Xenopus laevis (African clawed frog): 398322
Help
Entry
398322 CDS
T01010
Symbol
ltbp1.S, ltbp1, ltgf-1, TGFbBP1
Name
(RefSeq) latent transforming growth factor beta binding protein 1 S homeolog precursor
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
398322 (ltbp1.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xla04990
]
398322 (ltbp1.S)
Domain-containing proteins not elsewhere classified [BR:
xla04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
398322 (ltbp1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_MSP1_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
398322
NCBI-ProteinID:
NP_001082254
Xenbase:
XB-GENE-865760
UniProt:
Q8JFZ4
LinkDB
All DBs
Position
5S:38029495..38146537
Genome browser
AA seq
1399 aa
AA seq
DB search
MDTKLICLFFLFSVPSLAVGNQTGRIKVVFTPSICKVTCTKHHCQNSCEKGNTTTLISEN
GHSADTLTSSNFRVVICHLPCMNGGQCTARDKCHCPPNFTGKLCQIPVQNGLQKQYPHQQ
PAQKATGSQVIHSTHTLPLTMTGQQGIKVNFPPNMVNIHVKHPPEASVQFHQVSRIGSSS
STQKKDSQLGQTQFSYHSAQKHQLPHNTYPRQQSIPNVYPISTRNQLGRCFQETVGSQCG
KPLPGLSKQDDCCGTIGTSWGFNKCMKCPKKQSHYGPSQIMECPQGYKRINATFCQDINE
CQMQGVCPNGECLNTIGSYRCKCKVGYVPDPSLSSCVVDNNPIVFEEKGPCYRFFSPGKQ
CMHPIAVQLSQQICCCTVGKAWGPHCDKCPVPGTAAFKEICPGGMGYTVPNMPRNPIRVP
PPNRPITAQPPIRTTRPPIVTKEEPIEALSVSEKNHPHVPERKDEATDDGQANVPFEERR
VEGGQPQFSPGISTLNLDGQFPVVVEKSSPPIPVALAPDVSTASASQVIAPTQVTEINEC
AVDVDICGEGNCINLPVGYTCLCFTGYKLNEQKTKCVDINECAKDPQICSHGRCENTKGR
FLCICHAGYMANEQGTDCVDVNECLRPHPCEDDGLWFNTIGSFRCEYCEKGFRKNQRGDC
EDINECLNELSCPHDRCVNSVGSYACVPCPDGFNGLNGQCFDINECQEDTSLCANGDCSN
LEGSYRCTCQRGYDVTSDGKECIDINECQSGTLCLNGLCQNTEGSFVCSCHEGYQPAPSG
DQCNDIDECQNTDLCRNGQCRNTRGSFTCICNQGYKVSADGEQCEDIDECQEEAEVCLGG
GSCHNTEGSYECTCPDGFLLVDGIRCQDINECEQPELCTPNGECLNTEGSYHCICEQGFT
TSANERSCEDVDECANTTQCGSQGICENTEGSYRCLCYQGYQDSFDGQGCVDVNECEMLN
GVCGEARCENVEGSFLCLCADESQEYDPMTGYCRSHDVHGTNSFGESNNDSLLNTFSPSV
THDNTEENDEDYKDCYYNIIGDNFCQNVLAANVSKQECCCTLGAGWGDNCEIFPCPVIGS
DEFTEMCPEGKGYIPSKESMYEGNDISYQDADECMLFGKEICKNGYCLNTESSYECYCKQ
GTYYDPVKLQCIDNNECEDPSSCIDGQCINNEGSYSCFCTHPMILDESGKRCIQPKQEDT
SEPTEDTDVYQDFCWQELIEEFVCSQPLVGRRTTYTECCCLYGDAWGMQCALCPTKDSED
YAELCNLQYRPYGHDALIDPYTSHDSTPYEIPERYSYEELQAEECGILNGCENGRCVRVQ
EGYTCDCFDGYHLDMAKMTCVDVNECNELNSRMSLCKNAKCINTEGSYKCVCLPGYKPSA
KPNYCTALNSDKDDSELDK
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggataccaagctcatatgtctgttttttcttttctctgtgccttccctagcagtggga
aaccagacagggcgcatcaaggtggtcttcacacccagcatctgcaaagtgacctgcacc
aagcaccactgtcagaacagctgtgagaagggaaataccaccacgcttataagtgagaac
ggtcattctgctgacacactcacatcaagtaactttcgagtagtgatttgtcatttacct
tgtatgaatggaggccaatgtactgctcgagataaatgccattgcccacctaactttacc
ggcaaactatgtcagatcccagtgcaaaatggcttgcaaaaacaatacccgcatcaacag
ccagcccagaaagctacaggatctcaagttattcattctactcacacattgcccctcacc
atgacgggtcaacaaggaattaaagttaattttcctccaaatatggtgaatatccacgtg
aagcaccccccagaagcctctgtacagttccatcaagtgtccaggattgggagttcctcg
tctacacagaagaaggacagccagctaggccagacacagttctcttaccacagtgcccag
aaacatcagttaccccacaacacatatccccgccagcaatcaattccaaatgtgtatcca
atctcaaccagaaatcaacttgggcgctgtttccaagagaccgtgggctcacagtgcggc
aaaccacttccaggactttcaaagcaagatgactgttgtgggacaattggcacatcctgg
ggctttaacaaatgcatgaaatgcccgaaaaaacaaagccattatggaccttcacaaatc
atggaatgtcctcaagggtacaaacgaattaatgccacattttgtcaagatattaacgaa
tgtcagatgcaaggtgtctgccctaatggtgaatgtctgaataccattggcagttataga
tgcaagtgcaaagtgggatatgttccagatccgtctctgtcttcttgtgttgttgataat
aatcctattgtgtttgaagagaaaggtccctgttacagatttttcagtccaggaaagcag
tgcatgcaccctatcgcagtgcaacttagtcagcagatctgctgttgcaccgtgggaaaa
gcttggggccctcattgcgacaaatgccctgttcctgggacagctgcttttaaagaaatc
tgccctggcggtatgggctacacggtccctaacatgcctaggaatccaatacgcgttcca
ccacctaacagacccatcacagcacaacctccaattagaacaacacgtccaccaatcgtt
acaaaagaagaacctattgaagcactctctgtctccgagaaaaaccatccacacgtgcct
gaaaggaaagatgaagctacagatgatgggcaggcaaatgtcccatttgaagagagacgt
gtagaaggtggacaaccccagttttccccaggaatttcaaccctgaacttagatggacaa
ttcccagttgttgtagaaaaatcatcaccacccattcctgtcgcactggccccagatgtg
tctacagcaagtgctagtcaagttatcgctcctactcaagtaacagagatcaacgagtgt
gctgtagatgttgatatatgtggagagggtaactgcatcaacctacctgtaggatacaca
tgtttatgcttcacgggatataagctgaatgagcagaagacgaaatgtgttgacatcaat
gaatgcgccaaggatccccagatctgctcccatggccgatgtgaaaatacaaagggaaga
ttcctgtgcatttgtcatgctggatatatggctaatgaacagggaactgactgtgttgat
gtgaatgagtgtctgagaccacacccttgtgaggatgatgggctgtggtttaacacaatc
ggttctttccgttgtgaatactgtgaaaaaggattccgcaagaaccaaaggggtgactgt
gaagatattaacgagtgtctgaatgaattatcttgcccacatgatagatgtgttaacagt
gtgggctcctatgcttgtgttccttgtccagatggattcaatggactaaatggacagtgt
tttgacatcaatgaatgccaggaagatacttcactgtgtgccaatggtgactgctccaat
ctagagggatcctacaggtgcacatgtcaaaggggatacgatgtaacctccgatggcaag
gaatgtatagatataaatgaatgccagagtggaacgttatgcttaaatgggctatgccaa
aatactgaaggttcatttgtgtgctcctgccatgaaggctatcagccagctccatctggg
gatcaatgcaatgatattgacgaatgccaaaatacagacttgtgcagaaatggacaatgc
aggaatacaaggggatcatttacttgcatatgtaatcaaggttataaagtgtctgctgat
ggagagcaatgcgaagacatagatgaatgccaggaagaggctgaagtctgccttggaggg
ggaagctgccacaacactgaagggtcatatgaatgcacttgtccagatggcttccttctg
gtagatggtatacggtgtcaagatataaatgagtgtgagcagcctgaactttgcactcct
aatggggaatgtctcaacactgagggctcataccactgcatctgtgaacaaggctttact
acttcagccaatgaaagatcatgtgaagacgttgatgaatgtgctaacactacgcagtgt
ggcagtcaaggtatttgtgaaaatacagaaggctcctatcgctgcctctgttaccagggt
tatcaggactccttcgatgggcaagggtgtgtggatgtgaacgagtgtgaaatgcttaac
ggagtatgcggggaggcccgatgcgaaaacgtggaaggctcattcctctgtctgtgtgct
gacgaaagccaggaatatgaccctatgacagggtattgccgaagccacgatgtgcatggc
accaactcctttggagagagcaacaatgatagtttgcttaatactttcagtcccagtgtt
acccatgataatacagaggaaaatgatgaagattacaaggactgctactataatatcatt
ggggacaacttctgtcagaatgtgttggctgccaacgttagcaagcaagagtgttgttgt
acattaggagctggatggggagataattgtgagatcttcccatgtccagtcataggttct
gatgaatttacagaaatgtgtccagaaggaaaaggctacataccatcaaaggagtcgatg
tatgagggcaatgatatatcttatcaagatgctgatgagtgtatgttgtttggaaaagaa
atctgcaaaaatggctactgcttgaacacagagtctagttatgagtgctactgtaagcaa
ggcacatattatgatcctgttaagcttcagtgtatcgataataatgaatgtgaagaccca
agcagctgcattgacggccaatgcataaacaacgagggatcttacagctgcttctgcaca
caccccatgattcttgatgaatcaggaaaaaggtgtatccagcccaaacaagaggataca
agtgagccaactgaagacacagatgtttaccaagacttctgttggcaagagctgattgag
gaatttgtgtgtagccagcctttggttggaagacgtactacttatacagaatgctgctgc
ttatatggagacgcatggggaatgcaatgtgctctttgccctaccaaagactcagaggac
tatgccgaactttgcaaccttcagtacaggccttatggacatgatgctcttatagaccct
tacacatctcacgattccaccccatacgagattccagaacgttatagctatgaagagctg
caggcagaagagtgcggaatcttaaatggatgtgaaaatggaagatgtgtcagagtgcag
gaaggctatacatgtgattgctttgatggatatcatttggacatggccaaaatgacttgt
gttgatgtcaatgaatgtaatgagctgaacagcaggatgtccctttgcaagaacgccaag
tgtattaacacagagggttcctacaagtgtgtatgtctaccgggctataaaccatccgca
aagcccaactattgcacagcactgaactccgacaaagacgacagtgaacttgataagtaa
DBGET
integrated database retrieval system
