Xenopus laevis (African clawed frog): 398685
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Entry
398685 CDS
T01010
Symbol
trpm4.L
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4 isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
398685 (trpm4.L)
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
398685 (trpm4.L)
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
GapR_DNA-bd
Motif
Other DBs
NCBI-GeneID:
398685
NCBI-ProteinID:
XP_041425588
Xenbase:
XB-GENE-960845
UniProt:
A0A8J1L7S4
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Position
7L:complement(123913061..123989987)
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AA seq
1222 aa
AA seq
DB search
MASNIQKDQSWIPKLFKKKTCTTFIEDTNSIGQTKLCQCGAFMINHVSVAMEDNFGAAIV
SKWNSAEHTTEEPTDAYGDIEFVGAGRKQSKFIRLSDDTDPGSIYSLITNNWKIPPPNLV
VSVVGGDGDFKMKTWLKDILRKGLVKAAQSTGAWIMTGGMQVGIGKYVGEAVRDHATANS
NSRTKVVAMGIAPWGIVHNRQSLVNPKGSFPATYYMDNVDGPTYSLDNNYSVFLLADDGS
HGQMGGETSFRFKLEEHISRQKTGVGGKGSIEIPVLCMLIAGESKMLERVYNATKSPIPC
LLVAGSGGVADCLAEILEESIALESIRGLIEEKLKHHFPKENLTKMVEKVERIVENRDLV
TVYSDSDGTEDFETVILKALVKACKKHSSEATEYLDELKLAVAWNREDIAKTELFHGEIL
WRATDLDDTMTDALINNKPRFVKLFVDNNLNIVDYLTYGRLEELYSSVLDNTLLYQLLKH
KHDERRSSNKDHHHHHHQFPLMESNGKEVEFKLYEVSKVLRDLLGDVCAPFYTHVLGNMK
GSVHRRHSSRKSQEQISVEKYEPNKSTCPWIDLFIWAILQNRDEMATYFWEMGSEAVTSA
LAAMKILRDLSRMESEAEESLAMRDLAAKFEQLAIGVFNECYRNSENRAFKLLVRRSSIW
GGATCLQLAYEADARNFFAQDGVQSMLTENWWGQMAQNTPVWAMVLTFFCPPLIYTDLIT
FKSIDHENGIESAHRMEMDSLDTDIKTTVAEIMEGEDRQDNEKAEKVPLKKLSVKKSKKG
QASEAEIIKEKQRPKWMQRWKQFWSAPVTAFFGNVVMYFAFLFLFSYVLLLEFKMPPPDG
PANSELILYFWVFTMVCEEIRQSFFVGTMPVAQKLRQYLQDSWNHVDIIALCLFIIGVIC
RMFDATFEAGRTILCFDFMVFTLRLIHIFAVNKQLGPKIIIVRKMMKDVFFFLFFLGVWL
IAYGVTTEGLLHPSDMRLSWIFRRVFYRPYLQIFGQIPQEEFDASKISSSNCTDDPIAIM
LEEAEPCTNTYANWLVILLLVIFLLVANILLLNLLIAMFSYTFSKVQGNSDIYWKFQRYN
LIVEYHNRPALAPPFIIISHINAFIKRKIRKVASQKIRHFMLELTETLDNRMIIWEAVQK
ENYMVNVAKHKRDSDTERLRRTSQKVDTALKHLNEIKEHDRRLKAMETELEYCRNALSWI
VDALQQSEVVKTTRSPPVCIEG
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaacattcagaaagaccagagctggattcccaagttatttaaaaagaaaaca
tgcactactttcatagaagacacaaacagcatcggccaaacaaaactgtgccagtgcggg
gcattcatgataaatcatgtgtctgtggcaatggaggataattttggcgcagccatagtc
agtaagtggaactctgcagaacacacaacggaggagcccaccgatgcttacggagatatt
gagtttgtgggtgctgggcggaaacaaagcaagttcatccgcttgtccgatgacactgac
ccaggaagcatttacagtctcataacgaacaactggaagatccctccaccaaacctggtg
gtctctgttgttggtggagatggggactttaaaatgaagacatggctgaaggacatcctg
aggaagggtctggtcaaggctgcgcagagcacgggcgcctggataatgacaggagggatg
caggtgggcattggcaaatatgtgggggaggcagtgagagaccatgccaccgccaactcc
aattccaggaccaaagttgttgcaatgggaatcgctccctggggaattgtacacaaccgg
caaagcttagtgaatcccaagggctcttttccagccacatattacatggacaacgtggat
ggacccacttattccctggacaacaattactctgttttcctcctcgcagatgatgggtca
cacggacagatgggcggcgagacaagtttccgattcaagctggaggaacacatttcccga
caaaaaactggagttggaggcaaaggaagcattgaaatcccagtcttgtgcatgttgata
gctggagaatcaaaaatgctggagagggtgtataatgccacaaaaagccctatcccatgt
ctgctggtggctggctcaggtggtgtcgctgactgcttggctgaaatcctggaggaatcc
atagcattggagtctattaggggtctgatagaagaaaaactaaaacatcattttcctaag
gagaacctaacaaaaatggtggaaaaggttgagaggattgtggagaacagggatctggtt
accgtgtattcagattctgacgggacggaggactttgaaactgtgatccttaaagcactg
gtaaaagcttgcaagaaacattcaagtgaagccacagaatacctggacgagcttaaactg
gcagtagcctggaaccgagaggacattgccaaaactgagctattccatggggagatcctc
tggcgggcaactgaccttgatgacacaatgactgatgctctgataaacaacaagcccagg
tttgtgaagctttttgtggacaataacttgaacattgtggattacttgacctacgggcgg
cttgaggaactctacagttctgtgctggacaatactctcctctatcaattgctaaagcac
aaacatgatgaacggaggagttcaaacaaagatcatcatcatcatcatcatcaattccca
ctgatggaatcgaatggcaaagaggtggaattcaagctctatgaggtttccaaggtccta
cgggacctgttgggtgatgtctgtgctcctttctacacacatgtcctgggaaatatgaaa
ggttctgttcacagaagacactcaagcagaaaatctcaggagcaaatctctgtggaaaag
tatgaaccaaacaagtcaacgtgtccatggatagatctctttatttgggcaatattacag
aatcgagatgaaatggccacttacttctgggaaatgggctctgaggctgtaacctccgct
ctggctgctatgaagattctcagggatctttcccggatggagtcagaggctgaagaatct
ttagccatgagggatctggctgctaagtttgagcaacttgctataggagtgtttaatgaa
tgctacagaaacagtgaaaatcgagcatttaagctccttgtgcggcgctccagcatctgg
ggaggagccacgtgtctgcagttggcttacgaggctgatgcccgcaacttctttgcccag
gatggtgttcagtcaatgttaacagagaattggtgggggcagatggctcagaacacccct
gtgtgggcgatggtgctgactttcttctgtccgcctctgatttatacagacctgatcaca
tttaagtctattgaccatgaaaatggaatagaaagtgctcatcgaatggaaatggacagc
ctggatactgacataaagactactgttgcagaaattatggaaggggaagacagacaagac
aacgagaaagcagaaaaagtaccgctcaaaaagttgagtgtgaaaaaatcaaaaaaaggg
caggcctcagaggcagaaatcatcaaggagaaacagcggccaaagtggatgcaacgctgg
aagcaattctggagtgcacccgtgacagccttctttggcaacgtggtcatgtactttgct
ttcctcttccttttttcctacgtgctgcttttggaattcaagatgcctccaccagatggc
ccagcaaactcagagttaatactttatttttgggtttttacaatggtctgtgaagagata
cggcagagtttctttgtgggcaccatgcccgtggcgcagaagctcaggcagtacttgcag
gattcgtggaaccatgttgacatcatcgcgctatgcctctttatcatcggggtgatttgc
aggatgtttgatgcaacgtttgaagctggccggacaatcctctgctttgacttcatggtc
tttactcttaggctgatccatatctttgccgtcaacaaacagctggggccaaaaatcatt
atagtcagaaaaatgatgaaggatgtttttttctttctcttttttctgggtgtctggctc
attgcttatggagttaccaccgagggcctgcttcatcccagcgacatgcgtctcagctgg
atcttccgccgggtcttctacaggccttatctccaaatttttggtcagatcccacaggag
gagtttgatgcttccaagatttcttcctccaactgcacggatgaccccatcgccataatg
ctggaagaggcagaaccttgcaccaacacatatgccaactggctggtcattctcctgctt
gtcatttttctgctggttgccaatatccttcttctgaacctgctgattgccatgttcagt
tacaccttctccaaggtccagggcaacagcgatatctactggaaattccagcgatataac
ctgatagtggagtatcacaaccgcccggccctagctccaccattcatcatcatcagccac
attaacgctttcatcaagcgcaagatccgcaaggtggcatctcagaagatccgacatttc
atgctggaactgacagagactctagacaaccgaatgatcatctgggaagccgtgcagaag
gagaactacatggtaaatgttgctaagcataaaagggacagtgacacagaacgtctgcgc
agaacctcacaaaaggttgatacggccttaaaacatctgaatgagatcaaggaacatgac
cgaaggttgaaagcaatggaaactgaactggaatactgccgtaatgcactttcctggata
gtcgatgcacttcaacagagcgaggttgtgaaaaccactagaagtccacctgtttgtatt
gaaggttga
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