Xenopus laevis (African clawed frog): 779026 Help Entry 779026            CDS       T01010                                  Symbol thbs1.S Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism xla  Xenopus laevis (African clawed frog) Pathway xla04115   p53 signaling pathway xla04145   Phagosome xla04148   Efferocytosis xla04350   TGF-beta signaling pathway xla04510   Focal adhesion xla04512   ECM-receptor interaction xla04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:xla00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     779026 (thbs1.S)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     779026 (thbs1.S)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     779026 (thbs1.S)    04148 Efferocytosis     779026 (thbs1.S)   09143 Cell growth and death    04115 p53 signaling pathway     779026 (thbs1.S)   09144 Cellular community - eukaryotes    04510 Focal adhesion     779026 (thbs1.S)   09142 Cell motility    04820 Cytoskeleton in muscle cells     779026 (thbs1.S)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:xla04131]     779026 (thbs1.S)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:xla00536]     779026 (thbs1.S) Membrane trafficking [BR:xla04131]  Endocytosis   Phagocytosis    Opsonins     779026 (thbs1.S) Glycosaminoglycan binding proteins [BR:xla00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    779026 (thbs1.S) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 cEGF TSP1_ADAMTS TSP1_CFP_C Laminin_G_3 EGF TSP1_CCN Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  779026 NCBI-ProteinID:  XP_041430341 Xenbase:  XB-GENE-6253120 UniProt:  A0A8J1LMA6 LinkDB All DBs Position 8S:92512133..92529357 Genome browser AA seq 1176 aa AA seqDB search MGMMKGIFLLLMLVMPQTHQAAESGNDDNSVFDLFELTGYNRKAGSRKPQGLHLVKGPDP SSPAYRIEDADLIPPLPEDKFQDLLDAIRADRGFILLATLRQAKKSRGALLSVERKDGGG HIFSLISNGRARTLDLSLSGERKQQVVSVEDAVLATGNWTNITLFVQEDRAQLYVGCNKM ENAELDVPIQKIFTENLASTAHLRVAKGGVKDNFQGVLQNVRFVFGTTLEAILRNKGCLS MTNSVITLDNPVNGSSPAIRTNYIGHKTKDLQAVCGFSCDDLSKLFAEMKGLRTLVTTLK DQVTKETEKNELIAQIVTRTPGVCLHNGVLHKNRDEWTVDSCTECTCQNSATICRKVSCP LMPCTNATIPDGECCPRCWPSDSADDDWSPWSDWTPCSVTCGHGIQQRGRSCDSLNNPCE GSSVQTRSCQIQDCDKRFKQDGGWSHWSPWSSCSVTCGSGQITRIRLCNSPVPQLNGKQC EGEGRENKPCQKDPCPINGQWGPWSLWDTCTVTCGGGMQKRERLCNNPKPQYEGKDCIGE PTDSQICNKQDCPIDGCLSNPCFAGVKCTSFIDGSWKCGSCPPGYRGNGITCKDIDECKE VPDACFTLNGVHRCENTEPGYNCLPCPPRFTGTQPFGKGIEEAKANKQVCKPRNPCADGT HDCHKNARCIYLGHYSDPMFRCECRPGYAGNGIICGEDTDLDGWPNENLTCVDNATYHCL KDNCPNLPNSGQEDYDKDGMGDACDKDDDNDGILDDRDNCQFVYNPAQYDYDRDDVGDRC DNCPYNHNPDQADTDRNGEGDACSVDIDGDGILNERDNCAYVYNVDQKDTDKDGVGDQCD NCPLEHNPEQTDSDSDLIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDAC DHDDDNDGVPDDKDNCRLVPNPDQTDTNGDGRGDACQYDFDDDSIPDAEDVCPENVEIST TDFRKFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFGAVDFSGTFFI NTERDDDYAGFVFGYQSSSRFYVVMWKQITQTYWDTTPTVAQGYSGLSIKVVNSTSGPGE HLRNALWHTGNTPGQVRTLWHDPHQKGWKDFTAYRWHLTHRPKTGFIRVVMYEGKRVMAD SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3531 nt NT seq  +upstreamnt  +downstreamnt atggggatgatgaagggaattttcctactgttgatgttggtcatgcctcagacacatcaa gcagcagaatctgggaatgatgataacagtgtatttgatctgtttgagttaacgggatac aaccgcaaggctggttctcgtaagcctcaaggacttcatttagtaaaaggacctgaccct tcaagcccagcttacagaattgaagacgctgacttgatccctccactgccagaagataaa ttccaagacttgctagatgcaatacgtgccgatagggggttcattctgttggctactctg cgtcaagcaaagaagagtcgaggggcacttctgtctgtggagagaaaagacggtggtgga cacatcttcagtcttatctccaatggtcgggctagaaccctagatttaagtttaagcgga gaaaggaagcagcaggtggtgtctgtagaagatgctgtcttggctactggcaactggacg aacatcactctctttgtgcaagaagaccgcgcacaactctatgtaggatgcaacaaaatg gaaaacgctgagctagatgtgccaatacaaaaaattttcactgagaatctggcaagcaca gctcatcttcgagtagcaaagggaggagtaaaggacaactttcagggagtccttcagaac gtgcgctttgtgtttggaaccactttggaagctattctgagaaacaaaggctgtttaagc atgacaaactcagtcatcactttagacaatccagtgaatggctcaagcccagccatccga acgaattacattggccacaaaacaaaggatctgcaagctgtgtgtggcttttcctgcgat gatctgtccaagctgtttgcagaaatgaaaggcttacggacgctggtcacaactctcaaa gaccaagtcaccaaagagacggagaaaaatgaacttattgctcagatagtaacaaggacg ccaggtgtttgtctccacaatggagtcttgcacaagaacagagatgagtggaccgttgac agctgcactgaatgcacatgtcagaactcagctactatatgccgaaaggtatcttgccct ctgatgccctgcaccaatgccactattccagatggagaatgctgtcccagatgttggcca agcgactcagcggatgatgattggtctccatggtcagactggacaccttgctctgtgaca tgtggtcatggcatccagcagagaggccgttcctgtgacagcttaaataacccctgtgaa ggctcctctgtacagacacgttcttgccaaatccaggattgtgacaagagatttaagcaa gacggtggttggagccattggtcaccatggtcatcgtgctcagttacatgcggaagtggt caaatcaccagaatccgtctctgcaactctcctgttccacagctgaatgggaagcaatgc gaaggcgaaggaagggagaacaaaccatgtcagaaagacccatgcccaattaacggtcag tggggtccttggtcactgtgggacacatgcacagttacttgcggtggtggaatgcagaag cgagaacgtctgtgcaataaccccaaacctcagtatgagggtaaagattgtattggtgag cctactgactctcagatctgcaacaagcaggactgtcccatagatgggtgtctctctaac ccttgctttgctggagtcaaatgcaccagcttcatcgatggatcttggaaatgtggttcc tgcccaccagggtacagaggaaatggaatcacatgcaaagatattgatgagtgcaaagag gtgcctgatgcctgctttactctaaatggagttcatagatgtgagaacacagagccagga tataattgtcttccatgccctccacgtttcacaggaactcagccatttggtaaaggcatt gaggaagctaaagccaataagcaggtttgcaagcctcgcaacccatgcgcagatggtacc cacgactgtcacaagaacgccagatgtatctacctaggccactacagcgaccccatgttc cgctgcgagtgcagacctggttacgccggaaatggcatcatttgcggtgaagacaccgat ttagatggatggccaaacgagaacctcacgtgtgttgataatgctacttatcactgcttg aaagataactgccccaacctccccaattcaggccaggaagactacgataaggatggaatg ggagatgcctgcgataaagacgatgacaatgatggaatcctagatgacagggacaactgt cagtttgtgtacaaccctgcacaatatgactatgatcgagatgatgtaggagaccgttgt gataactgtccctacaaccacaacccagaccaggctgacacagatcgcaatggagaagga gatgcctgttctgtggacattgatggagatggaattctgaacgagagagataactgcgcc tatgtgtacaatgtagaccagaaagacacagataaggacggcgttggagaccaatgtgat aactgcccactggaacacaatccggaacagactgactctgattctgatctcattggagac aagtgtgacaacaaccaggatatagatgaggatgggcatcagaataacctagataactgc ccctatatccccaatgcaaaccaggctgatcacgataaggatggcaagggtgatgcatgt gaccatgatgatgacaatgatggtgttcctgatgataaagataactgccgattggtccct aacccagaccagacagatactaatggtgatggccgtggagatgcttgccagtatgacttt gatgatgacagcattcccgatgcagaagatgtttgcccagagaatgtggaaatcagcact acggacttccgtaaattccaaatggtgcctttggatcctaaagggacatcacagattgat cctaactgggtggtgagacatcaaggcaaagaattggtgcagactgttaactgcgatcct ggaatagcagttggttttgacgagttcggcgctgttgacttcagtggcacatttttcatc aacaccgagagagatgatgattatgctggctttgtgtttggataccagtccagcagcagg ttttacgtggttatgtggaagcaaatcacacagacatactgggacacaacccctacggta gctcagggctactctggcctctcaatcaaggttgtgaactctacctctggaccaggggag cacctacgaaatgcactgtggcacacaggaaacactcccgggcaggttcgcaccttatgg catgatcctcaccagaaaggctggaaagatttcacagcttacagatggcacctgacacac agaccaaagactggtttcattagagttgtcatgtatgaaggcaagagagttatggccgac tcaggaccaatttatgataaaacatatgctggaggaagattaggattgttcgtcttctca caagagatggtcttcttttctgatctcaaatacgagtgcagagactcataa

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