Xiphophorus maculatus (southern platyfish): 102219633
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Entry
102219633 CDS
T02923
Symbol
otof
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102219633 (otof)
Membrane trafficking [BR:
xma04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102219633 (otof)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
102219633
NCBI-ProteinID:
XP_023208029
Ensembl:
ENSXMAG00000015543
LinkDB
All DBs
Position
19:25436753..25458088
Genome browser
AA seq
1791 aa
AA seq
DB search
MKRSKHRGQKEDKGGDEPAILETENMLMGGPDPDTISLASVTAVTTNVSNKRSKPDIKME
PSSGRPMDYQVSVTVIEARQLVGLNMDPMVCVEIGDEKKYTSMKESTNCPYYNEYFVFDF
HIPPDVMFDKILKVSVIHSKNLLRSGTLVGSFKMDVGTVYFQPEHQFYHKWALLSDPDDI
TAGCKGYVKCDIAVVAKGDTIKTPHKANESEDDDIEGNLLLPEGVPAERQWARYYLKIYK
AEGLPRMNTSIMANVKKAFIGENKDLVDPYVQVLFAGQKGKTSVQKSCYEPIWNEQIVFT
EMFPPLCKRMKIQIRDSDKVNDVAMGTHFLDLKKISNDGDKGFLPTLGPAWVNMYGSTRT
YTLMDEYQELNEGLGEGVSFRARLLISLGVEILDPSSPDITSSTEVQVEGVPNISETATG
KVEDFFLFGSFLEATMIDRKIGDKPISFEVTIGYYGNENDGVIQPKTKGKKGDGAEEETE
LIHNSSEEEMDDDGDLTSVSTTPPMKPVITDRNYFHLPYFERKPCIYIKSWWQDQRRRLY
NSNIIDNIANKLEDGLNDVQEIIKTEKTYPERRLRGVLEELSQGCSQFIALANKDHNQSG
RTKLDRERLKLCLSEVEAIGQQAKTMRTQVKKSTVRDKLKLAQNFHTKLRFLADEPQHSV
PDVFIWMISNGKRIAYARVPSKDILYSGIDEERGKDCGKVKTIFLRIPGKKGFGPAGWTV
QSKLEIYLWLGLNRQRKDYLSGLPNGFEENKLSKGPGMPSSPPISLTYMMKQIFQLRVHM
YQARSLFAADSTGLSDPFARVFFSTQSQVTEVLAETLCPTWDQLLVFENVELFGEAYELR
DDPPIIVIELYDQDTVSVDCLDGKADFMGRTFAKPLVKMADEHYGPPRFPPQLEYYQIYR
GNGAAGEMLAAFELLQIGPNGKADLPPIDGPTDMDRGPILPVPLGIRPVLSKYRIEVLFW
GLRDLKRVNLAQVDRPRVDIECAGKGVQSALIPNYKKNPNFSTLVKWFEVDLPENELLHP
PLNIRVVDCRAFGRYTLVGSNAVTSLRKFIYRGSDKQANNWSTTEEIIVVSMETEPAFKK
MDTVVKLDSCSEAVIKVEDDDKDEKGKKKKRKKGDEPEEEELDESMLDWWSKYFASIETL
TEALRAQEAALSDSEEKEDMDIAHGGADDAPAKAPKRGKGKKDKKRAAVDPFEKKKPKLD
ELKVYPKELESEFDNFEDWLHTFYLFRGKGGDDDDQNVTDEDRIVGKFKGSLCMYKVSDD
LPRDMSFDSNLGMFQNIPNNDPVNVLVRIYVVRATDLHPADINGKADPYIAIKLGKTEIK
DKENYISKQLNPLFGKSFDVEATFPMDSTLTVSIYDWDLVGTDDLIGETKVDLENRFYSK
HRATCGISCSYAIHGYNVWRDPMKPTHVLAKLCKDGKLDGPHYGPGGRVKVENRVFMAPT
EIEDENGLKKQTDEHLALTVLRHWDGIPKAGCKLVPEHVETRPLLHPDKPGIEQGRIEMW
VDLFPKDKTAPGPALDISPRKPKKFELRVIIWNTDEVVLEDDDIFTGEKSSDIFVRGWLK
GQQEDKQDTDVHYHSITGEGNFNWRFIYPFDYLVAEEKIVISKKESMFAWDETEYKIPPR
LNLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCTIEMVTNEAEMPLVSIFKQKRIK
GWWPFVARNEEDDEFELTGKVEAELHLLTGEEAEKSPAGDGRNEPDPLEKPNRPDVALLW
FLIPLKAAKHLVCDQYRWLTIKIVTALLLLAILGLFLYNMPGYMVKKMLGA
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagtaagcaccgtggacaaaaggaggacaaaggcggagatgagccagccatt
ttggagacggagaacatgttaatgggaggtccagatcccgacaccatctctttggcctcc
gtcacagccgtcaccaccaatgtttcaaataaaagatcaaagccagacatcaagatggag
cccagctctggacgacccatggattaccaggtcagtgtgacggtgattgaagccaggcag
ctggttggcctgaacatggatcccatggtctgtgtggagatcggagatgagaaaaagtac
acctctatgaaggagtcgaccaactgcccttactacaacgaatactttgtgtttgacttc
cacatcccgccagatgtcatgttcgacaaaatcctgaaagtgtccgtgatccactccaaa
aatcttctgcgaagtggaacgctggttggatcttttaaaatggatgttggcacagtctac
ttccagccagagcatcagttttaccacaaatgggccttgttgtctgacccggatgacatc
accgcaggctgcaaaggctacgttaaatgtgacatcgcagttgtggctaaaggagacacc
attaaaactccacacaaggccaatgagtctgaagacgatgacatagaggggaatctgctg
ctacctgagggcgttcctgcagagcgacagtgggctcgttactacctgaagatctacaaa
gcagagggactccccagaatgaacaccagcatcatggccaacgtcaaaaaggcgtttata
ggagaaaataaagacctggttgatccctacgtccaagtgctctttgcagggcagaagggc
aaaacgtcggtacagaagagctgctatgagcccatctggaacgagcagattgttttcacg
gagatgtttcctcccctctgcaagcgcatgaagatccagatccgggactcggataaagtg
aacgatgtggccatgggaacacacttcttagatctgaagaagatttccaatgatggggac
aaaggcttccttcccacactggggcccgcctgggtgaacatgtacggctccacccgcacc
tacaccctgatggacgagtaccaggagctaaacgaagggctcggcgaaggcgtgtccttc
agggcccgtctgctcatcagcctgggcgtggagatcctggacccgtcctcgcctgacatc
accagctccaccgaggtccaggtggagggagtgcccaacatctccgagactgctactggg
aaggtcgaggatttcttcctgtttgggtctttcctggaagccacaatgatagacagaaag
atcggcgacaagccaatcagctttgaggtcacaataggttactatggaaacgagaacgat
ggcgtcatccaacccaaaacgaaggggaagaagggcgacggtgctgaagaggaaaccgag
ctgatacacaactccagcgaggaggagatggacgacgacggagacctgacttcagtgtcc
accactccacccatgaaacctgtcatcactgaccgaaactatttccatctgccctatttt
gagaggaagccatgcatttacatcaaaagttggtggcaggaccagaggagacggctgtac
aactccaacatcatcgacaacattgcgaacaaactggaggatggactgaacgacgtgcag
gagatcatcaaaacagagaagacctatcctgaacgaaggctgagaggcgttctcgaggaa
ctcagccaaggatgcagtcaatttattgctctggcaaacaaggaccacaatcagtccggc
agaaccaaactggacagggagagactgaagctttgcttgtcagaagtggaggccattggt
caacaagcaaagactatgaggacccaagtgaagaagagcacagtcagggataagctcaag
ctggctcagaacttccacacaaagcttcgcttcctagccgacgagccccagcacagtgta
cctgatgttttcatctggatgataagcaacggaaagcgcatcgcttacgcccgggttcct
tccaaagacatcctgtactccggtatcgatgaggagagggggaaagactgtggcaaggtc
aaaacaattttcctgaggatccctggtaaaaaaggtttcggacctgctggctggacggtt
cagtccaagttagagatttacctgtggctgggcctgaacaggcaacgcaaagactacctg
agcggcctgcccaacgggtttgaggaaaacaagttgtccaaggggcccggcatgccttcc
tcaccgcccatcagcctcacctacatgatgaagcaaatcttccagctgagggtccatatg
taccaggctcgcagcctgtttgctgctgacagcacaggtctgtccgatcccttcgcaaga
gttttcttctcaacccaaagccaagtcacagaagtgctggctgagaccctctgccccaca
tgggaccagctgctggtgtttgagaacgtggagttgtttggagaggcctatgaactgagg
gatgatccacccattattgtcattgagctgtacgatcaggacacagtgagtgtggattgc
cttgatggtaaagctgacttcatgggcaggacgtttgctaagcctttggtcaagatggcg
gatgagcactatgggccgccgcgtttcccaccccagctggagtattatcagatctaccgt
gggaacggtgccgctggagaaatgctggcagcttttgagcttctccagattggccccaat
ggaaaagcggaccttcctcccatagacgggcctacagatatggaccgcggcccaatcctg
ccggtgcctctggggattaggccagtgctcagcaagtacaggattgaggttttgttctgg
ggcttgagggacttgaagagggtgaacctggcccaggtggatcggcctcgtgtggacatt
gagtgtgcagggaagggcgttcagtcggccctcatccccaactacaaaaagaaccccaac
ttcagcactcttgtcaagtggttcgaagtggatttgccagagaacgagctgcttcaccct
ccgctgaacatccgcgtggtggactgcagagcgtttggtcgctacactttggtcggctcc
aacgccgtcaccagcctgcgcaagttcatctacaggggatcagacaagcaggccaacaac
tggtccactacggaggaaattattgtggtaagcatggaaaccgagcctgccttcaagaag
atggacaccgtggtcaaactggactcttgctctgaagctgtgatcaaagttgaggacgac
gacaaagacgagaaagggaaaaagaagaagaggaagaagggggacgaacctgaagaggag
gaacttgatgagagcatgttggactggtggtccaaatattttgcctcgattgaaacttta
actgaggctctcagggctcaggaggcagctctctcagattcagaagaaaaggaagacatg
gacatcgctcatggtggagctgacgacgctccagcgaaagcccccaagagaggaaaagga
aagaaggacaagaaaagggcagctgtggatccgtttgaaaagaaaaagccaaagctggat
gagctgaaggtgtatccaaaggaactggaaagtgaatttgacaactttgaggactggctc
cacaccttttacctgttcagagggaagggcggtgacgacgacgaccaaaatgtgacggat
gaggacaggatcgtcggaaagttcaaaggctcgctgtgcatgtacaaagtgtcggatgat
ttgcccagagacatgagcttcgactccaacttaggaatgtttcagaacatccctaacaat
gaccccgttaacgtcctggtccgcatttatgtcgtcagggcgacagatctgcatccagcg
gacataaatgggaaagctgacccctacatcgcaatcaagctggggaaaacagagatcaaa
gacaaggagaactacatttccaaacagctgaaccctttgtttggcaaatcctttgacgtg
gaggccacgttccccatggattccactctgacggtgtcaatttatgactgggacctggtg
ggaaccgatgacctgattggagaaacaaaggtcgacctggagaatcgcttctacagcaaa
cacagagccacgtgtgggatttcatgcagttacgccatccatggttacaacgtgtggcga
gaccccatgaagcccacacatgtcctggctaagctgtgtaaggacggcaaattggacggt
ccacactacggccccggaggaagggtgaaggtggagaaccgggtcttcatggcaccgact
gagatcgaggatgaaaacggcttaaagaagcagacggacgagcaccttgctctgactgtg
ctgaggcattgggacgggattcccaaagccggctgcaaactggtcccagagcacgtagag
accagaccgctgctccatccggacaaaccgggaatcgaacaaggaagaatcgagatgtgg
gtggacctgttccccaaggacaagaccgcgcccggtcccgctcttgacatctcaccacgg
aaaccgaagaagtttgaactgagggtcatcatctggaacacagatgaggtggttttagag
gacgacgacatcttcacgggcgagaaatctagtgacatctttgtgcgaggatggctgaag
ggacagcaggaggacaagcaggacactgacgtccactaccactccatcaccggggagggg
aacttcaactggcgcttcatctaccctttcgactacctggtggccgaggagaagatagtc
atctccaagaaggagtccatgttcgcctgggatgagaccgagtacaagatcccgcctcga
cttaacctccaagtgtgggacgccgatcacttctctgccgatgattttctgggtgcgatc
gagctggacctgaaccgcttcccgcgtggcgcaaagacggccaagcagtgcaccatcgag
atggtgacaaacgaagcggagatgccgctggtctccatcttcaagcagaagaggatcaaa
ggctggtggccgtttgtcgccaggaacgaagaagacgacgagtttgaactcacgggtaag
gtggaagctgagctgcaccttctcacgggggaggaagctgagaaaagcccagctggagac
gggcgcaacgagccagatcctctggagaaacccaaccgcccagatgttgccctcctctgg
ttcctcatcccgctcaaagcagcgaagcacctggtgtgcgaccagtacaggtggctgacc
atcaagatcgtcacggcgctcctgctgctggccatcctgggccttttcctctacaacatg
cccggatacatggtgaagaaaatgctgggcgcttga
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integrated database retrieval system
