Xenopus laevis (African clawed frog): 398160
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Entry
398160 CDS
T01010
Symbol
ptprf.L, bnah2, LAR, ptprf, xptp-lar
Name
(RefSeq) protein tyrosine phosphatase receptor type F L homeolog precursor
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04514
Cell adhesion molecules
xla04520
Adherens junction
xla04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
398160 (ptprf.L)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
398160 (ptprf.L)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
398160 (ptprf.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
ig
PTP-SAK
Tc-R-P
V-set
Interfer-bind
DSPc
Y_phosphatase3
Fn3_VIN3
PTP-NADK
Fn3_PTPRU
PTPlike_phytase
Ig_5
Ig_VEGFR-1-like_5th
Insulin_TMD
DUF3377
ICAM_N
Motif
Other DBs
NCBI-GeneID:
398160
NCBI-ProteinID:
NP_001081987
Xenbase:
XB-GENE-866423
UniProt:
Q9IAJ0
LinkDB
All DBs
Position
4L:83898475..84533076
Genome browser
AA seq
1788 aa
AA seq
DB search
MVPCSCLSLLILLAIVLCCSITLTQADHEPVFVRKPDDQIGISGGVASFVCQATADPKPR
ITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINSSAKLT
VLEEEQLPHGFPVIDMGPQLKVVEKTRTATMLCAASGNPDPEITWFKDFLPVDTASSNGR
IKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSNHEV
MPGGSVNLTCVAVGAPMPYVKWMAGLEELTKEDEMPVGRNGLELTNIKDSANYTCVAISS
LGMIEAVAQITVKALPKPPLDAMVTETTATSVTLTWDSGNPDPVSYYVIQYKPKASESSF
QEVDGVATTRYSIGGLSPFSEYEFRIIAVNNIGRGPPSEVIEAQTGEQAPSSPPLKVQAR
MLSASTMLVQWDLPEEPNGQIRGFRVYYTTDPHLPFSMWQKHNVVDNHLTTIGSLTTGTT
YSIRVLAFTSVGDGPPSEIIQVKTQQGVPAQPVDFQAEAETDTRILLTWLLPPQERITKY
ELLYWEGTNGEQHKLLFHPASSYAVEGLKPDTLYHFRLAAWSDTGVGVYTPAIQATTAQS
MPSAPPRKVEVDSVNSTSVRVTWKSPLPTKQNGQIRGYQVTYVRLEGGEPRGNPIIKDVM
LSEAQDAVITGLSPETTYSITVAAYTTKGDGARSKPKVVSTTGAVPGKPTMMISTTVQNT
AMIHWHPPREIVGELLGYRLQYKRVDEDRFITIDFGKNEHHHTVTGLHKGASYIFKLSAK
NRAGAGEEYEKEISTPEEVPSGFPQNLQVVGLTTSTTEVSWEPPVLSERNGKITNYTVVY
RDINSQQDLTNITRDTYITLVNLKPDTTYDIKVRARTSKGAGPLSPSIQSRTMPVDQVFA
KNFRVNAVMKTSVLLSWELPDSYKSAVPFKIFYNNQNVEVDGHSMRKLISNLKPDTDYSF
VLMNRGSSAGGLQHRVSIRTAPDVLKSKPSSANKYMEEGRFTLQLPQVQTTATVRWYYIV
VVTLDSSSRGMNSRWQSPEEMELEQILEAINQGTRRHRRQTSKIKPYIAARVNTLPESFT
LGDNKEYNGFINKPLNPELSYTCFVLAALEDGDTKKYAASPYSDDIVVEVSSLAKQQEEP
EMLWVMGPVLAVILIIIIVIAILLFKRKRTNSPPGKDDQSVGLKDCLLAHSSDPVEMRRL
NYQTPGMREHPPIPISDLADNIERLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKN
RYANVIAYDHSRVILTSVDAVPGSDYINANYIDGYRKQNAYIATQGPLPETITDFWRMMW
EQRTATIVMMTRLEEKSRVKCDQYWPSRGSETYGMIQVTLMDTVELATYTVRTFTVYKNG
SNEKRDVRQFQFMAWPDHGVPEYPTPILGFLRRVKACNPPDAGPMFVHCSAGVGRTGCFI
VIDAMLERVKLEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAVMCGVTEVPARS
LYAHIQKLSQVPPGESVTSMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIMPYELS
RVSLQPIRGVEGSDYINASFIDGYRQQKGYIATQGPLAETTEDFWRMLWEHNSTIVVMLT
KLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQ
FTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERM
RYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atggtgccttgctcatgcttgtccctgctaatattgctggcaatagtactttgctgctcg
atcacattgacacaagcagaccatgagccagtctttgtcaggaagcccgatgaccagatt
ggaatatcaggtggcgtggcctcttttgtgtgccaagcaacagcagaccccaagccacgg
attacctggatgaagaaggggaagaaagtcagttcccagcgctttgaggtaatagagttt
gacgatggatcaggatctgtccttcgaattcaacctctccgtgtacatagagacgaagca
atatatgagtgcactgcaactaacagcgttggcgagatcaacagcagtgctaagctaaca
gtcctggaagaggagcagcttccccatggatttccagtcattgacatggggcctcaacta
aaagttgtggagaaaactcgcacagcaaccatgctttgtgcagccagtggcaatcctgat
ccagaaataacctggttcaaagatttccttcctgtagacacagcatcaagtaatggtcgc
attaagcaacttcgttcaggagccttgcagatagaaaacagcgaggaatctgatcagggc
aaatatgaatgcgttgcaacaaacagcgcagggacacgttactccgctcctgctaacctc
tatgtgcgcgtccgtcgagtggcaccaagattttcgatccctcccagtaaccatgaagtg
atgcctgggggcagtgttaacttaacatgtgtggcagtgggtgcccccatgccctatgtc
aaatggatggctggccttgaggaactcaccaaagaagatgaaatgcctgtgggccgcaat
ggtttggaactcacaaatattaaagattctgccaattacacctgtgttgcaatctcctca
ttaggcatgattgaagcagttgcacagatcactgtgaaagcattgccaaaaccacctttg
gatgctatggtaaccgaaactacagccactagtgtcaccctaacctgggactctggcaac
ccagacccagtctcttattacgtgattcagtacaaacccaaagcttcagaaagctcattt
caggaagttgatggagtggcaacaactcggtacagtattgggggactcagccccttctca
gaatatgaatttcgcatcattgcagtcaacaatattggtcgaggacctccaagtgaagta
atagaggctcaaacaggagaacaggctccctcaagcccacctttgaaagttcaagcccgt
atgttaagtgccagtactatgctagttcagtgggaccttccagaagaaccaaatggtcag
atcagaggtttccgggtttattacactactgatccacatttgccttttagtatgtggcaa
aaacacaatgttgttgacaaccacttgacaacaataggaagtctgaccacaggaaccact
tacagcatccgtgttcttgctttcacatctgtgggggatgggcctccttctgagataatt
caggtcaaaacacagcagggagtccctgcacagcctgttgattttcaggcagaagcagaa
accgacacacgcatattgctcacatggcttctcccaccacaagaacgcattaccaaatat
gagctgctttactgggaaggaacaaatggagaacagcataagcttttgtttcaccctgcc
tcctcttacgctgtggagggtctgaaaccggacacgctttatcatttccgattagctgca
tggtcggacactggagttggggtttacaccccagcaattcaagctacaactgcacaatct
atgccgagtgcaccaccgaggaaggttgaagtagactctgtaaactccacatctgtgcgt
gtgacatggaaatctcctctaccaaccaagcaaaatggacaaattaggggctatcaagtc
acttatgttcgtctagaaggtggagagcctcgagggaatcccatcataaaagatgttatg
ctttcagaggctcaagatgctgttatcactggcctctctcctgagaccacttattccatc
actgtagccgcctacactactaaaggagatggtgctagaagcaaacccaaggttgttagc
acaacaggagctgtgcctggtaaaccaactatgatgatcagcaccacggttcagaacact
gctatgatccattggcatcccccgagagagattgtgggagagttgttaggatatcgcttg
cagtacaagcgagtggatgaagacaggtttattactattgactttggcaagaatgaacat
caccacacagtgactgggctacataaaggtgcaagctatatattcaagctttctgctaaa
aatcgtgctggtgcaggggaggaatatgagaaggaaatttccacacctgaagaggttcct
agtggttttccccaaaaccttcaagtagttggacttaccacatctacaactgaagtgtcc
tgggaaccaccagtgttgtctgagcgcaatggaaagatcaccaactacacagtggtgtat
cgtgacatcaatagccagcaggatctcaccaatatcactcgggacacatatataacacta
gtcaacctcaagccagacaccacctatgacatcaaggtcagggcaagaacaagcaaaggt
gctggccctctaagtcctagcattcaatcacgtaccatgcctgttgatcaagtgtttgca
aagaatttcagagtaaacgccgtgatgaaaacctctgtcttgctaagctgggaactgcct
gattcttacaaatcagccgtgcctttcaagatattttacaataatcaaaatgtagaagtt
gatggacactctatgcgcaaattgataagtaatctcaagccagatacagactactccttt
gtactgatgaacagggggagtagtgcaggcggactgcaacaccgtgtgtccatccgcaca
gcaccagatgttcttaaaagcaagccttcttctgccaacaaatacatggaggagggcagg
ttcaccttgcagttgcctcaggttcagactactgccacagtaaggtggtattatattgtg
gttgtcacattggacagttccagtagaggtatgaattctcgctggcaaagccctgaagag
atggaactagaacagatacttgaagcaattaaccagggaacccgtcgtcatagaagacag
acaagcaagattaagccatacatagcagcccgagtaaatacacttccagaatctttcact
ttgggcgacaataaggaatacaatgggttcatcaacaagcctctgaatccagaattaagc
tacacctgctttgtgctggctgcactagaagatggggacactaaaaagtatgcagccagc
ccatactcagatgatattgtagtggaggtgtcctcactggccaaacaacaggaagagccg
gaaatgctttgggtcatgggtcctgttctggctgtaattcttataataattattgttatt
gccattctgcttttcaaaaggaaaaggaccaactcccctccaggcaaagatgaccagtca
gtaggacttaaggactgtctcctcgctcactcctctgatccagttgaaatgagacggcta
aactaccaaactccaggtatgagagaacaccctccaatcccaatctctgacctagcagac
aatattgaaagactgaaggccaatgatggactcaagttctctcaggaatatgagtctatt
gatccaggtcagcaattcacctgggagaattcaaatctagaagtaaacaaaccaaagaat
cgctatgcaaatgttattgcatacgaccactcaagggtgattcttacctcagtagatgca
gtccctggaagtgattacattaatgccaattacatagatgggtacaggaaacagaatgcc
tatatagctacacagggcccactgccagagacgatcaccgatttctggcgaatgatgtgg
gagcagagaacagccactattgtcatgatgactcggctggaggaaaaatcaagggtgaaa
tgtgaccagtactggcccagtcgtggctcagagacgtatggtatgatccaagtcacatta
atggacacagtagagcttgcaacctacacagttaggactttcacagtatataagaatggc
tccaatgagaagagggatgtcaggcagttccagtttatggcctggcctgatcatggggtc
cctgaatatcctactcctatccttggatttcttcgcagagtaaaagcctgtaatccacca
gatgctggtcctatgtttgttcattgcagtgctggtgtgggcagaacaggctgctttatt
gttattgatgccatgctagaacgggtgaaactggagaaaactgtggatatctatggccac
gtgacatgcatgcgctcccaacgaaattatatggtgcaaacagaggaccagtacatcttt
atccatgaggctttgcttgaagcagtaatgtgtggggtcactgaagtgccagcgcgcagt
ctctatgctcatatccagaaactgtctcaggtccctccgggcgagagtgttacctccatg
gaactagagttcaagcttttggccaactctaaagcccacacctcaagatttatcagtgcc
aacctcccatgcaacaagttcaaaaacagactggtaaacatcatgccatatgaactgagc
cgtgttagtctacagcccattcgaggtgttgagggatcagattatatcaatgcaagcttc
attgatggctacaggcagcagaaaggctacattgctactcaggggccattggctgagacc
actgaggatttctggagaatgttgtgggaacataactccaccattgtggtgatgctgaca
aagttgcgagaaatgggcagggagaagtgccatcagtactggcctgcagagcgctcagca
cggtaccagtattttgtggtggaccctatggccgagtacaacatgcctcagtacatcctg
cgggagtttaaagtgacagatgcaagggacggccaatcacgtacaattagacaattccag
ttcactgactggcctgaacaaggagtgccaaaaacaggggaaggctttattgactttatt
gggcaggtgcacaaaaccaaggagcagtttggacaggatgggccaatcactgttcattgc
agtgctggtgtggggcgcactggagtattcatcactctcagtattgtactggagcgcatg
aggtatgagggtgtggttgacatgtttcaaacagtgaagactttaagaacacagcggcca
gcaatggtacaaacagaggaccagtatcaactgtgctatcgagccgcactggagtatctg
ggcagctttgaccactatgcaacataa
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integrated database retrieval system
