Xenopus laevis (African clawed frog): 108715060
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Entry
108715060 CDS
T01010
Name
(RefSeq) brain-derived neurotrophic factor isoform X2
KO
K04355
brain-derived neurotrophic factor
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108715060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xla04052
]
108715060
Cytokines and neuropeptides [BR:
xla04052
]
Cytokines
Growth factors (RTK binding)
108715060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
NTF3_N
Spaetzle
Motif
Other DBs
NCBI-GeneID:
108715060
NCBI-ProteinID:
XP_018115398
UniProt:
A0A974CZZ3
A0A1L8GDT3
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All DBs
Position
4S:complement(8494380..8558438)
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AA seq
247 aa
AA seq
DB search
MTILFLTMVISYFSCMKAAPMKEASVRGQSGLAYPGLRTHGTLESIGGPSGSRGGGLPSL
TDTFELVIEELLEEEQSIRQSEESKDSDLYSSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
NMSMRVRRHSDPARRGELSVCDSISEWVTAANKKTAVDMSGQTVTVLEKVPVSKGQLKQY
FYETKCNPMGYMKEGCRGIDKRYWNSQCRTTQSYVRAFTMDSKKKVGWRFIRIDTSCVCT
LTIKRGR
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccttttccttactatggttatttcatacttcagttgcatgaaagctgccccc
atgaaagaagccagtgtcagaggacaaagtggcctggcctatccgggtcttcggacccat
ggtactcttgagagcataggtggtcccagtggctcaagaggaggtggacttccttcactg
acagatacttttgagcttgtcatagaagaactcctggaagaggaacaaagtataaggcaa
agcgaggaaagcaaagactctgacttgtattcatctagagtaatgctaagcagtcaagta
cctttggaaccaccattgcttttcctacttgaggagtacaaaaactacttggatgctgca
aacatgtccatgagggtccggcgccactctgacccagccagacgtggagagctgagcgtg
tgtgacagtattagcgaatgggttacagcagcaaacaagaaaactgcagtggacatgtcg
gggcagacggttactgtcctagaaaaagtcccagtatctaaaggccaactgaagcaatat
ttctacgagaccaaatgcaaccctatgggttacatgaaagaaggctgcagaggcatagac
aaaaggtactggaactctcagtgccgaactactcagtcttacgtgcgggctttcaccatg
gatagcaaaaaaaaagttggttggcgctttataagaatagacacttcttgtgtatgtaca
ctgaccattaaaaggggaagatag
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