Xiphophorus maculatus (southern platyfish): 102218511
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Entry
102218511 CDS
T02923
Symbol
fyco1
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1 isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102218511 (fyco1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102218511 (fyco1)
Membrane trafficking [BR:
xma04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
102218511 (fyco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
KASH_CCD
KxDL
Crescentin
ATG16
Motif
Other DBs
NCBI-GeneID:
102218511
NCBI-ProteinID:
XP_023195556
Ensembl:
ENSXMAG00000013225
LinkDB
All DBs
Position
9:17407568..17427275
Genome browser
AA seq
1510 aa
AA seq
DB search
MAVGESQLQRIIRDLHDAVAELAKEYKESGEPITDDSVNLHKFSYKLEYLLQFDQKEKTT
FLGTKKDYWDYFSDCLAKIKGANDGIRFVKSISELRTSLGKGRAFIRYSLVHQRLADTLQ
QCLMNQRVTSDWYYARSPFLKPHLSSDIINHLYELNEVQFDVASRGHDLDASWPTFARRT
VGSANSPGHMWKAPSRSSSINSLASSYSQQAPECASSPDYGQSLLNDLNDSLPACMEDNN
TVENLRLELDQSELRQRDLLDKVQQLGEESGELKGVIEELQRQLDVSLAAQEGHQGLQEE
LRALQGRDVALTRQVEALRAEEKAKETQLVLLQEKLAAAEQKNMELMAKLDGFLDEKGQQ
AASHFDSALKIHELLDKLKEAEKVKMEAEAKMVENRRQVERLEEEVQVNEMKSKENERKL
EALVTSLSEEKAKLNAKVEEQFSTLEKLQGDLALREKDANNLQRQLQNIQQSLKEKEQEL
EEVKKGAKQEIEEMQKNVDDLKESLEGKVAEITVQLTNREAELISSSETLQKLEAKNQIL
TTERDELTTSLNQHKTKINKQAAKIEDYQTQCASLQELKEKLQATVSRNEEQQNEMTEDR
AALQAELAALRASEKQLRGQVDNAKMTVDEKEKVLREENRSLDESLQRVTMAAKQSEMTS
KRLEQENQTLREELDDLKATLSRIETNLKNGRIQIEEHKKNLEASNTKLVSLQEQLSAKE
EQLENKEKEVVKLMSTLQELEAKEKENEMAKANAETTCAKQAELIERITSEKQAIETLQL
ERSSVQAKENQEVTVKLTVVEGQLEVSMKEVSRLQAKILDLKVQVQRSEEEKLKSHAQLE
VTVAQRDELRCLTEQLKSQAEELNQKHIAELLECKKKEEALAQQRDREAAAHAELAISSS
AVREELAALKAENNKLALENTEIREGLHRANTEMAELGMSICKLNAEREEASEHLAGDAA
KIEELEKEVERIEECMNDLRQENNSLREELTQKESLPRAITELQEELEKAKNQVHSIKEC
CQEEMDAVKFQMSSETMSHQAQIKAVTENLEKISAQLEEEQKNVSSLEAEVSELKAANEK
YLQLIGEKDAYITQAEATIRDNEGKIQQLSSSTASIEEAHLSMQTLCEELKQKFKATEAE
KQSQYLTMSAEIEDLNSTKINLEERLIELIKDKDALWQKSDALEFEQKLRAEERWWLVDK
EATHCLDCNDQFTWWVRRHHCRVCGRIFCYNCSNNFVLTKHSGKKERCCRDCYMQHNAVV
EKFVESEMSSSDVLPSPARAGPQPPPEPAPYKSPSSATVSDTGIKSDDGGYDIITEEEVN
GVYDSDSNSQTTGGSLEGEQDRQQPGAREIGPGEVAPDDDSVPTVQDSEINLLRSGDVTL
TVPLSVEDISQFGDGSRELFIKSSCYSTINITVTDCETTIGWMFSSEPRSISLGVVYRES
SDSDVEQAKVLIPLTRCNSHKEKIQGQVKARHPGLYTLIFDNSFSRFISKKVFYHLTMEK
PVIYDGSDGP
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcggagagagccagcttcagaggattatccgagatctacatgatgctgttgca
gagcttgcaaaggaatacaaagaaagtggggagccaatcacagatgacagcgtcaatctg
cacaaattctcctacaaattggagtatctgctacagtttgaccaaaaggagaaaacaact
tttctgggcaccaagaaggactactgggattacttcagtgactgcttggctaagatcaaa
ggagcaaatgatggcatccgttttgtcaaatccatttcagagctgaggacatctctggga
aagggacgggcatttatccgctactccctcgttcatcagcgattggctgacaccctgcag
cagtgcctgatgaaccagagagtcaccagtgactggtactatgcaaggagccccttcttg
aagcctcaccttagttctgacataattaatcatctgtacgagctcaacgaggtccagttt
gatgtggcttccagaggtcatgacctcgatgcttcttggccaacatttgcaaggaggaca
gtgggaagtgcaaattcgcctggccacatgtggaaagcaccaagtcgtagttccagtatt
aatagtctggccagttcctattcccagcaagcgcctgagtgtgcctccagcccagactat
gggcaaagtttgctgaatgatctgaatgattcactgcctgcctgcatggaggataacaac
acagttgaaaaccttcgcctggagctggatcagtcagaactaaggcagagagatctcctt
gataaggttcagcagcttggcgaggagtctggcgagttgaaaggagtgattgaagagctt
cagaggcagcttgatgtgtcgctcgctgctcaagaaggacaccagggcttacaggaagaa
ctcagagccctgcaggggcgagatgttgccctaaccagacaggtggaagcactcagggct
gaggaaaaagctaaggaaactcagcttgtcttgcttcaggaaaagctggcagctgctgag
caaaagaacatggagcttatggctaagttggatgggtttctagatgagaaaggccagcag
gctgccagtcattttgattcagctcttaagattcatgagttgttggacaaattgaaagag
gcagagaaagtgaagatggaggctgaagctaagatggtggaaaacaggaggcaggtagaa
agactggaggaagaggtacaagttaatgagatgaagtccaaggagaatgaaagaaaactt
gaggcattggttacatctttgtctgaggagaaggccaagttgaatgcaaaagtggaggaa
cagttcagtactctggaaaagctccagggggacctggcattgagagaaaaggatgcaaac
aatctacaaagacagctgcagaacatccaacaatctctaaaggagaaagagcaagagtta
gaggaggtgaagaagggggcaaagcaagaaatcgaagagatgcagaagaatgttgacgac
ttgaaagagtctttagagggaaaagtggctgaaattactgtgcagcttacaaaccgagaa
gcagaattaatctccagcagtgagacactacagaagcttgaagccaagaaccaaatactg
accacagaaagggacgaactgaccactagcctcaatcagcacaagactaagatcaacaaa
caggctgccaagatagaagactaccagacgcagtgtgccagtttacaggaattaaaagag
aagctgcaggccacagtgagtagaaacgaggagcagcaaaatgagatgacagaggacaga
gcagcactacaagctgaactagcagctctaagagcttcagagaaacagctcagaggccag
gtggacaatgccaagatgacagtggatgaaaaagagaaagtgctacgtgaggagaaccgc
agtctggatgagagtctgcagcgagtcacaatggctgctaaacaatcagagatgacttca
aagcggctggagcaagagaaccagactctgagagaggagctggatgatttgaaagcaact
cttagtcgaatagagacgaacttgaagaacggccgcattcagattgaagaacacaaaaaa
aacctagaggcttcaaacaccaaattagtcagtctgcaagaacagctcagcgcaaaagaa
gagcagctggagaataaagagaaagaagtggttaagttgatgtcaacattacaggagttg
gaggctaaggagaaggagaatgagatggccaaagccaacgcagaaacaacttgtgccaaa
caggctgaactaattgaaaggataacatcagagaaacaggcaatagagacattacagcta
gagaggagctcagtccaagcaaaggagaaccaggaagttactgtcaagctaactgtagtt
gaaggccagttggaggttagcatgaaagaggtctctagactccaggcaaagattctggac
ctgaaggtgcaagtacagagatctgaggaggaaaagctgaaatctcatgcacagctggag
gttacagtggcccaaagagacgagctgaggtgtcttactgagcagcttaaatcccaagca
gaggaactcaaccagaagcacatagccgaactcctggagtgtaaaaagaaagaggaggct
ctggctcaacagcgtgatcgagaagcagctgcccatgctgaactagccatttcttcctct
gccgtccgagaagagctggctgctctcaaagccgaaaacaacaagctggctttagagaac
acagagatccgtgagggtttgcacagagcaaacactgagatggcagagctggggatgtcc
atctgcaagctgaatgcggaaagggaagaagccagcgaacacttggcaggagatgctgct
aagatcgaagagttggagaaggaggtggagcggatcgaggagtgcatgaatgacctgcgg
caggagaacaacagtttacgagaggagctgacgcagaaggaatcccttcctagggccatt
acagagctccaggaagagctggaaaaagccaagaaccaagtgcacagcataaaggaatgc
tgccaagaggagatggatgctgtgaagtttcaaatgagctctgagaccatgagtcatcag
gctcaaataaaggctgtgactgaaaatctggagaagatttcagcacagctggaggaggaa
cagaagaacgtgtccagtttggaggcagaagtgtctgaactcaaggctgcgaatgagaaa
tacttgcagctaattggtgagaaagatgcttacatcacgcaggcggaggccaccatccgt
gacaacgaaggcaaaattcagcaactcagcagctctacggccagcattgaagaggcacat
ttgtctatgcaaactctgtgtgaggaactgaagcagaaatttaaagcaacagaggctgag
aaacaaagtcagtatctgactatgtcggcagagattgaagacctcaacagcacaaagatc
aacctggaagagaggctcattgagctaattaaggacaaagatgctctgtggcagaagtct
gatgctctggagtttgagcaaaaactacgagccgaggagcgctggtggttggttgataaa
gaggccacacactgccttgactgcaatgaccagttcacctggtgggtgcgcagacatcac
tgcagagtttgtggccgcatcttctgctacaactgcagcaacaactttgtcttgacgaaa
cacagtgggaagaaggagcgctgctgccgcgactgctacatgcagcacaatgcggtggtg
gagaagttcgtagaatcagagatgagttcttcagatgtgctgccgtccccagctagagct
ggacctcagcctccgcctgagcccgctccctacaagtcgccttccagcgcaacagtttcg
gacaccggtatcaaatctgatgatggaggctatgacatcatcacagaagaggaggtgaac
ggcgtctacgacagtgatagcaactctcagaccacaggaggttcgctggagggagagcaa
gaccgccagcaaccaggagctcgtgaaattggccccggagaggtggcccctgacgacgac
agcgtccccactgtccaggactcggagattaacctcctcagatcaggagacgtcacactc
actgtccctctcagcgtcgaggatatttcccagtttggtgacggctccagggagctcttc
atcaagtccagctgctatagtaccattaacataaccgtgacagattgtgagacaactatc
ggctggatgttctcctctgagcccaggagtatctctttaggcgtggtttaccgggagtcc
agtgacagtgatgtggagcaggcaaaggttctgattcctctgactcgctgcaattcccat
aaagagaaaattcagggacaagtgaaagcacggcaccctggcctctacacactcatcttt
gacaactccttctccaggtttatctccaagaaagttttttaccatctgaccatggagaag
cccgtaatctatgatggaagtgatggaccctga
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integrated database retrieval system
