg
gaggagatggaatctcagatccgagaggaaatccgtaaaggatttgctgagctacagaca
gacatgacagacctaaccaaggaattaaatcgcagccaaggaatccccttcctagaatac
aggcattttgtcacacgcactttcttcccaaagtgttcatctctgtatgaagagcgctac
atcctacccacacagaactttaacacccagctcggcttccaggtgccagagacacaccca
ctgctatgtggagagtggaaggttccagagaactgccggacaaacatggaggaaggaatt
accctactgtctaccctgcttagcaacaggcacttcctgatcaccttcatccatgctgta
gagtttcagaaggactttgctatccgagacagatgcaacttggcttctctgctcaccatt
gctcttcatgggaagctggagtattatacaagtattatgaaggatcttctagtggatctc
attgactcttcagcctccaaaaaccccaaactcatgttgcgtagaacggagtctgtagtc
gagaagatgctcaccaactggatgtccatctgcatgtacagctgtctcagggaaacggtg
ggagagccatttttcttactgctctgtgccataaagcagcaaatcaataagggatccatt
gacgccatcactgggaaggccagatacacactgaacgaggagtggctgctcagagagaac
attgaggccaaggctatgaacctcaatgtgtctttccaaggctgtggcatggactccctg
agcgtgcgtgtgttggacacagactccgtaagccagtgcaaggagaagatcctggaggct
ttctgcaagaatctgcccttctcacagtggcctagagttgaggatgtggatttggaatgg
tttgcctgcagctcaaagagttacatcctgaaagaccttgatgactcatcactcatggaa
gatgggaagaagaagctgaatacattagcacactacaaggtctacgatgcagcctccctg
gcaatgagcctgaaggacaaacgagatgacaccttaggcagagtgaaggatttggacacc
gacaagtattttcatttagttctccctactgatgacttagcagaaatgaaaaggtctcac
agacaaagccacaggaagaaggttctgcctgagatctacttgacccggctcctgtctaca
aagggcacgctgcagaaattcctagatgacctgttcagagccatcctgagcatccatgag
gatcgacccccactagctatcaagtacttctttgatttcctggaggagcaggctgaaaag
cgaggcatatctgacccggacacgctacacatctggaaaactaacagccttcctctgcga
ttctgggtgaacattctgaagaacccggagtttgtgttcgacatggagaaatctgatcat
atggatgcctgcctgtcagtcattgctcaagcgttcattgatgcctgctccatctctgat
atgcagctgggcaaggattctcctaccaacaagctgctgtatgcaaaggagatcccagaa
taccggaaaattgtgcagcgatattaccagaagcttaaggagatgagtccactgagcgag
caagaaatgaatgcgcatcttgccgaggagtcacggaaatatcggaataaatttaacacc
aacgttgcaatggctgaaatctataaatatgccaagaaatacagaacacagattgtcgca
gccttggaagcaaatcccatcacaaaaagagggcaactgcaacataaatttgatcaggtg
attgtgctgatggaggatgatatttacacatgtatcagtgaggcataa
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integrated database retrieval system