Xenopus laevis (African clawed frog): 496013
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Entry
496013 CDS
T01010
Symbol
rchy1.L, rchy1
Name
(RefSeq) ring finger and CHY zinc finger domain containing 1 L homeolog
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04115
p53 signaling pathway
xla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
496013 (rchy1.L)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
496013 (rchy1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
496013 (rchy1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
496013 (rchy1.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
496013 (rchy1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
496013
NCBI-ProteinID:
NP_001088749
Xenbase:
XB-GENE-956539
UniProt:
Q5PQ16
LinkDB
All DBs
Position
1L:84854770..84882779
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AA seq
248 aa
AA seq
DB search
MEVTGGCEHYSRSCQLRAPCCGKFYTCRLCHDSKESHKMDRFNVTQVQCMECKCVQKAQQ
TCEQCHMVFGDYYCNICHLFDKDKKQYHCDGCGICRIGPKEEFEHCTKCNLCLPLSLRGN
HKCIENVSRQDCPICLEDIHTSRVGARVLPCGHLLHSTCYEDMLKQGYRCPLCMRSALDM
TRYWRQLDDEVAQTPMPSEYQNMTVEILCNDCSSRSTVPFHILGMKCESCSSYNTAQEGK
TLTQTARE
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgacgggaggctgcgaacattactcccggagctgtcaactaagggcaccttgc
tgtggaaaattttatacatgccgcctgtgccatgacagcaaagagtcacacaagatggac
cgttttaatgtcacacaagttcagtgcatggaatgtaaatgtgttcaaaaggctcagcag
acatgtgagcaatgccacatggtatttggtgattattactgcaatatatgccacttattt
gataaggacaagaagcagtatcactgtgatggatgcggcatatgcaggattggtccaaaa
gaggagttcgaacattgtacaaaatgtaatttatgtttaccactgagcctcagaggaaac
cataagtgtatagaaaatgtatcaagacaagactgtccaatatgcctagaggacatacat
acctcacgtgtaggtgcacgtgtcctgccttgtggtcatcttcttcacagtacttgttat
gaggacatgttaaaacaaggatacagatgccccttgtgtatgcgttctgctctggatatg
accaggtactggcgtcagctggatgatgaagtggctcagaccccaatgccctctgaatat
cagaatatgaccgttgagatcctatgcaatgactgcagctccagatccacagtgccgttt
cacattctcggaatgaaatgtgaaagttgtagttcatataacaccgcgcaagaagggaag
acactaacgcagacagccagggaatga
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integrated database retrieval system
