Xenopus laevis (African clawed frog): 397713
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Entry
397713 CDS
T01010
Symbol
psen2.S, ps-a, ps-alpha, ps-b, psen2, X-ps-a, X-ps-b
Name
(RefSeq) presenilin-2
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
397713 (psen2.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
397713 (psen2.S)
Peptidases and inhibitors [BR:
xla01002
]
Aspartic peptidases
Family A22: presenilin family
397713 (psen2.S)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Presenilin
DUF6541
Motif
Other DBs
NCBI-GeneID:
397713
NCBI-ProteinID:
NP_001081211
Xenbase:
XB-GENE-6252626
UniProt:
O12977
A0A974CQU9
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Position
5S:complement(42423124..42451084)
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AA seq
449 aa
AA seq
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MIKLSDSEDEECNERTSLITSESPPLPSYQDGVQASEGLETSYHRERQPDSTQNNEDVPN
GRTSGADAYNSETTVENEEEELTLKYGARHVIMLFVPVTLCMVVVVATIKSVSFYTEKDG
QLIYTPFSEDTTSVGERLLNSVLNTLIMISVILVMTIFLVLLYKYRCYKFIHGWLILSSL
MLLFMFTYIYLSEVFKTYNIAMDYPTLFMVIWNFGAVGMICIHWKGPLQLQQAYLIMISA
LMALVFIKYLPEWSAWVILGAISVYDLLAVLCPKGPLRMLVETAQERNEPIFPALIYSSA
MMWTVGMADSATADGRMNQQVQHIDRNTPEGANSTVEDAAETRIQTQSNLSSEDPDEERG
VKLGLGDFIFYSVLVGKAAATASGDWNTTLACFVAILIGLCLTLLLLAVFKKALPALPIS
ITFGLIFYFSTDNIVRPFMDTLASHQMYI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgataaaactctcagacagcgaagatgaggaatgcaatgagagaacatctttgatcaca
tcagagagtccccctctaccatcataccaagatggggtccaagcctcagaagggctggaa
acttcttatcacagggaaagacaaccagatagtacacagaataatgaagatgtacctaat
ggcagaacatctggtgcagatgcatataacagtgaaactacagtggaaaatgaggaagaa
gagttgactcttaaatatggtgctagacatgttattatgctctttgtcccagtcactctg
tgcatggtggtggttgttgctacaataaaatctgtcagcttctacacagagaaagatgga
cagctaatctacacgccattttctgaagataccacatcggttggcgagagactcttaaac
tctgtgcttaatactcttataatgatcagtgttatacttgtgatgaccatattccttgtg
cttctttataaatatcgctgttataagtttattcatggatggttgatcctctcatcttta
atgctgctttttatgtttacatatatatacctcagtgaagttttcaagacatacaacata
gcaatggattacccaactttgttcatggttatatggaattttggggcagtaggaatgatt
tgcattcactggaagggtccccttcagctccagcaagcttatctcatcatgataagtgca
cttatggctcttgtctttattaagtatctgccagaatggtcagcatgggtcatacttgga
gccatttctgtttatgatctgctagcagtgctttgccctaagggtcctttgaggatgctt
gtagaaacagcacaagaaagaaatgagcccatatttcctgcactcatatactcctctgcc
atgatgtggacagtgggaatggcagattccgctacagcagatggaagaatgaatcagcaa
gtgcagcatatagacagaaacacacctgaaggtgcaaacagcacagtggaggacgctgca
gagaccaggattcaaacacaaagtaatctctcttctgaggatccagatgaggaaagagga
gtgaagcttggtcttggagacttcatattctacagtgtgctagttggaaaagcagctgca
actgcaagcggagactggaataccacattggcttgttttgtggccattttaataggttta
tgtctgacgctgttgttgctggcagttttcaagaaagctctccctgccctaccgatttct
atcacctttggtttgatcttctacttttctacagataatatagtacgccctttcatggac
acccttgcatcccaccaaatgtacatttag
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