Xenopus laevis (African clawed frog): 380138
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Entry
380138 CDS
T01010
Symbol
plod3.L, plod, plod3
Name
(RefSeq) procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 L homeolog precursor
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00310
Lysine degradation
xla00514
Other types of O-glycan biosynthesis
xla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
380138 (plod3.L)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
380138 (plod3.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xla01003
]
380138 (plod3.L)
Enzymes [BR:
xla01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
380138 (plod3.L)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
380138 (plod3.L)
2.4.1.66 procollagen glucosyltransferase
380138 (plod3.L)
Glycosyltransferases [BR:
xla01003
]
O-Glycan biosynthesis
O-linked Gal type
380138 (plod3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy
Anp1
2OG-FeII_Oxy_3
Motif
Other DBs
NCBI-GeneID:
380138
NCBI-ProteinID:
NP_001080446
Xenbase:
XB-GENE-5916727
UniProt:
Q7ZY90
LinkDB
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Position
3L:158397875..158417933
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AA seq
733 aa
AA seq
DB search
METRAALGLVLLVLCGLSLGESGRKEALRPDKLLVVTVATEATEGYLRFLRTARHFNYTV
RTLGLGHEWKGGDVARTVGGGQKVRWLKHELEQHKDQDDLIIMFVDSYDVVISGSPTELL
WKFQRFEHKVVFSAEGFCWPEWSLAESYPPITNGKRFLNSGGFIGFAPQLYQMVQLWKYK
DNDDDQLFYTKIYLDESMREKFDITLDHKSNIFQNLNGAIDEVVLKFESNKVRARNVAYD
TIPVVIHGNGPTKLQLNYLGNYVPNSWTHEGGCEVCDDDLLDLSMLEDDALPHVLLGVFI
EQPTPFIPQFLQRLVQLDYPRNRLSLYIHNSEVYHERHIEVFYKKYKDSFTSIKIVGPEE
AMSQGEARDMGMDLCRQDQTCDYYFSVDADVALTNPDTLYILIQENKKVIAPMVSRSGKL
WSNFWGALSPEGYYARSEDYVDIVQAKRAGVWNVPYIAHVYLIKGETLRAELSNKNIFTL
PQMDPDMSVCKSIRDKNVFLHISNRDEFGRLLSTSKYNTSRLHNDLWQIFENPVDWKEKY
IHENYSKIFEEDYYQQPCPDVYWFPVFSEVMCDEFVEEMENFGQWSGGKNQDQRLAGGYE
NVPTVDIHMTQIGYQEEWLKFLQEYIAPVTEKLFPGYYTKAKALLNFIVRYRPDEQPSLR
PHHDSSTFTVNIALNNKGIDYEGGGCRFLRYNCRVESPRKGWSFMHPGRLTHYHEGLPTT
RGTRYIMVSFVDP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggagactcgcgctgctctgggcctcgtcctgctcgtgctgtgcggcctgtcactgggg
gagtctgggaggaaagaggcgctgcggcccgataagctgctggtagtgacggtggccact
gaagccacagaaggctacctgagattcctgcgcacagcccgacactttaactacactgtg
agaactctgggtctggggcacgagtggaaggggggagacgttgcccgcacagtgggggga
ggacagaaggtgagatggctcaaacatgaactggagcagcacaaagaccaggacgacctc
atcatcatgtttgtggacagttatgatgtagtgatatcggggagccccactgagttgctg
tggaagttccagcggtttgagcacaaggtggtcttctctgcggagggattttgttggcct
gaatggtccctcgctgagagttacccccccatcactaatgggaagcgattcctcaactct
ggagggttcatcggctttgccccccagctctaccagatggttcagctgtggaagtacaaa
gacaatgatgatgatcagctcttttacaccaaaatttacttggacgagtcaatgagagag
aagtttgatatcactcttgatcacaagtcaaacattttccagaacctaaatggagcaata
gatgaagttgtgctgaagtttgagagcaataaagttcgagctcggaatgttgcctatgac
actattccagttgtgatacacggaaatggacccacaaagttacagctgaactatcttgga
aattatgtgccaaattcctggactcacgagggtgggtgtgaagtgtgtgacgatgatctg
ttggacctgtccatgttggaggatgatgcattgccgcatgtcttgctgggggtctttatt
gaacagccaaccccattcataccccaattcctgcaacgactggtccagttggattatccc
cgcaaccgcctgtcactctacatccacaatagtgaggtttatcatgagagacacatcgag
gttttctataagaagtacaaggacagtttcacgagtattaaaatcgtgggcccggaggaa
gccatgagccaaggggaggccagagacatgggcatggacctgtgccggcaggaccagacc
tgcgactactacttcagtgtggatgccgacgtggctttaaccaacccagacaccttgtat
atcctgatccaagagaataagaaggtgattgcacccatggtctctcgcagtggcaaactc
tggtccaatttctggggagccctgagccctgaaggctactatgcccggtctgaagactat
gtggatattgtccaggcgaagagggcgggagtctggaatgtaccatacattgcccacgtt
tatctaattaagggggagacactgagggctgaactatcaaacaagaatatcttcacgttg
ccacagatggacccagatatgtctgtgtgtaagagcattcgggacaagaacgtgttcctg
cacatcagtaacagagacgagtttggccgtttgctctccacctccaagtacaacacgtcc
cgcctgcacaacgacctgtggcagatctttgagaaccccgtggactggaaagagaaatac
attcatgaaaactattccaagatcttcgaggaggattattatcagcagccgtgcccagac
gtctactggttccccgtcttcagtgaagtgatgtgcgacgaatttgtggaagagatggag
aattttggccagtggtccggtggcaagaatcaggaccagcggctagcgggcggctatgag
aatgtgcccactgtggatattcacatgactcagattggctaccaggaggagtggctgaag
ttcttacaggaatacatcgctcccgtcacagagaagctcttccccggctattacacaaag
gccaaggctctgctgaatttcattgtacgatacagacctgatgagcagccctcgctccga
ccccaccacgactcctccactttcaccgtcaacatcgccctcaacaataaagggatcgac
tatgagggcggtggctgccgcttcctgcgctacaactgcagagtggaatcaccccgcaaa
ggttggtcctttatgcaccccggtcgcctgactcattatcacgagggtctccccacaacc
agagggacccgctacatcatggtctccttcgtagacccttga
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