Xenopus laevis (African clawed frog): 108719872
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Entry
108719872 CDS
T01010
Symbol
hacd1.S
Name
(RefSeq) very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1
KO
K10703
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:
4.2.1.134
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00062
Fatty acid elongation
xla01040
Biosynthesis of unsaturated fatty acids
xla01100
Metabolic pathways
xla01212
Fatty acid metabolism
Module
xla_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
108719872 (hacd1.S)
01040 Biosynthesis of unsaturated fatty acids
108719872 (hacd1.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xla01004
]
108719872 (hacd1.S)
Enzymes [BR:
xla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.134 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
108719872 (hacd1.S)
Lipid biosynthesis proteins [BR:
xla01004
]
Fatty acid synthase
Component type
108719872 (hacd1.S)
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Gene cluster
GFIT
Motif
Pfam:
PTPLA
DUF4383
Motif
Other DBs
NCBI-GeneID:
108719872
NCBI-ProteinID:
XP_018124619
Xenbase:
XB-GENE-17339435
UniProt:
A0A8J0VJH1
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Position
6S:21397851..21435153
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AA seq
240 aa
AA seq
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MALSDDEGSVEEKEPPKKKIGPVATAWLTFYNIAMTAGWLVLAIAIIRFYAEKGTHKGLY
RNIQKTLKCFQTFALLELVHCALGIVHTSVLVTGVQVSSRVFMVWFITSSIKQVQSEDSV
LIFLVVWTVTEITRYSYYTFKLLNHLPYFIKWARYNLFIVLYPVGVVGELLTIYAALPHV
RKSAMYSLRLPNKYNVSFDYYYFLIIAMCSYIPLFPQLYFHMLRQRRRVLHGEVIMEKDD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcattaagcgatgatgaagggtctgtggaagagaaggaaccccccaagaaaaagatc
ggtcctgtggctacggcatggctcaccttttacaacattgccatgacagctgggtggctc
gttcttgccatagccataatccgattttatgcggaaaaaggaacacacaagggtttgtac
agaaatatacagaagacgcttaaatgtttccagacatttgctttacttgagctggtccac
tgcgcactgggaatagtgcacacatcggtgctagtaacaggggtccaagtcagttcaagg
gtcttcatggtctggtttattacaagcagtataaagcaggtccagagtgaagatagcgtt
cttatttttcttgtcgtatggactgtgacagagatcacacgatattcctactacacattc
aaacttctcaaccacttgccatacttcattaaatgggccaggtataatttatttattgta
ttgtatcctgttggtgttgttggggaactcctgactatttatgctgctttgccccacgtt
cggaagagtgcaatgtattctctgagacttcccaacaagtacaacgtttcttttgactac
tactacttcctgatcatcgcaatgtgttcttatataccattattcccccaactgtacttc
cacatgctgcgccagagaaggagagttctacacggagaagtgatcatggagaaggacgat
taa
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