Xenopus laevis (African clawed frog): 394282
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Entry
394282 CDS
T01010
Symbol
rfng.L, rfng, rfng-a, Xfringe2
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00514
Other types of O-glycan biosynthesis
xla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
394282 (rfng.L)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
394282 (rfng.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xla01003
]
394282 (rfng.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
394282 (rfng.L)
Glycosyltransferases [BR:
xla01003
]
Glycan extension
O-Glycan
394282 (rfng.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
CDO_I
Motif
Other DBs
NCBI-GeneID:
394282
NCBI-ProteinID:
NP_001080939
Xenbase:
XB-GENE-864975
UniProt:
P79949
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Position
9_10L:29743062..29756055
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AA seq
340 aa
AA seq
DB search
MKITYVGLIKVCFLVFLLLCATVLLNISWRQRDSSQSLQHCNSTCSAKYLETKLKEAHLT
GRHKKWETYRLDAKPTSATGQGHQHFAKEPLQIKDLFIAVKTTKKYHGNRLNLLMQTWIS
RAKEQTFIFTDWEDQELRQKAGDQMVNTNCSAVHTRQALCCKMAVEYDKFVLSDKKWFCH
LDDDNYLNLHALLDLLSTFSHSTDVYVGRPSLDHPVETVDRMKGDGSGSLKFWFATGGAG
FCISRGLALKMSPWASMGNFISTAEKVRLPDDCTIGYIIEGMLDVKMQHSNLFHSHLEHL
QRLPTESLLKQVTLSYGGPDNKWNVVRVNGAFSLAEDPTR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacttacgttggcctcattaaagtttgcttcttggtgttcctgttgctctgt
gccacagtactcctgaacatttcatggagacagagggattcttcacaatctttgcagcac
tgtaattcaacttgttctgccaagtacctggagaccaaattgaaagaagctcatttaact
ggtcggcataagaaatgggagacttacaggttggatgcaaaaccaacttctgctacagga
caaggacaccagcactttgcgaaggaaccattacagataaaagatttgtttattgcagta
aagaccacaaagaaatatcacgggaaccgtctgaatcttctcatgcaaacctggatctcc
agagcaaaagaacagacctttatatttacagactgggaagatcaagaacttcgacaaaaa
gcaggagatcaaatggtgaacacaaactgttctgcagtgcacacacgtcaggcgctctgt
tgcaagatggctgttgaatatgacaaatttgttttgtcagacaaaaagtggttttgccat
ttagatgatgacaattatctgaatctgcatgcacttctggatctgttgtcgacattctca
cacagcacagatgtttatgttgggaggcccagtttagatcatccagttgaaactgtggat
cgaatgaaaggtgatggctcgggctctctaaagttttggtttgcgactggaggtgctgga
ttctgtatcagtcgcggtcttgcacttaagatgagcccttgggcgagcatgggaaacttc
atcagcaccgctgagaaggtgcgtctccctgatgactgcactataggctacataatcgag
gggatgttagatgtgaagatgcagcacagtaacctgttccactcacacttagagcatctg
cagagacttccaactgaatctctcttaaagcaggtgactctaagctatggcggcccggat
aacaaatggaatgttgtgagagtgaatggagctttcagcctggcagaggatccaacaagg
tga
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