KEGG   Xenopus laevis (African clawed frog): 379874
Entry
379874            CDS       T01010                                 
Symbol
ran.S, ara24, gsp1, ran, ran-1, RanTC4, tc4, Xran
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03008  Ribosome biogenesis in eukaryotes
xla03013  Nucleocytoplasmic transport
xla03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    379874 (ran.S)
   03008 Ribosome biogenesis in eukaryotes
    379874 (ran.S)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    379874 (ran.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    379874 (ran.S)
   03009 Ribosome biogenesis [BR:xla03009]
    379874 (ran.S)
   03016 Transfer RNA biogenesis [BR:xla03016]
    379874 (ran.S)
   03036 Chromosome and associated proteins [BR:xla03036]
    379874 (ran.S)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xla04147]
    379874 (ran.S)
   04031 GTP-binding proteins [BR:xla04031]
    379874 (ran.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     379874 (ran.S)
Ribosome biogenesis [BR:xla03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    379874 (ran.S)
  Pre-60S particles
    379874 (ran.S)
Transfer RNA biogenesis [BR:xla03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    379874 (ran.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     379874 (ran.S)
   Spindle formation proteins
    379874 (ran.S)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   379874 (ran.S)
GTP-binding proteins [BR:xla04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    379874 (ran.S)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA G-alpha RNA_helicase Pox_A32 ArgoMid AAA_24 Septin AAA_7 TsaE SRPRB AAA_16 DUF5906
Other DBs
NCBI-GeneID: 379874
NCBI-ProteinID: NP_001080182
Xenbase: XB-GENE-865870
UniProt: P52301
LinkDB
Position
1S:complement(146486448..146498056)
AA seq 216 aa
MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK
FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLC
GNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMP
ALAPPEVVMDPALAAQYEADLQNAQATALPDEDDDL
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcagcccaaggagaacctcaagtccagtttaagcttgtgctggttggagatggtggc
actggtaaaacaacctttgttaaacgtcacttgactggtgaatttgagaagaaatatgta
gccacgcttggtgttgaagttcaccctctggttttccatactaacagaggcccgatcaaa
tttaatgtgtgggatacagctggtcaagaaaagtttggtggactcagagatggatattat
atccaggcccaatgtgccattatcatgtttgatgttacatcaagagtcacatacaagaat
gtaccaaactggcatagagatcttgtaagagtgtgtgaaaacatcccaatagtcttgtgt
ggtaataaggtggacatcaaggacagaaaagttaaagccaaatcaattgtcttccatagg
aagaagaatctgcagtactatgatatttctgctaaaagtaactacaactttgagaagccc
ttcctttggcttgcaagaaaacttataggtgaccccaatcttgagtttgtagccatgcca
gcccttgccccaccagaggttgtaatggatcctgcattggcagcacagtatgaggcggat
ttacagaatgctcaagccactgcactgccagatgaagatgatgatctgtga

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