Xenopus laevis (African clawed frog): 373644
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Entry
373644 CDS
T01010
Symbol
ldlr.S, fhc, LDL_receptor-2, ldlcq2, ldlr, ldlr-a, ldlr-b, ldlr2-a
Name
(RefSeq) low-density lipoprotein receptor 2 precursor
KO
K12473
low-density lipoprotein receptor
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03272
Virion - Hepatitis viruses
xla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
373644 (ldlr.S)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
373644 (ldlr.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
373644 (ldlr.S)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
373644 (ldlr.S)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
SGL
EGF_CA
hEGF
Vgb_lyase
EGF
Motif
Other DBs
NCBI-GeneID:
373644
NCBI-ProteinID:
NP_001079111
Xenbase:
XB-GENE-962375
UniProt:
Q99088
LinkDB
All DBs
Position
3S:124097799..124111854
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AA seq
892 aa
AA seq
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MMKPAVSFPLLLLGLCHVSAFSGIGKCDRNEFQCGDGKCIPYKWICDGSAECKDGSDESS
ETCRALTCGADQFSCGGRLNRCIPMSWKCDGQTDCENGSDENDCTRKVCADDQFTCRSGK
CISLDFVCDQDQDCDDGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDRDCEDGSDE
DHCEGREPIKTDKPCAPLEFHCGSGECIHMSWKCDAGYDCKHKSDDKDCVKPTCRPDQFQ
CNDGTCIHGSRQCDREYDCKDLSDEEGCVNVTKCQGPDVFKCRSGECITMDKVCHKKRDC
RDWTDEPIKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLVDQKRCEDINECENPN
TCTQICINLHGGYKCECREGYQMDPVTASCKSIGTVAYLFFTNRHEVRKMTLDRSEYTSF
IPRLKNVVALDMEIASNKIYWSDLTQRKIYSASMDKADNTSHHETVISNQIQAPDGIAVD
WIHGNIYWTDSKFSTISVANTEGSKRKTLFTDDLAKPRDIVVDPSQGFMYWTDWGLPAKI
EKGGLNGVDRYPLVTDNIEWPNGITLDLISQRLYWVDSKLHSLSCIDITGENRRTVLSDE
THLAHPFGLTIFEDLVFWTDIENEAIFSAKRLTGENIMKVAEHLLSPEDIVLYHNLRQPK
AENWCESHHLGNGGCGYLCLPAPHVNARSPKFTCACPDGMHLGTDMRNCMKEPVTQEATT
STTTSAPVTTTSTARPSSRITTLAKIASTTSTLAPQRPKMVSTTVPPRRPTTNSPKTTLR
MNTEKVPAHTTQEPMTHSQLARNKFAEAGVVESARSHPTALYIVLPILILCLVSFGGFLL
WKNWRLKNTNSINFDNPVYQKTTEEDQVHICRSQDGYTYPSRQMVSLEDHIA
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacctgcagtatccttccccctcctgctgcttgggctctgccatgtgtctgcc
ttctcagggattgggaagtgtgataggaatgaattccagtgcggggatgggaagtgcatc
ccgtacaagtggatttgtgacggcagtgctgagtgcaaagacggatcagatgaatcctca
gaaacttgccgggcgctaacatgtggcgctgaccaatttagctgtggtggaaggcttaac
cgctgtattcccatgtcctggaaatgtgacggccagacagactgtgaaaatggttcagat
gagaacgactgtacccgcaaagtatgtgccgacgaccagtttacatgcagaagtggaaaa
tgcatctcccttgactttgtttgtgatcaagaccaggactgtgatgatggcagtgatgag
agttactgccctgcccccacctgcaacccagccatgtttcagtgtaaagacaaaggcatc
tgtatccccaaattgtgggcctgtgatggagatcgtgactgtgaagatggttcagatgag
gaccattgtgaggggcgtgaacctatcaagactgacaagccctgcgctccacttgagttc
cactgtgggagtggggaatgcatacacatgtcctggaaatgtgatgcgggatatgactgc
aagcacaaatcagatgacaaagactgtgtaaaacccacctgccgtccagatcagttccag
tgtaacgatggcacatgtattcatggcagccgccaatgtgaccgagaatatgactgcaaa
gatcttagcgacgaggaggggtgtgttaatgtgacaaaatgccaaggccctgacgtattc
aaatgccgctctggcgagtgcatcacaatggataaagtctgtcacaagaaaagagattgc
agggactggacagatgaacccattaaagagtgtggtgaaaacgagtgtctgagaaacaat
ggcggctgctcccacatctgcaatgaccttaaaataggatatgagtgtttgtgtaacgaa
ggatacagactcgtagaccagaaacgctgtgaagacataaatgaatgtgagaatcctaat
acctgcactcagatttgcatcaatcttcatggaggctacaagtgtgaatgccgagaaggt
tatcagatggatccagtgactgcatcctgcaaatccattggaactgtggcttacctgttc
ttcaccaaccgccatgaggtgaggaagatgacactggatcggagtgaatacacaagcttt
atccctcgtcttaagaatgtggtggctttggatatggaaatagccagcaacaaaatctac
tggtctgacctgactcagaggaaaatatacagtgcatcaatggataaggcagacaacaca
tcccaccatgaaactgtgatcagcaaccaaatccaagctcccgatggaattgcagtggat
tggatccatgggaacatctattggacagactctaagttcagcaccatttctgtggccaac
acagagggatcgaagaggaaaacgcttttcactgatgatctggcaaagcccagggacatt
gtggtggatccatctcaagggtttatgtattggactgactggggcctcccagccaagatt
gagaaaggaggcttaaatggagttgatagatacccattggttacagacaacattgaatgg
cccaatggcatcacattagacttgatcagtcagcggctatactgggtggactctaaactt
cactctctgtcctgcattgatattactggagagaacagaagaaccgtcctctctgacgag
acccacctagctcatccgtttgggctcaccatctttgaggatcttgtattctggacagac
attgaaaatgaggctatattcagtgcaaaacgactgactggtgaaaatattatgaaagtg
gcagaacatcttttgtctccagaggacattgtcttgtaccacaacctgaggcagccaaaa
gctgaaaattggtgtgaatcccatcatcttggtaatgggggctgcgggtacctgtgtctt
ccagcacctcacgtcaatgcacgttctcccaaattcacctgcgcttgtccagatgggatg
cacctggggacagacatgaggaactgcatgaaagaacctgtgacacaagaagccactacc
tcaaccaccacatcagcaccagtcacaaccacttcaacagcccgcccctcttctagaatt
acaacactggccaaaattgcttcgactacctcaactctagctccacagagaccaaaaatg
gtcagcaccactgtaccaccccgaaggcctaccacaaactcccctaaaacaaccctgagg
atgaatacagaaaaagtgcctgcccataccacacaggagcctatgactcattcccaacta
gcgcgaaataaatttgctgaagcaggagtagttgaaagtgcccgatcccatcccaccgct
ctctacatagtgctcccaattctgatactttgccttgtttccttcgggggattcctcctc
tggaagaactggaggttaaaaaatacaaacagcataaactttgataatccagtgtaccaa
aaaacaacagaggaagaccaagttcacatctgcagaagtcaggatggctacacctaccct
tcgaggcagatggtaagcttggaagatcacattgcttga
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