Xenopus laevis (African clawed frog): 496290
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Entry
496290 CDS
T01010
Symbol
c9orf72.L, c9orf72
Name
(RefSeq) uncharacterized protein LOC496290
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
496290 (c9orf72.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
496290 (c9orf72.L)
Membrane trafficking [BR:
xla04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
496290 (c9orf72.L)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
496290
NCBI-ProteinID:
NP_001088919
Xenbase:
XB-GENE-5871710
UniProt:
A1L2I1
A0A974E0Q7
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Position
1L:complement(132406287..132426507)
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AA seq
461 aa
AA seq
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MANLCPPPSPAVAKTLISIDGYSPLLAATFAYWDNILGPRVRHIWSPKSDHVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQSE
LGFYLPLHKVCVARLTHIIRKGRIWMHKGQSITHMLTGEVIPIMELLSSIKSHGVPEEID
ITSTVLNDDDIGDSCHGGFLSNAISSHMQTCGCSVVVGSSAEKVNKMVRTLCLFLSPTER
KCSRLCRSESSFQYESGLFVQGLLKDATGSFVLPFRQVMYAPYPTTHIDVDIFTVKQMPP
CHEHTYNQRRYMRAELGALWKATSDEEIGMDSVIHSDETFTPNLNIFQDILHRDTFVKNF
LEQVFQLKPNLSLRSTFLAQFLLVLHRKALTLIKYIEDDTQKGKKPFKSLRSLKTDLDLA
AEGDLYIIMALAEKIKPGLHSFIFGRPFHTSMQERDVLMTF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctgtgccctcccccatctcctgcagtcgctaaaacattaattagtattgat
ggctactctcctctcttggctgctacttttgcatactgggacaatattctgggaccaaga
gtgaggcatatatggtccccaaagtctgatcatgtgttactcagtgatggggagattacc
ttcctcgccaaccatacgctaaatggcgagattttacgtaacgctgaaagtggtgccatt
gatgtcaagttctttgtgctgtcggagaaaggagttataattgtatcgcttatctttgat
gggaactggaatggtgatagaagcacgtatggactatccataatcttaccgcagtctgag
ctgggattttaccttcctctgcacaaggtctgcgtggctcgtctcacacacatcatcaga
aaaggacggatatggatgcacaaaggccagagtataactcatatgttgactggagaagtt
atccccataatggaactactttcttcaataaagtcgcatggtgtcccagaagagattgat
atcacttcaactgtacttaatgatgatgacattggcgacagttgtcatggtggtttcctc
agcaatgctatcagttcacacatgcagacctgtggctgctctgtggtggtaggcagcagt
gcagagaaagtaaacaagatggtgaggacactgtgtctctttctgtctccaacagaaagg
aaatgttccagattatgtcgctctgaatcttctttccagtatgaatctggcctctttgtg
caaggactgctaaaggatgcaacaggaagttttgtgcttccattccgccaggttatgtat
gcgccttatcccaccactcacattgatgtggatatattcaccgtgaagcaaatgcctcca
tgtcacgaacacacttataatcaaaggcgctatatgagagcagagctgggtgctttgtgg
aaagctacttcagatgaggagattggaatggattcagtcattcacagtgatgagactttc
acacctaatctaaatatatttcaagatatcctgcacagagacacatttgtgaaaaacttt
ttagagcaggtcttccaattgaaaccaaacttatccttgcgaagcacatttctggcacag
tttttgctcgtgcttcacagaaaggctctaaccttgatcaaatacattgaggatgacaca
caaaaaggcaagaaaccattcaaatctctgcgtagcctgaaaacagacctggacctagca
gcagagggcgatctttacataatcatggccttggctgaaaagattaagccagggcttcat
tcgttcatttttggcaggccgtttcacacaagcatgcaagagagagatgtactgatgaca
ttttaa
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