KEGG   Xenopus laevis (African clawed frog): 446225
Entry
446225            CDS       T01010                                 
Symbol
aff4.L
Name
(RefSeq) AF4/FMR2 family member 4 isoform X1
  KO
K15185  AF4/FMR2 family member 4
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    446225 (aff4.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xla03021]
    446225 (aff4.L)
Transcription machinery [BR:xla03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     446225 (aff4.L)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 446225
NCBI-ProteinID: XP_018107623
Xenbase: XB-GENE-6251714
UniProt: A0A1L8GXN0 A0A974DCN5
LinkDB
Position
3L:45238797..45297311
AA seq 1144 aa
MNREERNLLRLKERERRNQEIQQGEEAFPSDSPLFAEPYKVISKEDKLSNRIQSMLGNYD
EMNDTNEMITDRSLPKVDRIPKSAVPPTAPDDKTGQGYFGDQRHSSSHQSSKWTPVGPAP
STSSQSQKRSSSSSQGGHSRSSNSSSQRHDRDSYSSSRKKGQHSSDHSKSRSISPGKQSA
LNSSHSRVHGNDHHSKEPPHSKSPRDPDANWDSPSRAPTFSSGQHSSQAFPPSLMSKSML
QKPTAYVRPMDGPESMEPKLSSEHYSSQSHGNTMSELKSSSKAHLTKLKIPSQPVDASAS
GDVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKDTQQTSFSSCEQKRYNPSTK
TANGHPTKSSLKEDLKLSSSEDSDGDQECEKVVQTNTPGSSEPSQNNSEGAENSRDDSSS
HSGSESSSGSDSESESSSSDSEANEPSRSASPEPEPPPSNKWQLDNWLNKGNPHKVSPAS
SVESNIPSSQGYKKESQEQGAGTGYGEPSGPKESNTSTPARESKTAQKGSENSRGRQKSP
AQSESTTQRKTIGKKQPKKTEKSTVEAPRGGLKIESVTTTEITTNLPPNRHKAATKGSRK
PNIKKEPKSSPRPATERKKYKPSKPSQKSREFVETDTSSSDSDENESLPPSSQTPKYSES
NRTPPAKPSVEEDDSFFRQRLFSPMEEKEPLSPLSEPEERYPLIVKIDLNLLSRIPGRPY
KEAEQPKVEKSAPEKHPKEIQKQTDKSSTKGKRKHKNDDESRGNDSKKPKVEEKASSHKS
SNKESSKQNTVKEKDPLPSPAQPQQQKDSKTDHIPRKRTVSQSSSLKSGSSGSTKESSSK
SSSSAKQRKTEGKSTSSAKEPKEKSANSTVAVAFIPPVDNKSQRAKLVFEDRIHSADHYL
QEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKSVQEAKSPFPMYSETVELIKY
TMKLKSSAAPDATSADKRLGVLCLRCQSLLYLRLFKLKKESALKYSKTLTEHLKNSYSNS
QAPSPGIGSKSVSMPSPVSPKLSPGNSNSYSSNVSGSSGSTSSVTIPQRIHQMAASYVQV
TSNFLFATEIWDQAEQLCKEQNDFFTELDKVMGPLIFNSSTMTELVRYTRQGLHWLRLDA
KLKH
NT seq 3435 nt   +upstreamnt  +downstreamnt
atgaaccgtgaagaacggaacttgctgcgtttgaaagaaagggaaaggcgcaatcaagaa
atccaacagggcgaagaagcctttccatctgactctcctctttttgctgagccatataaa
gtaatcagcaaggaagacaaactatcaaatcgtatacagagtatgcttggaaactatgat
gagatgaatgacacgaatgaaatgataactgaccgttctttgccaaaggtagataggatt
cccaagtcagcagttcctccaacagcaccagatgataagactggacaggggtactttgga
gatcagaggcacagcagctctcaccagagcagtaaatggactccggttggccctgcaccc
agcacttcttcccagagccagaaacgctcctcctctagttcacaaggtgggcacagtagg
agcagcaacagtagcagccagagacatgacagagattcctacagtagcagtcgtaaaaag
gggcagcatagctcagaccactccaaatctcgctccattagccctggcaagcagtctgca
ttaaactctagccactcacgtgtccatgggaatgatcatcacagcaaggagccacctcac
tcaaaatccccaagggaccctgatgctaactgggactctccatctcgggcacctacattc
tctagcgggcaacactccagccaagcatttcctccatctctgatgtctaagtcaatgctg
caaaaacctacagcttatgtacggcctatggatgggccagaatctatggagccaaagctt
tcatctgaacactacagcagccagtctcatggcaataccatgagtgaactaaaatctagc
agcaaagcacatctgaccaagctgaagataccttcacaacctgtggatgcatctgcatcc
ggtgatgtgagctgtgtggatgagattcttaaagagatgacccactcatggcctccccca
ctgactgctattcatacgccatgcaaaactgagccctcaaaattccctttcccaacaaag
gatacacagcagacttcattctccagttgcgagcaaaagagatacaacccatcgactaaa
accgctaatggtcatccaacaaaatcctcccttaaagaggacttgaaactcagcagcagt
gaagatagtgatggagatcaggagtgtgaaaaagtagtgcagacaaatacaccaggaagt
tccgaaccctcacaaaacaacagtgagggagcagagaattccagggatgactcaagcagc
catagtggctccgaaagtagttcaggatcagactctgagagtgagagcagttccagcgac
agtgaagcaaatgaaccatcacgtagtgcctccccagagcctgaaccacctccatcaaat
aaatggcagctggataactggttgaataaagggaatccacacaaagtgtctcctgcatct
tcagtagaaagcaatatcccttcgtcccaaggctacaaaaaggaaagccaggagcagggt
gcaggaactggctatggagaaccaagtgggccaaaagagtcaaacacctctacgccagct
agagaatctaagactgcacaaaagggctctgaaaacagccgtggaaggcaaaagtctcca
gctcaaagtgagagcacaacgcaacgaaaaacaattggcaaaaaacagcccaagaaaacg
gaaaaatccactgttgaggcacctcgaggaggacttaaaatagaaagtgttacaactaca
gaaataaccaccaatttgcctcctaatagacataaagcagccacaaaaggctcccgtaag
cccaacattaagaaggagccaaagtcctctcctcggcctgcaacggagaggaaaaagtac
aagccaagtaaaccatctcagaaatcaagagagtttgttgaaacagatacctcatcttca
gactctgatgaaaatgagagccttccaccttcatcccaaacccccaaatattctgaaagc
aataggactcctcctgcaaaaccctccgttgaggaggatgatagttttttccgtcagcgt
ttgttctctcctatggaagagaaggaacctctttcacccctcagtgagccagaggaaagg
tacccactcattgttaagattgacttgaacttattgtcccggatacctgggagaccctat
aaagaagcagagcaacccaaggttgagaaaagtgctccagagaagcatccaaaagaaatc
cagaaacagactgataaaagttccacaaagggaaagcggaaacacaagaatgatgatgaa
tctagaggtaatgatagcaagaaaccaaaagtagaagaaaaagcctcaagtcacaaatca
tctaacaaagaatcctccaaacagaatacagtaaaggaaaaagatccgcttccctctcct
gctcagcctcagcaacagaaagattcaaagactgaccacatacctcggaaaaggacggtt
agccagtcatcatccttaaaatctggcagcagtggtagcaccaaggagagcagcagtaaa
agtagctcctcagccaaacagaggaagacagaaggcaagagtacaagcagtgcaaaggag
cccaaggagaaatctgctaacagtacagtggctgttgcatttataccacctgtagacaac
aaatcccaacgggcaaaactggtttttgaggacagaatccattctgcagatcattacctg
caagaagcaaagaaactaaagcacaatgcagatgctttgtctgacaggttcgaaaaagca
gtctattaccttgatgctgtggtctctttcatcgagtgtgggaatgctttagaaaagagt
gttcaagaggccaaatccccatttcccatgtattcagaaactgtggaactaattaagtac
accatgaaattgaagagctctgctgcaccagatgcaacttcagctgataaaagacttggt
gttctctgtcttcgttgtcagtctcttttgtacctcagactgtttaaactgaagaaagag
agtgcactgaagtattccaagacattaaccgagcatctaaaaaattcctatagtaattct
caagcaccatctcctggaattggaagcaaatccgtgagtatgccttccccggtgtctcct
aagctgtctcctggaaattccaacagctactcctccaatgtgtccggttcctcaggcagt
acgtcttcagtgactatcccgcagcgaatacaccagatggcagccagctatgtccaagtt
acgtccaattttctgtttgcaaccgaaatctgggaccaagctgaacagctctgcaaagag
caaaatgatttttttacagagctagataaagtaatgggccctctcatctttaactcaagc
actatgaccgaactggtacgttacacacgtcagggcctgcattggttacgcctggatgcc
aaattgaaacattaa

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