Xenopus laevis (African clawed frog): 398582
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Entry
398582 CDS
T01010
Symbol
lemd3.S, lemd3, man1, sane, xman1
Name
(RefSeq) LEM domain containing 3 S homeolog
KO
K19410
inner nuclear membrane protein Man1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
398582 (lemd3.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
398582 (lemd3.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
398582 (lemd3.S)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
DUF3810
Motif
Other DBs
NCBI-GeneID:
398582
NCBI-ProteinID:
NP_001082578
Xenbase:
XB-GENE-865571
UniProt:
Q7ZTB4
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Position
3S:90127289..90148215
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AA seq
781 aa
AA seq
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MAAAQLTDEELFSELKRSGIMPGPVTDSTRPVYLKKLKKLREEQRLRHGKVRVITNNNTV
AAPSESEGILKSGGDVTHKRYSRQSLAREAGKPSPILGFSSDESDVDAGLGAHGSRRSRT
NTPQPERKSPVQHQPGTADANADRRKVPGWWEMRRPRGDSEEDDDDEEEGTEEASNCRTM
NGSRHSYCRDYSDTDEEEQLGQDEQASRRSRRGSSKQAKEQSLDRDELAAWPGWSREVAG
VSHRHRGAARKSHTAADTDGAGNLKRKSNNHLESGYNKDPPRVYFPSNSLPPRMPQSNHT
AAPNHTKYSHYHYPDSKRQHHKVAEPEEALLQQFKRDEVSAAGRFSAHYLSMFLLTAACL
FFLLLGLTYLRMRGTSLPANENLTSTEDLNVDSKKNLMNTLQKLHEKLSKTAGDYICGNT
DHRNISVQEAKQYLRTLGQEYENEFNNTLAWILEHSATRDIGIKCVSDPGSILNITSVKY
LESTLPKMSFMCRIKRAVITVAHRSSILLVGVGVLFGVWRYIKYRWAKEEEETKQMYDMV
VKIIDVLKSHNEACQENKGLEPYTPIPHVRDSLILPQDRKKMKKVWDRAVEFLDANESRV
RTETQKIGGADFQVWKWIQPSSTCDKISVMPSKVWQGQAFHLDRRNSPPNSLTPCLKIRN
MFDPVMEIGDHWDLAIQEAILEKCSDNEGIVHIAVDKNSREGCVYVKCLSPEFAGKAFKA
LHGSWFDGKLVTVKYLRLDRYHHRFPQALTCSTPLKPSNTHMNSLLHLNLRTGTSNSQSC
C
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctcagttaacggatgaggagctcttttccgagttaaagcgctcggggata
atgcccggccctgttacagacagcacacggccggtttacctaaagaaactgaagaagttg
agggaagagcaaagacttcggcacgggaaagtgcgggtaattacgaacaacaacacagtg
gcggcgccttcagaaagtgagggaattctcaagagcggtggggacgtgacgcataagaga
tacagccgccagagcctagcgagggaagcagggaaaccctccccgatccttggcttcagc
tccgatgagtcagatgtagacgcagggctgggagcgcacgggagtcgcaggagcagaact
aacacaccccagcccgagaggaaatcgccggtgcagcatcagccgggtactgcagacgcc
aatgctgataggcggaaggtgccgggttggtgggaaatgcgaaggccgcggggggacagt
gaagaagacgacgatgatgaagaggaaggaacggaagaggcgtctaattgtcggactatg
aatggcagccggcactcttactgcagggattactcggacactgatgaggaggagcagttg
gggcaggacgagcaagcgagccgccggagtaggcgggggtcgagcaaacaggccaaggag
cagagtctggacagggatgagttggccgcttggccaggctggtcgagggaggtggctggt
gtgtctcatcgacatcgcggagccgccaggaagtcgcacactgcggcagacactgacggg
gcggggaatttgaaacgcaaaagcaacaatcacctggagagcggctacaacaaggatccc
cccagggtctattttccctccaacagcctccccccacggatgcctcagtccaaccacaca
gcagcccccaaccacacgaaatactcgcactatcactacccggactccaagaggcaacat
cataaggtcgcagagcccgaggaggcgctcctccagcaattcaagagggacgaggtgtct
gctgcagggagattcagtgcccattacctctccatgttcctcctcacagctgcctgcctc
tttttcttgctgctagggctcacctacctgaggatgagaggcaccagtcttcctgccaat
gaaaacttaacaagtactgaggaccttaatgttgatagtaagaaaaacctgatgaatacg
ttacagaaactgcacgagaaactatcaaaaacagcaggtgattacatatgtgggaacact
gatcaccgtaatatatctgtccaagaagcaaagcagtatttaaggacattaggtcaggaa
tacgaaaatgaatttaataacacattggcatggattttagaacactctgccacaagagat
attggtatcaagtgcgtttctgatcctggttccattttaaacataaccagtgtgaaatac
ctagagtcgactctgcccaagatgtcatttatgtgccgaatcaaacgtgccgttatcact
gtagcacacaggtcatccattctgcttgttggagttggtgtgctcttcggtgtatggcga
tacataaaatatcgttgggcaaaggaagaggaagaaacaaagcaaatgtatgacatggtt
gtaaaaattatagatgtcttaaaaagtcacaatgaggcttgtcaagaaaataaaggcttg
gagccttatacaccaatccctcatgtgcgtgattctttaatactgcctcaagacaggaag
aaaatgaagaaagtttgggaccgggcagtggaatttctggatgccaatgaatctagagta
cgcacagaaactcagaaaataggtggagcagacttccaggtgtggaaatggattcagcca
tcttcaacatgtgataaaatttcagtcatgccttctaaagtttggcaaggacaagctttt
catttggatagaagaaattctcctccaaatagtctgactccctgtttaaaaatacgtaac
atgtttgatccagttatggaaattggagatcattgggacttggcaattcaagaagcaata
ttagagaaatgtagtgataatgaggggattgttcacattgctgttgataagaattcacgt
gagggttgcgtatatgtgaaatgtttatctccagaatttgcaggaaaggcatttaaagct
ctgcacggctcatggtttgatggaaagctggtgactgtgaaatacctgcgattagatcga
tatcatcatcgcttccctcaggcccttacatgcagcactcctttaaagccttcaaacaca
cacatgaactcactgttacacttaaatcttcggactggcacttcaaattctcagtcatgc
tgttga
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