Xenopus laevis (African clawed frog): 447207
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Entry
447207 CDS
T01010
Symbol
dhx9.L, dhx9
Name
(RefSeq) ATP-dependent RNA helicase A protein
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
447207 (dhx9.L)
03012 Translation factors [BR:
xla03012
]
447207 (dhx9.L)
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
447207 (dhx9.L)
5.6.2.6 RNA 3'-5' helicase
447207 (dhx9.L)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
447207 (dhx9.L)
Translation factors [BR:
xla03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
447207 (dhx9.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
AAA_19
Dicer_dimer
ResIII
AAA_22
AAA_14
nSTAND3
Motif
Other DBs
NCBI-GeneID:
447207
NCBI-ProteinID:
NP_001087383
Xenbase:
XB-GENE-967780
UniProt:
Q68FK8
LinkDB
All DBs
Position
4L:complement(95807508..95846049)
Genome browser
AA seq
1262 aa
AA seq
DB search
MADIKNFLYAWCGKKKLTPNYEIRAAGNKNRQKFMCEVRIDGFNYIGMGNSTNKKDAQTN
SARDFVNYLVRVGEMRSDEVPSLGAELGDSIDGASLKSEGFSGPTGGPLPPHLSLQAESS
GAAPMRSNTGFNPPAYGGGAQWERGANLKDYYAKREEQEAQATLESEEVDLNAGLHGNWT
LENAKARLNQFFQKEKTQGEYKYSQVGPDHNRSFIAEMTLYVKQLGRKIIAREHGSNKKL
AAQSCALSIVRQLYHLSVIEPYSGLTKKKEGESVEPYQVNLNPDIVKQLQSTIQELGIEL
PYPPEDPSQPVSLNLGKLVHFEPSQKQSHSGVVPWSPPQENWNPWTSSNIDEGPLAFATQ
EQISLELKNEHMYHIQDPNIKQVLIDRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKT
TQVPQYILDEYIRNDRAAQCNIVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESV
LPRPHASMLFCTVGVLLRKLESGIRGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEIR
VILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYYLEDCIQMTQFIPPPRDKKKKDKDE
EGGDDEETNCNLVCGDDYGPETRRSMSQLSEKETPLELIEALLKYIETLNVPGAVLVFLP
GWNLIYAMQKHLEMNPHFGSHSYCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAET
SITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCS
KARFDKLETHLTPEIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRE
LDALDSNDELTPLGRILAKLPIEPRLGKMMIIGCIFYVGDALCTISAATCFPEPFISEGR
RLGYVHRNFAGNRFSDHVALLSVFQAWDDARMGGEDAETRFCEHKRLNMATLRMTWEAKV
QLKDILVNAGFPEECLMNQVFNNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGR
NALIHKSSVNCPFSNQDLKYPSPFFVFSEKIRTRAISAKGMTMVSPLQLLLFASKKVMSD
GEFIHLDDWIKLSMAHEESACITALRAALEALVVEVTKEPEILSQLDPVNEKMLNMIRVI
SKPSTAGISLVMGNSRFGDGPRPPKMARFDSGFQGNRGRGYHGGYNSGGGFRGAGNRGFR
GSRGGSGPRGGYQGGGFRGNYRGGNQGGGFRGGYQSQGGYQSQGGGGYGGNFQGRGGFRG
GF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggctgacatcaagaacttcttatatgcctggtgtggcaagaagaaactaaccccaaac
tatgagatccgtgcagcaggaaacaagaatcgtcaaaagttcatgtgtgaggtccgaatt
gatggcttcaactacattggtatgggtaactccaccaacaaaaaagatgctcagacaaac
tctgcccgggattttgttaactacctggttcgagttggggaaatgagaagtgatgaagtg
ccatcacttggggctgaactaggagactccatagatggagcatcccttaaatctgaagga
ttttctggtcccactggggggccattgcctcctcacctgagcctacaggctgaatccagt
ggtgctgcacctatgcgaagtaatacaggctttaaccctcctgcatatggtggaggtgcc
cagtgggaacgtggcgctaacttgaaagattattatgctaagagggaggaacaggaggct
caggctactctagagtcagaagaagtcgatttgaatgctggtttgcatggaaattggacc
cttgaaaatgcgaaggcacgtcttaatcagttcttccagaaagagaagacacaaggggaa
tacaagtattcacaagttggacctgaccacaacaggagcttcattgcagaaatgaccctg
tatgttaaacagcttggaagaaaaattattgcaagagaacatggctctaataagaaattg
gcagcgcaatcttgtgccctttcaattgtgcgtcagctgtatcatttgagtgtaattgaa
ccgtactctggactgacaaagaaaaaggaaggagagtctgtggaaccttatcaagtaaat
ttaaaccccgatattgtgaaacaattgcagagtactattcaggaactgggcattgagtta
ccatatcctcctgaagatcctagccaacctgtctcccttaatttgggaaaactggtacac
tttgagccttcacagaagcagagccactccggtgtggtgccatggtctcccccacaggaa
aactggaacccatggacaagcagcaacattgatgaaggacctctagcatttgctacccag
gagcagatcagcttagaattaaagaatgaacacatgtatcacatacaagaccctaacatt
aagcaggtcttgattgatagagagtctcttccagttaaaaaatttgaagaggagattatg
catgctgtgcataacagccctgttgtaatcatccgtggagcaacaggctgtggcaaaaca
acacaagtcccacaatacattctggatgaatatatccgcaatgaccgtgcagcacagtgt
aacattgtggttacacagcctagaagaatcagtgcagtatccgttgcagaacgtgtggct
tttgagagaggtgaagagattggaaaaagctgtggttacagtgtgcgttttgaatctgtg
cttccccgtcctcatgccagtatgcttttttgcactgttggagtccttttgaggaaactg
gagtctgggataagaggaattagccatgtgattgtagatgaaattcatgagcgtgatatt
aatactgattttcttctggtggtacttcgtgatgtgattcaggctttcccagaaatccgg
gttattctcatgtctgctactattgacacaagcatgttttgcgaatatttctttaactgc
ccaataattgaggtttttggccggacatttcctgtacaagaatactatctagaagactgc
atacagatgacccagttcataccacctccaagggataagaagaaaaaggataaggatgag
gagggtggagatgatgaagaaacaaactgtaaccttgtgtgtggggatgattatggtcct
gaaactcggcgttcgatgtctcaactcagtgaaaaggagactcccttggaactcattgaa
gctctgctaaaatatattgaaaccttgaatgtccctggggctgtacttgtctttttgcca
ggctggaatcttatctatgccatgcagaaacatttggagatgaacccacactttggaagc
cacagttactgcatcctacccctgcattcacagatcccccgagacgaacagcggaaagtg
tttgacccagtacctgatgggatcatcaaggttatattgtcaactaatattgcggagacc
agcattacaataaatgatgtcgtatacgtcatagactcttgcaagcagaaggtgaagcta
tttacatcacacaacaacatgacaaactatgcaactgtctgggcttcaaaaaccaatctg
gagcagcgtaaagggagagcaggacgtgtgagacctggcttttgcttccatttgtgtagc
aaagcacgctttgataaattggaaactcaccttaccccagagatattccgtactccacta
cacgaggtggctctgagcattaaacttcttcgtttgggcggcattgggcacttcttgtca
aaagctatagagcctccacccttggatgcagttatagaagcagagcataccctacgagag
ctggatgcacttgactccaatgacgagttaactccactaggaagaatattggctaaactg
cccattgaaccacggctgggaaagatgatgattattggttgcattttctatgttggagat
gcactctgcaccatttctgctgccacatgtttccctgagccttttattagtgagggccga
cggttgggatatgttcataggaactttgccggaaatcggttttctgaccatgtggcattg
ttatcagttttccaggcctgggatgatgcaaggatgggaggagaagatgcggaaactcgg
ttctgtgagcacaaacgtcttaacatggccacacttcgcatgacttgggaagcaaaagtg
cagctcaaagatattcttgtaaatgctggtttcccagaagaatgtctgatgaatcaagtt
ttcaacaacactggtccagacaataacctggatgtggtgatttctttgcttgcctttggt
gtttacccaaatgtatgctaccacaaagagaagcgtaaaattcttactacagagggccga
aatgctctgattcacaagtcatctgtcaactgtcccttcagcaaccaagacctgaagtat
ccgtccccattcttcgtcttcagtgaaaagatccgcacaagagcaatatctgctaaaggt
atgaccatggtgagtcctttgcagctgctcctattcgcctccaagaaagtcatgtcagat
ggggagtttatacacctggatgattggatcaaactttcaatggcacatgaagaatccgcc
tgtatcactgcattaagggctgcactggaggcccttgttgtggaagtcacaaaagaaccg
gaaattttgtcacagttggacccagtaaatgaaaagatgttgaacatgatccgggtgatc
tcgaaaccttccactgctggaataagccttgtgatgggaaattccagatttggagatggg
cctcgacctcctaaaatggcgcgttttgatagcggtttccaaggcaacagaggaagaggc
taccatggaggctataactcaggtggtggcttcagaggtgctggcaatcgaggatttagg
ggaagcagaggtggtagcggccctaggggtggttaccaaggtggtggctttagaggaaac
tataggggaggaaatcaaggtggcggattcagaggtggctaccaaagtcaaggaggctac
caaagtcaaggtggcggtgggtacggaggtaacttccaagggagaggaggattcagagga
ggattctaa
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integrated database retrieval system
