Xiphophorus maculatus (southern platyfish): 102219164
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Entry
102219164 CDS
T02923
Symbol
kdm2a
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102219164 (kdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102219164 (kdm2a)
04121 Ubiquitin system [BR:
xma04121
]
102219164 (kdm2a)
03036 Chromosome and associated proteins [BR:
xma03036
]
102219164 (kdm2a)
Enzymes [BR:
xma01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
102219164 (kdm2a)
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
102219164 (kdm2a)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
102219164 (kdm2a)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102219164 (kdm2a)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
102219164 (kdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
Cupin_8
C1_1
LRR_6
LRR_8
Cupin_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
102219164
NCBI-ProteinID:
XP_023184355
Ensembl:
ENSXMAG00000009962
LinkDB
All DBs
Position
23:complement(15502951..15518376)
Genome browser
AA seq
1301 aa
AA seq
DB search
MDDPHTRYSKRLRTAPRRQYQDDGISDDEIEGKRTFDLDEKLQCERFGSDLVKHMEGKDF
TYEYIQREGLRDPIIFKTTDGLGIQMPDPDFSVSDVKLFVGSRRIVDVMDVNTQKGIEMS
MAQWRRYYETPPSEREKLYNVISLEFSHTRLENLVKRPASVDLIDWVDNMWPRHLKERQR
DSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGAKVFWLIPPTPQNLD
MYENWVLSGKQGDIFLGDKCYDCQRIELQQGNTFIIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYNIEDRTRVPAKFRYPFYYEMCWYVVERYLFCLTNISHLTPEFQKYSLGIG
LTRADVGNNDPPINGTDEVDGDVEEKPKVEEVKEGEGDEELENKVGTTRPVLTPFELEGL
WNLLGKLEELPAHKKCVPAGIRNAAALLEDMRAVLRECAGDDIKLSCTGEPIIKWPERPS
WYQPPTPPAPVIYRPRLGPSLHKSKRSTKHTSISALRRRRVRCKRCSACCRKECGDCQYC
HDMRKFGGPGRMKKSCVMRQCLMPALPNTARCAVCGEGEFDESDPSTYSLMECTACSQIV
HRQCVKEPGEGKINKDLPSCWECPKCYQGNDSDSESSSEEESEDSEGSTFMPQSKRSYQD
DVCEEGPSRGKRSRLHGRQTAPPPSQKLLLQHQQSRKRESALEHRLKKRIKMERSKLLRK
QSSLDRSPRFLSSRMLSRLHSPVSRVSQGQIRGSAWATGSSHSGILGGNGLFGQQKSSHG
LVLHPKGEPRRGHGRGVRLRGGGAGRGIRGEGRHHEPEEDSEDSSSSSSTNSSSSEEEEE
ESRLNSGRVGDKENRPQSRQGQPATEQDECGSGLGNQNGGEKDDEEEETEYDIPKGDKDD
SFIKVTLQKPPRAKQDSSAIVPKLEAVTPQTAASAAANQSKVLHRPPIRNRGPCPDRNTN
RVTPPRTRSRHTDSHSSNPDRLEASKQTRSTRPAKLSNGASSSSSSELHHLRVPLSALQE
GGGEADRESCGGGPSCEREVWVSVFRYLNRTDLCVCMAVCKNWYKWCLDKRLWARIDLSI
KRTVTPQALTGIIKRQPVTLDLSWTNISKKQLNWLIGRLPGLKDLMLSGCSWSSISALCS
TGCPLLRSLDLRNAYGVKDAQIRDLVIPPGCDNRSQLRSMQCLRLAGLDIGDPTLRLVIR
HMPHLTKLDLSHCNSLTDHSINLLTAVGSSTRNTLTELNLGGCSKLTDTCLKYLRRLSCI
SLLDLRGCKGVSRKACEAFISELSVNTLYCLSDEKLIQRIS
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcctcacacacggtacagcaaacgactgcggacggctccgcgaaggcagtac
caggatgatggaatctcagacgatgagatcgaagggaaacgaacctttgacctggatgag
aagctgcagtgtgagaggtttggcagtgatctggtcaaacacatggagggtaaagatttt
acatatgaatatatacagagagaagggctcagggaccccattatttttaagacaaccgat
gggctcggtatacaaatgccagacccagatttcagtgtgagtgatgtcaagttatttgtt
ggcagtcgacggattgtagatgttatggacgtgaatacccaaaagggaattgagatgtct
atggctcagtggcgacgctactatgagacgccgccatcggaaagagagaaactctacaat
gtgatcagcctggagttcagccacaccaggctggagaacctggtcaaacgaccagcatca
gtggatcttattgactgggtggacaacatgtggcctcgtcatctgaaggagagacagaga
gactccactaatgccattatagacatgcattatcccaaagtacagaagtactgtctcatg
agtgtgcagggctgcttcacagacttccacatcgactttggtggaacttcagtctggtac
cacattctgcgaggggcaaaggtgttttggttgattccaccaacgcctcagaacctggac
atgtatgagaattgggttttatcgggaaagcagggggacatcttcttgggagacaagtgt
tacgactgccagaggatagagctccagcagggcaacaccttcataatcccatcagggtgg
atccatgctgtgtacactccagaagatactttagtgtttggggggaactttctccacagc
tttaacatccccatgcagctcaacatctacaatattgaagaccgcacacgggtgccagca
aagttccggtacccattttactatgagatgtgctggtacgtcgtagagagatacctcttc
tgtctgaccaacatctcccacctcaccccggagttccagaaatattcgctcggcattgga
ctgactcgagcagatgttggaaataacgatccccccattaatggcaccgatgaggttgac
ggtgacgttgaagaaaagccgaaggtagaagaggtcaaggaaggggagggtgacgaagag
cttgaaaacaaagtaggaacaactcgacctgtgctgacgcctttcgaactggagggactg
tggaaccttttagggaagctggaagagctgccagctcataaaaagtgcgtccctgcagga
atcagaaatgctgcagcgctgctggaggacatgagggctgttctaagggagtgtgccggt
gacgacatcaaactatcctgcactggagagccaattatcaagtggcctgaaaggccgtca
tggtaccagccccccacacctccagcacctgttatttatcgtccccgcctgggtccgtct
ctgcacaaatctaagcggtctaccaaacacacttccatttcggcgctgcggcgcaggcgg
gtgagatgcaagcgatgctctgcctgctgcaggaaggagtgtggggactgccagtactgt
catgacatgagaaaatttggtggtcctggacgaatgaaaaagagctgcgttatgaggcaa
tgtctaatgcctgccttgccaaacacagcccgatgtgccgtttgtggagaaggagagttt
gacgaatcagatcccagcacttactctttaatggagtgcactgcctgttcgcagatcgta
catcgtcagtgtgtaaaggaacccggtgaggggaagatcaataaagacctgcccagctgc
tgggagtgtcccaaatgttaccaagggaatgactctgactcagagtcttccagtgaggag
gagagtgaggactcggagggctccacattcatgccacagtctaaacgttcgtatcaggat
gacgtttgtgaggaaggtccgagtcgagggaagcgaagccgactgcacggccgacaaacg
gcgccgcctccctcccaaaaactgctgctacagcatcaacagagtcgcaaacgagagagt
gcactggagcacagacttaagaaaaggataaaaatggagaggagcaaacttttaagaaaa
cagtcgtctttagatcgctctccccggttcctgagctccaggatgctttctcgcttgcac
tctccagtcagcagagtctctcagggccaaatccggggctccgcttgggcaactggttcg
tctcacagcggtattctgggaggtaacggtttgtttgggcagcagaagtcctcccacggc
ctggtgcttcatcccaaaggagagccccgcagggggcacggaagaggtgtgaggctgcga
ggaggaggagcgggacgtggcatcagaggtgaagggagacaccatgagccggaggaggac
agcgaggacagcagcagcagcagcagcaccaacagcagcagcagcgaggaagaggaggag
gagagcaggctgaacagcgggagggtgggggataaagagaacaggccacagtcgaggcaa
gggcagcccgccacagaacaggatgagtgtggaagtggactgggcaaccaaaacggagga
gaaaaggacgacgaagaggaggagacggagtatgacattccaaaaggggacaaagatgac
tcgtttattaaagtgacgcttcaaaagccgcccagagcaaaacaggactcctcagctatc
gtcccgaaattagaggccgtcacccctcaaactgcagcttctgcagcagccaaccagagc
aaggtcctccacagaccccccatcagaaatcgagggccttgtccggaccgaaacacaaac
cgggtgacgccgccgcgcactcggagcagacacacagactctcattcttccaatccagac
agactggaagcatcaaaacaaacgagatcaaccagaccagctaaacttagcaacggggct
tcctcctcttcatcgtctgagcttcatcatctcagagtccccctctccgccctgcaggaa
ggagggggggaagcggacagggagagctgcgggggcggtccgagctgtgagagggaggtc
tgggtctccgtctttcgctacttaaaccgaacggatctgtgtgtctgcatggcggtctgc
aagaattggtacaaatggtgtttagataaaaggctctgggcccgaattgacctgagcatc
aagcgcactgtgacccctcaggccctcacaggcatcataaagagacaacccgtcacactc
gacctctcctggacgaacatctccaaaaaacagctcaactggctcattggccgcctgcct
ggactaaaggatttgatgctgtccggttgttcctggtcgtcgatttcagctctctgctcc
actggctgtcctctccttcgctctctggacctgcgaaacgcgtacggcgtcaaagacgca
cagatcagggatttagtcatacctccaggctgtgacaatcgcagccagctgaggagcatg
cagtgcttgcgactcgcaggtctggacatcggcgaccccactctgcggctggtgatccgc
cacatgccccatttaactaaactggatctgtcccactgcaacagcctcaccgaccactcc
atcaacctgctgaccgcggtcggctcgtccaccaggaacacgctgaccgagctcaaccta
ggaggctgcagcaaactgacagacacatgtttgaaatatctgcgccgcctgtcatgcatc
tctctgctggacctgcgaggctgcaaaggagtctccagaaaggcctgtgaggcctttatc
tctgagctgtcagtcaacacactctactgcctatcagatgagaaactgatccagcggata
tcctag
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integrated database retrieval system
