Xiphophorus maculatus (southern platyfish): 102219387
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Entry
102219387 CDS
T02923
Symbol
hps6
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102219387 (hps6)
Membrane trafficking [BR:
xma04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
102219387 (hps6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
102219387
NCBI-ProteinID:
XP_005800502
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Position
22:complement(13386920..13392279)
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AA seq
893 aa
AA seq
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MSRFVLEELSDFRDYAGSQKLSDLLTFSKDEPSRIKLSDVRVSPDGRHVHVLLRQPKVGL
MTFDKHERPQLALNPKKLDVWFKGGVSIVDVFYLDLLHNKGKGTGVVAVVVYENGKAEFW
KFLDYKTGWYLLQTSDLCNSPRARVLSVCVCSSLLVWCEERPASENSSALSSTRNKLRYC
ICRRDCEVEDGAVNLGGLKIILHNNPKFTVISSGDYVHLLPDLKAKLQLCISKFFLTWSP
HHDSFTISTTCKNTPIKKLSAKESDFRQLIADCLGYLSALEPPEICSFSPTGCGGLLLLL
NTGWLYILQEDGMLRRMYKLADNFTPQADTHTSLCFYVNIVALMVGKTLHLIEVNCGTEL
QKIALKREGLLYANQADRRTPFLLSETGLFMLTEKDSTGKTLGLSPAESNQAGAVLVEAV
FEEACKYYQQRSLSSTQLTVESLKKGGRFQAPISLASILRNYLNSGLRRTETESLQNGGG
DYIAGQDKLMCSLEGELRALVALLELKGSLVRGGVKEVEAVGGTLVEKEVVRLLSSSELD
GETLLYLNSIFSMFPGQAWSAAQAALQLHHNVEGSLSSRAAPDVWKMVLTPCPNSLPAMN
GQSKHSPSLKGDNNCKVTTSPAALPVFELLCQSVVRFQPGWLPRFLQLSQQQQGSAALGL
SLASSSWGFPSGRGGESGENNVPLYRRALWVLSSLDTDTEQRQDLEVELLLVSGRPNAIL
QALRILMVKRQWERVTQVAQQFCKQSPLLNKEIFNSLLCEVSQHRELDPYLDLLWALCPE
DYTVTTILNLVLKNISCSPPSPAPFADPPSSQLAMGQLKPLLRKVLQRETKPSQRYADIL
QSPLYPPPALPRQPTVRPSSVSDADTPSPHTETQELKSSPNTNALPADPGGFS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggtttgtcttggaagagctgtcggatttcagggactacgctggaagccagaag
ctgagtgacttactaactttttctaaagacgagcccagcaggatcaaactgtcagacgtt
cgtgtgagtccagatggacgtcacgtccatgtcctcctccgccagcctaaggtcggtctc
atgacttttgacaagcatgaaagaccccagctggctctcaacccgaagaaactggacgtg
tggttcaaagggggcgtctccatagtggatgtattctacttggatctccttcataacaaa
ggcaaggggacaggagttgttgcggtggttgtttatgagaatgggaaagccgagttttgg
aaattcctggactacaaaaccggctggtatctcctgcagacctctgatctgtgcaacagc
ccccgggccagagtgttgtcagtgtgtgtgtgctccagcctcctggtgtggtgtgaggag
cgtccagcctcagagaactcctctgccctcagctccaccaggaacaaactgagatactgc
atctgcaggagggactgtgaggtggaggatggagctgtgaacctgggaggactgaaaatc
attcttcacaataatcctaaattcaccgtcatcagctcaggcgactacgtgcatctgctg
cctgacctgaaagccaagttgcaactgtgcatctccaaattcttcctgacgtggtcccct
caccacgactccttcaccatcagcaccacgtgcaaaaatacccccataaagaagctttca
gccaaggagtccgacttcaggcagctgattgcagactgtttgggatatctgtcagctctc
gagccgcctgaaatctgcagcttttctcccacaggctgcggaggcctgctgctgctcctc
aacacgggctggctgtacatcctgcaggaggacgggatgctgcggcggatgtacaagctg
gcggacaacttcacgcctcaagcagacactcacaccagcctgtgcttttacgtgaacatc
gtggcgctaatggtcgggaaaaccctgcatctgatagaggtgaactgtggcacagagctg
caaaagattgcgttgaaaagagaggggttgttatacgcaaaccaggctgacagacgaact
ccctttctgctctcggaaactggacttttcatgcttacggagaaggactctacggggaaa
actctgggcctcagtccggctgagagtaatcaggccggagccgtcctggttgaagccgtc
ttcgaggaggcgtgcaagtactaccagcaaaggagcctcagcagcacgcagctcactgtg
gagtccttgaagaagggaggacggttccaggctcccatctctctggcctccattctcagg
aactacctcaactcaggcttgaggagaacggagacagagtcactgcaaaatggaggaggt
gactatattgcagggcaggataagttaatgtgctctctggagggggagctgagagctctg
gtggctctgctggagctgaaggggagtttagtgagggggggtgtgaaagaggtagaggca
gtgggtgggacgttggtggagaaagaagtggtgaggttgctgtcgtcctccgaactggac
ggcgaaacgttgctctacctgaattccatcttcagcatgttccccggccaggcgtggagc
gctgctcaggctgcgctgcaactgcaccacaacgtggagggctccctgtccagcagggcc
gccccagacgtgtggaaaatggtcctcactccttgcccgaactcccttcccgccatgaac
gggcagtcgaagcacagccccagcctgaaaggggataataactgtaaggtcacgacctcc
ccagctgccctgcctgtgtttgagcttctctgccagtcagttgttcgttttcagcccggc
tggctgccaaggttcctgcagctctcccagcagcagcagggctctgcggcgctgggactc
agcctggcttcgtcgtcttggggtttccccagtgggagaggcggggaaagcggggagaac
aacgttcccctctacaggcgggcactgtgggtcctgtccagcctggacacagacacagag
cagcggcaggacctggaggtggagctgctgctcgtcagcgggcggcccaacgctatcctg
caggcgctgcgtatcctgatggtgaagcgccagtgggagcgggtcacccaggtggcccag
cagttctgcaaacagagccccctgctcaacaaggagatcttcaactccctgctgtgcgag
gtgtctcagcaccgggaactggacccctacctggacctgctgtgggcactgtgccccgag
gactacaccgtcaccaccatcctcaacctggtgctcaaaaacatttcctgcagccctccg
tcccccgctccatttgcagacccccccagcagccagctggccatggggcagctgaagccg
ctgctgagaaaagttctgcagagggagacaaagcccagccagcggtacgccgacatcctc
cagtcgccattgtacccgccgccggctcttccccgccagcccaccgttcggccaagctcc
gtgtctgacgcagacactccgtctcctcacacagagacacaggaactgaaatcatctccg
aacacaaacgctctacctgcagacccaggtggattttcataa
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