Xiphophorus maculatus (southern platyfish): 102219009
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Entry
102219009 CDS
T02923
Symbol
rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102219009 (rnf123)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102219009 (rnf123)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102219009 (rnf123)
Multi subunit type E3
KPC complex
102219009 (rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
102219009
NCBI-ProteinID:
XP_023181250
Ensembl:
ENSXMAG00000012608
LinkDB
All DBs
Position
20:complement(5660397..5705496)
Genome browser
AA seq
1327 aa
AA seq
DB search
MSTKGGVTALPRRNYRLASDMDKPRSTGIVNEKLLSDYLHHVFPSTKPGPTVASLRKPLG
FQDLSSHLEKLLSEGETPEELKDPSAEGRLGPQPVVLDHTSGFEGLLFVDDDLLGVIGHS
NFSSIRATTCVFKGKWAYEVLISSQGLMQIGWCTLSCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGTITFCLNGQSLGTAFSSIKTGPGVAYFPAISL
SFKESVAFNFGSRPLRYPADGYLPLQDPPTADLLKAHRLLGYIKNVLSTSIDAQEEKLLE
KDSAVWRLQGDPTVLITLAHIFNVFAPLMCKVYLVEDVLMNFLLGILEGGGSVDEHPLIQ
QLLDLFWLLMEDHEVNECLKQLMMSLLRAYRFSPIIPDLGFQIHYLRLTTAILRHEKSRK
YLLNNVLFDVLRSVVFFYIKTPLRVKEAGLEELIPTTWWPTHFDKEGKDEREPKDESSDE
RLRRRAYERGCQRLKKRIEVVEDLQVQILRLLLNNKDKNTGEASRYIFLNKFRKFLQENA
SNRGHPTALCPPEYMVCFLHRLITAVRSSWDEGSRKSPSSLSSEDAYVPPQLFYNGKVDY
FDLQRLGGLLSHLKKTLKDDLATKANIVIDPAEIQAASMDDLDEDEESGATQRPFGAAAM
GGALARPSWLSSPTLGRANRFLSTAAVSLMTPRRPLSQPEKVKVRTLAVEQRTEEDIEGS
HGNDGLLLGRPQEEPDQPITDKSLLEIIDGIVMMYNLSVHQQLGKMVVVADEVHEYAVAL
KDTEEKIDRCPARRADILDELQKSQKVFAEKLNHLSRRLAWINATIYSKEKMLDVYWLLC
VCIRTIEHADNTASLFAFTPEFYLNVAMNAYSALKNYFSPANSMDELPGYEETLTQLAAI
LAKHFADPRIVGTDIKDSLMQALASYVCYPQSLRAVERIPEEQRVAMMRNLLAPYEQRPW
AQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSLLLQRHMAELLSMDK
DMAASFLNSVLNQLNWAFSEFIGMIQEIQQAAERPERNFVDTRQLKVCATCFDLSVSLLR
VLEMTVTLVPEIFLDWTRPSAELLLRRLAQLLNQVLNRVTAEKNLFDRVVNLRLPGLESV
DHYPILVAVTGILVRILVDGDKQGTSRASSVLLSDPCFQLHSIQHLLGEPAESTGPSAGP
TVAGRPAAGPPGPSAAPPAPPAAGSASERKHFSLHAYTDYISLEEKQKVEEMLEFLTEES
KQAAASTAPTSEEDLCPICYAHSISAVFRPCSHKSCKACINQHLMNNKDCFFCKATITGV
EDYSKPS
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaagggaggagtcacagctttgccgcgcaggaactacagactggcctcagac
atggacaaacccagatccacaggtattgtgaacgagaagctgctgagcgactacctgcac
cacgtgtttccctccaccaagccggggccgaccgtcgcctcgctcaggaagcctcttggt
ttccaggacttgagctcacacctggagaagcttctgtctgaaggagaaacacctgaagag
ctcaaagatccgtctgcagagggccgtctgggtcctcagcccgtggttctggaccacacc
agcggctttgagggcctcttgttcgtggacgacgacttgctgggggtgattggccacagc
aacttcagttccatcagagccaccacctgcgtttttaaagggaaatgggcctacgaggtt
ctgatctcctctcagggtctgatgcagatcggctggtgcactctgagctgtcgcttcaac
caggaggaaggggtcggggacacgccggactcgtacgcctatgatggaaaccgggtcaga
aagtggaatgtgacgaccaccaactacggaaagtcgtgggcggctggagacatcgtcagc
tgtctgatcgacctggatgaaggaaccatcaccttctgcctgaacggccagtctctgggg
acggccttcagcagcatcaagacgggtcccggcgtggcgtacttcccggccatcagcctc
tccttcaaagagtcggtggcgtttaacttcggcagccggccgctcaggtacccggctgat
ggctacctgcccctgcaggacccccccaccgcagacctgctgaaggcccacaggctgctg
ggatacatcaagaacgtcctgtccacctccatcgacgctcaggaagagaagctgctggag
aaagactccgccgtctggaggctccagggagatccgaccgttctcatcactctggctcac
atcttcaacgtcttcgctccgctcatgtgtaaggtctacctggtggaggatgtgctgatg
aacttcctgctgggaatcctggaaggaggcggttctgtggatgaacatccgctcatccag
cagctactggacctcttctggctgctgatggaggaccacgaggtgaacgagtgcctgaag
cagctcatgatgtccctgctgagggcgtaccgcttctctcccatcatcccggacctgggc
ttccagatccactatctgcgtctgaccacggccatcctgcgccacgagaagtccaggaag
tacctgctcaacaacgtcctgtttgacgttctgcgttcagtggtcttcttctacatcaag
actcctctgagagtcaaggaggcggggctggaggagctgatcccgaccacctggtggccc
acacacttcgacaaagagggaaaagatgagcgagaacccaaagacgagagttcagacgag
cgtctgaggcgccgagcgtacgagagaggctgccagcggctgaagaagaggatcgaagtg
gtggaggacctgcaggtccagatcctcaggctgctgctcaacaacaaggacaaaaatacg
ggagaagcttctcgttacattttcctcaacaagttcaggaagttcctgcaggagaacgcc
agcaaccgagggcatcccacagctctgtgtcctccagaatacatggtgtgtttcctgcac
cgcctcatcaccgccgtgcggagcagctgggacgaaggcagcaggaagagtcccagcagc
ctcagcagcgaagacgcctatgttcctcctcagctcttctacaacgggaaggtggattac
tttgacctgcagagactgggaggactcctgtcccacctgaagaagactcttaaagacgac
ctcgccactaaggccaacattgtcatcgaccctgcggagatccaggccgcgtcgatggac
gacctggacgaagacgaggagagcggagccactcagaggcctttcggagcagcggcgatg
ggcggtgcgctggcccgacccagctggttgagttctcccactctgggccgggccaaccgg
ttcctgagcacggcggccgtcagcctgatgacgccgcggcggccgctgtcccagccggag
aaggtgaaggttcggacgctggcggtggagcagcgcaccgaggaagacatcgagggtagc
cacggaaacgacggcctgttgctggggcgaccgcaggaggagcccgaccagccaatcaca
gacaagtctctgctggagatcatcgacggcatcgtgatgatgtacaacctgagcgtccat
cagcagctggggaagatggtggtggtggcagacgaggtccatgagtacgctgtggctctg
aaggacaccgaggagaagatcgatcgctgccccgccagacgcgcagacatcctggacgag
ctgcagaaaagccagaaggtttttgcagagaagctgaaccatctgagccgccggctggcc
tggatcaacgccaccatctactccaaggaaaagatgctggacgtctactggctgctgtgc
gtctgcatccggaccatcgagcacgccgacaacacggcgtcgctgttcgccttcacgccg
gagttctacctcaacgtggccatgaacgcctacagcgccctgaagaactacttcagcccc
gccaacagcatggacgagctgccaggttacgaggaaacgctgactcagctcgccgccatc
ctcgccaagcactttgcggacccacgcatcgttgggacagatatcaaagattccctgatg
caggcgctggccagctacgtctgttacccacaatccctcagggcggtggagaggatccca
gaggagcagcgagtggccatgatgaggaaccttctggctccgtatgagcagagaccctgg
gctcagaccaactggatcctggtcagactctggaggggctgcgggttcggctacaggtac
acccgcctgcctcacctgctgaagaccaaacccgaggacgccaacctgcccagcctgcag
aagccgtgcccgtcgttgctgctgcagagacacatggcggagctgctgagcatggacaaa
gacatggccgcctccttcctcaacagcgtcctgaaccagctcaactgggccttctccgag
ttcatcggcatgatccaggagatccagcaggcagcggagcgcccggagaggaactttgtg
gacacccgtcagctgaaggtgtgcgcgacctgcttcgacctttccgtcagcctgctcagg
gttctggagatgaccgtgactctggttccggagatcttcctagattggacccggccgtcg
gcggagctgctgctgaggcggctcgcccagctgctgaaccaggttctgaaccgagtcacg
gccgagaagaacctgttcgatcgggtcgttaaccttcggctgccaggtctggagagcgtg
gaccactacccgatcctggtggccgtgacgggaatcctggtccggatcctggtggacgga
gacaaacagggaacgtccagagcttcctccgtcctcctctccgacccctgcttccagctc
cactccatccagcacctcctgggggaaccggcagagtccacagggccgtccgccgggccc
acagtcgccggccggcccgcggccgggcctccgggtccctctgcggcgccgcctgctcct
ccggctgctgggagcgcctcagagaggaaacacttctccctgcatgcatacaccgactac
atcagcctggaggagaagcagaaggtggaggagatgctggagtttctcaccgaggagtcc
aagcaggctgccgcctccacagcgccgaccagcgaggaagatctctgccccatctgctac
gcccactccatctccgccgtcttcaggccctgctcacacaagtcctgcaaagcctgcatc
aatcagcatctgatgaacaacaaggattgcttcttctgcaaggccaccatcaccggggtg
gaggactacagcaagccctcctaa
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integrated database retrieval system
