Xiphophorus maculatus (southern platyfish): 102218228
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Entry
102218228 CDS
T02923
Name
(RefSeq) slit homolog 1 protein-like
KO
K06838
slit 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xma00536
]
102218228
Glycosaminoglycan binding proteins [BR:
xma00536
]
Heparan sulfate / Heparin
Axon guidance molecules
102218228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
EGF_TEN
LRR_9
LRR_1
LRR_14
LRRNT
LRRCT
hEGF
EGF_Teneurin
EGF_DL_JAG
EGF_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
102218228
NCBI-ProteinID:
XP_023188908
Ensembl:
ENSXMAG00000014475
UniProt:
A0A3B5RCY6
LinkDB
All DBs
Position
5:6748107..6807867
Genome browser
AA seq
1555 aa
AA seq
DB search
MPARRRKDGAGSAAGLWTMLAWAVLVGPGGAEGCPAPCSCLGNTVDCHGRGIHSVPKNIP
RATERLDLNENNLTVITKTDFSGLKHLRVLHLMENKISSIERGAFDELKELERLRLNRNR
LSQLPELLFQKNEALSRLDLSENAIQAIPRRAFRGATDIKNLQLDKNHITCIEEGAFRAL
RSLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNALRCDCHLAWLSPWLRQRSALGLYT
QCSSPPALRGLNLAELRKSDFACSGHSGSAFVQPCSLASGSCPPMCSCSNNIVNCRGRGL
TAIPAHLPEAMTEIRLEQNGIKSVPPGAFTSYKKLHRIDLSNNQISEIAPDAFHGLRALN
SLVLYGNKITELPSGVFDGLVSLELLLLNANKIHCIRAAAFKDLENLALLSLYDNKIQSL
AMGTFSSLHSIQTLHLAQNPFVCDCHVKWLADFLGSNPIETSGARCASPRRLANKRIAQI
KSHKFRCSAKEQYHIPGTEDRRLSYECNSKPVCPAKCRCEANVVDCSNLRLTKFPEHLPP
STEELRLNNNDLSMLEATGAFKGLSHLKKINLSNNKILEIEDGAFEGASSVGELHLTANH
LESVRGSMFKGMEGLRMLMLRNNRISCIHNSSFTGLTNVRLLSLYDNQLTTILPGAFDTL
PNLSTLNLLANPFNCDCHLSWFGAWLRSRRIVTGNPRCQSPAFLRGIPLQDVAAPDFRCE
DGSVLEDRSCIAGPQCPSQCSCMDTVVRCSNKHLQALPRGLPRNITELYLDGNQFTSVPK
ELATFKYLQLVDLSNNKINSLSNDSFSNMSQLTTLILSYNSLRCIPPLALAGLRSLRLLS
LHGNDISELQQGIFSDLASLSHLAIGANPLYCDCRLLWLSDWVKSGYKEPGIARCAGPQG
LEGKLLLTTPADKFQCLGPVDISVQAKCTPCVSSPCQNQGTCQIHQTQQYTCACKSGFTG
KHCETPIDACVSNPCTNGGSCLRDEQTGGFSCACAFGFHGTFCEVNMDDCEDHGCDNGAT
CVDGVGNYTCLCPPNYRGLLCEEEDDVCSPGRNPCQHQSTCISSPTGPRCVCIPGWVGPD
CGIDYNECADHRCQNSAQCVDHLDGYSCDCLRGFSGEFCEVTDLQQTPCQMAKCQNGAPC
NDKLGTAICQCPPGFEGQSCEKLVSVNFVDRDSYVELQDVKNWPQSNITLQVSTAEDNGI
LLYNGDHEPIAVELHQGHVRVTYDPGNQPATAIYSSETVNDGNFHTVELVTFNQMVNLSV
DGGEPTTLDSQGRGQPLTRETPLYVGGMPEEVIPTSRGLSSQSLNTSSFHGCIRNLYINH
ELQDFTRSQMKPGVVPGCQPCRRLYCLHGICQPNSAQGPQCHCQPGWTGQHCDQPITVGL
SGGDVVTMANGINPCEGNKCVKGVCMVLDAQTYRCECEKGFRGALCNLQEEPAGSCQRLQ
CLHGRCQKTEDGESCVCEQGYTGESCDTETPCRGEPVRDYHRLQHGSVLCQTSKPFSWVD
CRGHCRAEAERGAAAVSCCAPLRVRRRRITFECDDGTSFTQDVEKPVECGCKKCV
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgaggagaagaaaggatggagccgggtcggcggcgggtctgtggacgatgctg
gcgtgggcggtcctggtgggtccaggaggcgctgaagggtgtccggctccctgcagctgc
ctggggaacacggtggactgccacggccggggaatccactctgtccccaaaaacattccc
agagcgactgagaggctcgatctgaacgagaacaacctgacggtcataaccaagacagat
ttctctggtcttaaacacctcagagttcttcacctgatggagaacaagatcagtagcatt
gaaagaggagcctttgatgagctgaaggagctggaaagactgcgtcttaacagaaatcgt
ctcagccagcttccagagctgctctttcagaagaacgaagctctgtctcgactggatttg
agtgaaaatgccatccaggccatcccaaggcgagcgttcagaggagccacagacatcaaa
aaccttcagctggataaaaaccacatcacctgtattgaggagggagcgttcagagctctg
agatccttggaagtgctcacactgaacaacaacaacatcagcagcatcccagtttccagt
ttcaaccacatgccgaaactgcgaaccttccggctccactctaacgctctgcgctgtgat
tgtcacctggcctggctgtcgccatggctacggcagcggtctgcgctgggcctctacacg
cagtgcagttcccctccggctctgcgggggctcaacctcgcagagctgcgcaagagtgac
ttcgcctgctcaggccacagcggcagcgccttcgttcagccgtgcagtttggcgtccggt
tcttgtcctccgatgtgttcctgtagcaacaacattgtgaactgcagaggaaggggcctc
actgccatacctgcccacctgccggaggccatgacagagattcgtctggagcagaatggc
atcaagtcagttcctcctggtgcgttcacttcctacaagaagctccaccgcatagacctg
agcaacaatcagatatctgagattgctcctgatgcatttcacggccttcgggcgctcaat
tcgctcgttttgtatgggaataaaatcactgagctgcccagcggagtatttgatggcttg
gtttctctggagctgctattgctgaatgcaaataaaatccactgtatacgtgccgcagca
ttcaaagacctggaaaacctggctcttctttctctgtacgacaataagatccaaagtctg
gctatgggaacctttagctcgctgcacagcatccagacactccacctggcccagaacccg
ttcgtttgtgactgtcatgtgaagtggctggcggacttcctgggttcaaaccccatcgag
accagcggggctcgctgcgccagccctcgtcggctcgccaacaagcgcatcgctcagatc
aagagccacaagttcagatgctccgccaaggagcagtaccacatcccaggcactgaagac
cgacgtctgagctatgagtgtaacagtaagcctgtatgtccggctaaatgtcgctgtgag
gccaatgtggtggactgctccaatctgcgcctcaccaagttcccagagcacctgccgccc
tccaccgaagagctgcgtcttaacaacaatgacctgtccatgctagaggccaccggcgcc
ttcaagggtctttctcatctaaagaaaattaacctgagcaacaacaagattttagagatt
gaggacggtgcgtttgagggcgcctcgtcagtgggggaacttcacctcacagccaaccac
ctggagtctgtgcgagggagcatgtttaaaggcatggagggtctgcgcatgctgatgctg
aggaacaacaggatcagctgcatccataacagcagcttcacagggctgaccaacgtcagg
ctgctctccctctacgacaaccagctcaccaccatcctgcctggagccttcgacactctg
cccaacctctccactctaaacctgctggccaaccccttcaactgcgactgccacctgtcc
tggttcggagcgtggctccggagccgccggatcgtgacggggaaccctcggtgccagagc
ccggcttttctgcgaggcattcctctgcaggacgtagcggcccctgatttccgctgcgag
gatggttctgtgctggaggacaggagctgcatagcggggccccagtgtcccagtcagtgt
tcctgtatggacacagtggttcgctgcagcaacaaacacctgcaggctctgcccagggga
ttaccacgtaacatcaccgaactgtacctggatggaaaccagttcaccagcgttcctaaa
gagttagccaccttcaagtacctgcagctagtagatctgagcaacaataaaatcaactcg
ctgtccaacgactccttctcaaatatgagccaactcacaactctgatcctcagctacaac
tcgttacgatgtatccctcctctagctctggccggcctgcgctcccttagactgctctct
ctccatggcaacgacatctctgagctgcagcagggaatcttcagtgacctggcctccctg
tctcacctagcaattggagccaaccctctgtactgtgactgccggctgctctggctgtca
gactgggtgaagagcggctataaggagccgggcatcgcgcgctgcgccggaccccagggc
ctggagggcaaactgctgctcaccacacctgctgacaagttccagtgtctgggtccagtg
gacatttctgttcaggccaaatgcactccatgcgtttcctccccttgccagaaccaggga
acctgccaaatccaccaaacccagcagtacacctgcgcctgcaagtcgggttttacgggt
aaacactgcgagactccaatcgatgcttgtgtcagcaacccctgcaccaatggaggaagc
tgcctgagagacgagcagacaggaggcttcagctgtgcgtgtgcattcggtttccatggc
acattttgcgaggtcaacatggatgactgcgaggatcacggatgtgacaatggcgccacc
tgtgtcgatggagttggcaactacacctgcttgtgtcctcctaactacagaggtctgctt
tgtgaagaggaggatgatgtttgttctccaggtagaaatccttgtcagcatcagtccacc
tgcatcagcagtcctacaggccccaggtgtgtgtgtatccctggctgggtgggaccagac
tgcggcatcgactacaacgagtgcgcagatcaccgctgtcagaactcagctcagtgcgtc
gaccatctggacggttacagctgcgactgcctgcggggattcagtggcgagttttgtgag
gtgacagatcttcagcagacaccctgccagatggccaagtgtcagaatggcgctccctgt
aacgacaagttggggaccgcaatctgtcagtgtccgcccggctttgagggccagagttgc
gagaagctggtcagcgtcaatttcgtggacagagattcttacgtcgaacttcaggatgtg
aaaaactggcctcagtccaacatcacattgcaggtgtcaactgcggaagataacggcatc
ttgctgtataatggtgatcatgagccgattgctgtagagctccatcagggtcacgtaagg
gtcacctatgaccctgggaaccaacctgccaccgctatttacagctctgagacggtaaac
gatggtaatttccacacggttgagctggtgacctttaatcagatggtgaacctgtctgtg
gatggaggagagccaacgactctggacagccaaggccgcggccagccgctgactagagag
acgcctctttacgtgggaggtatgcccgaggaggttataccgacttctcggggcctctcc
tctcagagcctcaacacgtccagtttccacggctgcatcaggaacctctacataaaccac
gagctgcaggactttacccgcagccaaatgaagccaggggttgtaccgggctgccaaccc
tgccgcagactttactgcctgcatggcatatgccaacccaacagtgcacagggcccccag
tgccactgccagccaggttggacaggtcaacactgtgaccagccaatcactgtaggcctt
agtggaggggacgtcgtcaccatggcgaatggtatcaacccatgtgagggaaacaagtgt
gtgaagggcgtctgcatggtgctggatgctcaaacctaccgctgtgaatgtgagaaggga
ttcagaggagcgctgtgcaacctccaggaggagcccgccggctcgtgccagaggctgcag
tgtcttcacggccggtgtcaaaagacggaggatggagagagctgtgtgtgcgagcaggga
tacactggagagagctgcgatacagagaccccatgtcgaggtgagccggtcagagactac
caccggctgcagcacggctccgttctctgccagacatcaaaaccgttctcctgggtcgac
tgtcggggtcactgccgggctgaagccgagcggggagccgccgccgtttcctgctgcgcc
cctctgagggtccggcggcggcggatcaccttcgaatgcgatgatgggacgtcgtttacg
caggatgtggagaagcctgtggaatgtggctgcaagaaatgtgtgtaa
DBGET
integrated database retrieval system
