KEGG   Xenopus laevis (African clawed frog): 779084
Entry
779084            CDS       T01010                                 
Symbol
pole4.L, pole4
Name
(RefSeq) DNA-directed DNA polymerase epsilon 4
  KO
K03506  DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03030  DNA replication
xla03410  Base excision repair
xla03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    779084 (pole4.L)
   03410 Base excision repair
    779084 (pole4.L)
   03420 Nucleotide excision repair
    779084 (pole4.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xla03032]
    779084 (pole4.L)
   03400 DNA repair and recombination proteins [BR:xla03400]
    779084 (pole4.L)
Enzymes [BR:xla01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     779084 (pole4.L)
DNA replication proteins [BR:xla03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    779084 (pole4.L)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      779084 (pole4.L)
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone CENP-T_C TAF CENP-S
Other DBs
NCBI-GeneID: 779084
NCBI-ProteinID: NP_001090193
Xenbase: XB-GENE-5722012
UniProt: Q0EAE6
LinkDB
Position
3L:49086563..49091906
AA seq 116 aa
MAAEVAAPESLEGSGSQEDAGPSSPPAAHPAPCPSKQARLPLSRIKALMKADPDLSLASQ
ESVFVISKATELFIETIAKDAYLYAQQGKRKTLQRKDLDNAIDAIDEFAFLEGTLD
NT seq 351 nt   +upstreamnt  +downstreamnt
atggcggcagaggtagcagcaccggagtcgctggagggaagtggcagtcaggaagacgcg
ggtcctagcagtccccctgcagcacacccagctccgtgtccttcgaaacaagccaggctg
ccgctgtcccggataaaagctttgatgaaagcggatccggacctttcattggccagtcag
gagtccgtgtttgtcattagtaaagcgacggaattatttatagaaaccattgccaaggat
gcttacctatatgcgcagcagggaaagcgaaaaacactgcaaaggaaagatttggataat
gctatagatgccattgacgagtttgctttcctggagggtactttagactga

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