Xenopus laevis (African clawed frog): 444716
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Entry
444716 CDS
T01010
Symbol
tnfrsf11b.S, ocif, opg, tnfrsf11b, tr1
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11b S homeolog precursor
KO
K05148
tumor necrosis factor receptor superfamily member 11B
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
444716 (tnfrsf11b.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
xla04050
]
444716 (tnfrsf11b.S)
Cytokine receptors [BR:
xla04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
444716 (tnfrsf11b.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_TNFRSF11B
TNFR_c6
tRNA-synt_1b
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
444716
NCBI-ProteinID:
NP_001086287
Xenbase:
XB-GENE-940092
UniProt:
Q6GLN3
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Position
6S:complement(123933048..123954106)
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AA seq
387 aa
AA seq
DB search
MYRMISRTLLVLLHISLAKGNSVPQKYSHYDPRTSMYLQCDHCPPGTYVKQDCSTEKNTE
CAPCPSHHYNDRWNSNTECQFCNVVCKELQYVKQQCNSTHNRLCECAAGFYLDLEFCVPH
KKCHPGYGVAQEGTPESDTVCRPCPEGTFSDSTSATARCQKHTDCKKLGIKVAYQGDSDH
DTLCQPEGSFCEIDITLCQEAFFRFVPNNWLTAIAQRPPSTMVSSQYIEGVQEKRDPQEH
AFHLFKLWKDHNRESESGKHLFQDLQVCEKKVSKHIGRLNVTATQLRTLMKSLPGNKISK
RELETTVKICRQPDQVLKLLNLWRNKNGGDTINLLKVIKTNRLQKMLRRTIKKLEQFLNS
DEMYRLYQKLLLEIFGSQTQPAKVDFK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtacaggatgattagccgcacgctcctggtgctgctgcacatatctcttgcaaaagga
aattctgtaccacaaaagtacagccattatgatccaagaacgtctatgtatttgcaatgt
gaccattgcccaccaggaacatatgttaagcaggactgtagcactgagaagaatacggag
tgtgctccttgcccttcccatcattacaatgacaggtggaactccaacacagaatgccag
ttctgcaatgtggtctgcaaagagcttcagtatgtaaagcaacaatgcaacagcacccac
aacaggctgtgcgagtgtgctgcagggttctatttggacctagaattctgtgtacctcac
aaaaagtgccaccctggttatggagttgcacaagaaggaacacctgaaagtgacactgtt
tgtagaccatgtcctgaaggaacattctcggattcaacatcagcaactgcaagatgccag
aaacacacagactgcaaaaagttgggcatcaaggtggcctaccagggtgattcagaccat
gatacactgtgtcagcctgaaggatcattctgtgaaatagacatcacactttgtcaagaa
gcttttttccgattcgttcctaacaactggttaacagccattgcgcaaagacctccaagc
accatggtttcatctcaatatatagaaggtgttcaagagaagcgggacccccaggaacat
gccttccacttgtttaaattatggaaagatcacaacagagaaagtgaatcaggcaaacac
ttgtttcaagatctccaagtttgtgagaaaaaagtatcaaaacatatcggccgtttgaac
gtgaccgctacacaattgaggaccttaatgaaaagcttgccaggaaataagatcagcaaa
cgggagttagagaccacagtaaagatttgcaggcaacccgaccaagtcttaaagctcctc
aatttgtggaggaacaaaaatggcggcgataccatcaacctcctaaaggtcatcaaaact
aatcgacttcaaaaaatgttgcgcaggaccattaagaagcttgaacaatttctcaatagc
gatgaaatgtacagactgtaccagaaactgcttttggaaatatttggcagccaaacacaa
cctgctaaggtggactttaaatag
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