Xenopus laevis (African clawed frog): 397855
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Entry
397855 CDS
T01010
Symbol
lfng.S, lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00514
Other types of O-glycan biosynthesis
xla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
397855 (lfng.S)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
397855 (lfng.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xla01003
]
397855 (lfng.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
397855 (lfng.S)
Glycosyltransferases [BR:
xla01003
]
Glycan extension
O-Glycan
397855 (lfng.S)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
397855
NCBI-ProteinID:
NP_001081471
Xenbase:
XB-GENE-17334134
UniProt:
P79948
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Position
9_10S:complement(90895073..90906460)
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AA seq
375 aa
AA seq
DB search
MLKNWGKKLLLSIVGATLTCLLVLVVDQQSRHMLETQSDHEPGSAAAVHLRADLDPANPG
DGGDPANSAQDSGTFSAYFNKLTRVRRDVEQVAAPSKDSAAPEEDITANDVFIAVKTTKK
FHRSRMDLLMDTWISRNKEQTFIFTDGEDEELQKKTGNVISTNCSAAHSRQALSCKMAVE
YDKFIESDKKWFCHVDDDNYVNVRTLVKLLSRYSHTNDIYIGKPSLDRPIQATERISESN
MRPVNFWFATGGAGFCISRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIESVLGVK
LIRSNLFHSHLENLHQVPQSEIHNQVTLSYGMFENKRNAILMKGAFSVEEDPSRFRSVHC
LLYPDTPWCPWKAAY
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaactgggggaagaagctgctgctgtctatagtgggtgcaactctcacctgc
ctgctggtgctcgtggtggatcagcagagtcggcacatgctggagacacagagtgaccat
gagcccgggtccgccgccgctgtccatttacgggcagatttggaccccgccaaccccggg
gatgggggagaccccgctaacagcgcccaggattccggcaccttctcggcttatttcaac
aagctcaccagggtgaggagagacgtggagcaggtggcggccccatccaaagattccgcg
gctcccgaggaagacatcaccgccaacgatgtgtttatagccgtgaagaccaccaagaaa
ttccaccgctcccgaatggacctgctcatggacacgtggatctccagaaacaaggagcaa
actttcatcttcactgatggggaagacgaagagcttcagaaaaagacaggcaatgtcatt
agtacaaactgctcagctgctcacagtcgccaagccctttcctgcaagatggcagtggaa
tatgacaagttcatagagtctgacaagaagtggttctgccatgtggatgatgataactat
gtaaatgtccggacgctagtgaaactgctgtctcgttactcccacaccaatgatatttac
attgggaagcccagcttagaccggcctatccaagctacagagcggatcagtgagagcaat
atgcgtcctgtcaacttttggtttgctactggaggagccggcttctgtattagccgaggg
ttggcccttaaaatgagtccatgggcaagtggaggacatttcatgaatacagcagaaaag
atcaggctccccgatgactgcaccattggttatatcatagagtctgtgttgggagtgaaa
cttattcgcagtaacctcttccattcgcatctggagaatctgcatcaagttccccagagt
gagatccacaatcaggtaaccttaagttatgggatgtttgaaaacaagaggaacgccatt
ttgatgaagggtgccttttccgtagaggaagatccttctcggttccgttctgtacattgc
ctactatacccagatactccctggtgtccgtggaaagctgcttactag
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