Xiphophorus maculatus (southern platyfish): 102219898
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Entry
102219898 CDS
T02923
Symbol
ptprf
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04514
Cell adhesion molecules
xma04520
Adherens junction
xma04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102219898 (ptprf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102219898 (ptprf)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
102219898 (ptprf)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xma01009
]
102219898 (ptprf)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102219898 (ptprf)
Enzymes [BR:
xma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
102219898 (ptprf)
Protein phosphatases and associated proteins [BR:
xma01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
102219898 (ptprf)
Cell adhesion molecules [BR:
xma04515
]
Immunoglobulin superfamily
Type II RPTP family
102219898 (ptprf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
Interfer-bind
fn3_2
ig
CRLF2-like_D2
Tc-R-P
PTP-SAK
Tissue_fac
V-set
DSPc
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
102219898
NCBI-ProteinID:
XP_023191414
Ensembl:
ENSXMAG00000000386
LinkDB
All DBs
Position
6:complement(21175007..21415381)
Genome browser
AA seq
1923 aa
AA seq
DB search
MVPNVHLAGPLRPRGALLLLLLLGSWVISSLADSKPSFIKTPEDQTGISGGVASFVCRST
GEPRPRITWMKKGKKVSSQRFEVIEFDDGASSVLRIQPLRTHRDEAIYECTATNSVGEIN
ANAKLTVLEENQIPPGFPTIDMGPQLKVVEKTRTATMLCAAGGNPDPEISWYKDMLPVDI
NSSNGRIKQLRSGGTPIRGALQIENSDESDQGKYECVAMNDAGTRYSAPANLYVRVRRVP
PRFSIPPNNQEVMPGGSVNLTCVAVGSPMPFVKWTMGQVELTKEEEMPLGRNVLEVTSIR
ESANYTCVAISSLGMIEATAQVTVKALPKPPTSLTVTETTATSVTLTWDSGNPEPVSYYM
IQYRAKSSDNGFQEVEGVATTRYSIGGLSPYSEYEFRVMAINNIGRGPPSDPVETRTGEQ
APSSPPLHVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYSSDMTAPLSAWQKHNTDDSS
LTTISGLTPDITYSLRVLGFTSVGDGPPSDILQVKTQQGVPAQPSSFEAEAELDTRISLT
WLWPVQDQITKYELQYWEAGSDSKKHVTFSPAGSHSVDGLKPDTMYYFSLAARSEMGLGV
YTQPIQARTAQSTPSAPPQEVHVVSLTSTSLKVSWVAPPADSRHGAIVRYTVSYQAPAGE
NTERRDVSDIGADATSYVLVDLEKWTEYEVWVRAHTDVGPGPESAPVKMRTKEDVPGAPP
KKLEVEAINSTAIRVTWKPPIQVKQHGQIRGYQVIFSRLENGEPRGQPNIMDVALPEAQW
NIEESTEHEAVIGGLLAETTYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMMISTTM
GNTALIQWQPPKEMVGELMGYQLQYKRTDEETFTSLELSKTKDHHTVTELHKGATYIFRL
SARNRAGAGEAYVKEISTPEDLPTGFPLNLKVTGLTQSSTQLTWEPPNLKERNGKITYYR
VVYKDINNHQDNSSNTTETDLTIEGLNPDTTYDIRVQAFTSKGGGPLSPSIQSRTMSNDF
PTLNFGVKAVTKTSVLLTWDLPENYKSQAPFKILYNQQSVEVEGNQKRKLITHLQPDTDY
SFVLTSRGIIAGGLQQQVSIRTAPDLIKAKPVSQTPQDGKMTINLPKVQTTTRVRWFYIV
VVPQTQSMQRWKNPDEVDLEELLRSREGPVLRRRRHVESPRAYVAAKLTHLPPTFMLGDG
QDYMGFKNKPLTNMQEFQWFVVAVLRNEGTDGAANYMTFSSSPYSDPVQIPKQLSQIGDQ
PEMLWVMGPVLAVVVIIIIVIAILLFKNKQERKRASPLPKDEHSGGVKDSLLGNSSDPVE
MRRLNYQTPGPSTHRCPNTPRMREHPPIPVIDLADHIERLKANDGLRFSQEYESIDPGQQ
FTWENSNMEVNKPKNRYANVIAYDHSRVVLTSVDAVPGSDYINANYIDGYRKQNAYIATQ
GPLPETLSDFWRMVWEQRSNTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTMLDTVE
LATYSVRTFALYKNGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPM
VVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRAQRNYMVQTEDQYIFIHESL
LEAATCGNTEVPARNLYAHIQKLTQPPPGETVTAMELEFKRLANSKAHTSRFISANLPCN
KFKNRLVNIMPFESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLSETTEDFW
RMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKV
TDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVG
RTGVFITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDH
YAT
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacgttcacctggcagggcccctccggcccagaggggcgttgctgttgctg
cttctactcggctcctgggtgatctcctctctggcagacagcaagccgagttttatcaaa
acccccgaggaccagactggcatctcgggcggggttgcatcgtttgtgtgccggtccaca
ggagagccgaggccgaggatcacctggatgaagaagggcaagaaagtcagctcccagcgc
ttcgaggtgattgaattcgatgacggcgcgagctccgtgctgcggatccagcctctgcgc
acccacagagacgaagccatttacgagtgtaccgccactaacagcgttggcgagatcaac
gccaatgccaagctcacagtgctggaagagaaccagatcccgcccggcttccccaccatt
gacatggggcctcaactgaaagtggtggaaaagacccgaaccgccacgatgctgtgcgcc
gcaggtgggaacccggacccggagatctcatggtacaaggacatgctccctgtagacatc
aacagcagcaatgggcgcatcaaacagctccgctcaggtggtacaccaattagaggagcg
ctacaaattgagaacagtgacgagtcggaccaggggaaatacgaatgtgtagccatgaac
gacgccggcactcgctactctgctcctgccaatctctacgtcagagtgcgaagagtccca
cctagattctctattccacccaacaaccaagaggtgatgccgggcggcagcgtcaacctg
acgtgcgttgcggtgggctcaccgatgcccttcgtcaaatggaccatgggtcaggtggag
ctgaccaaggaggaggagatgccactgggccgcaacgtgctggaggtcaccagcatccga
gagtcggccaactacacctgtgtggccatctcttctctggggatgatcgaagccacggcg
caggttaccgtcaaagccttaccgaaacccccgacctccctgactgtgacggagaccacc
gccaccagcgtgacgctaacgtgggactccggaaacccagaacccgtttcctactacatg
atccaataccgagccaagtcgtcggacaacggcttccaggaggtggagggtgtggcaacc
acgcgctacagcatcggtggactcagcccgtactctgagtacgagttccgcgtcatggcc
atcaacaacatcggccgcgggccgcccagcgaccccgtggagacgcgcaccggcgagcag
gcgccctcgtcgccgcccctccacgttcaggctcgcatgctgagcgccagcaccatgctg
gtccagtgggagccgccagaggagcccaacggacagataagaggctaccgggtttactac
agctccgacatgacggccccgctcagcgcctggcagaagcacaacacggacgacagcagc
ctgacaaccatctctggcctgacgcctgacatcacctacagcctcagggtgctgggcttc
acctccgtaggtgacggaccaccctctgacatcctgcaagtcaaaacacagcagggagtt
cccgcgcagccgtccagtttcgaggccgaagccgagcttgacacccggatctcgctgacg
tggctgtggcctgtgcaggaccaaatcaccaagtacgagctgcagtactgggaggccggc
tcagacagcaagaaacacgtgacgttcagcccggcgggctcccactctgtggatggttta
aagcctgacaccatgtactatttctccttggcagcccgctctgaaatgggtttgggtgtc
tacacccagcccatccaagcccgcactgctcagtccactccctccgctccacctcaggaa
gttcacgtggtcagcctgacctccacaagcctcaaggtgagttgggtggcgccgcctgcc
gacagccgccacggtgccatcgtgcgctacacagtcagctaccaggctccggcgggagag
aacacggagcggcgcgatgtgtccgacatcggtgcagacgccaccagctatgtgctggta
gacctggagaagtggactgagtatgaggtgtgggtgagggcgcacactgatgtgggccca
ggccccgaaagtgccccggtcaagatgagaaccaaggaggatgtgcccggagcccctccc
aagaagctggaggttgaggccataaactccaccgccatccgcgttacttggaagcctcct
atacaggtgaagcagcatggacaaatcaggggctaccaagtcatcttttcccgactagaa
aacggcgaaccacgaggccagccgaacatcatggatgttgctttgccagaggcgcagtgg
aatattgaagagtccaccgagcatgaagctgttattggtggactgctggctgaaaccacc
tactccgtcactgtggctgcttacaccaccaagggcgacggagctcggagcaaagctaag
gtcgtcaccacgactggagcagtgccaggcaaacccactatgatgatcagcaccaccatg
ggaaacacggcactcatccagtggcagccgcctaaggaaatggtgggtgagctgatgggc
taccagctgcagtacaagcgcaccgacgaagagaccttcacctcactggagctgagcaaa
actaaagaccaccacaccgtcaccgagctgcacaaaggagcaacctacatcttccggctc
agcgcccggaaccgcgccggcgctggtgaggcttatgtgaaggagatcagcacgcctgaa
gacctgcccacaggcttcccgctcaacctcaaggtgacgggtctcacccagtcgagcacg
cagctcacctgggagcctccgaacctgaaggaacggaacggcaagataacttactacagg
gtggtgtacaaagacataaacaatcaccaagacaacagcagcaacaccacggaaacagac
ttgaccatcgagggactgaacccagacaccacctatgatatccgcgttcaggctttcacc
agcaaggggggcggccctctgagccccagcatccagagcaggaccatgtcgaacgatttc
ccaacccttaactttggtgtcaaggcagtcacaaaaacctctgtgctactcacctgggac
ctgccagaaaactacaaatcccaggctccattcaagatcttgtacaaccaacagagtgtg
gaggtggagggaaaccaaaagaggaagctgatcacacatcttcagccagacaccgactac
tcgtttgtgctcacaagcaggggcatcattgccggcggtctccagcagcaggtgtccatc
cgcacggcccctgacctgattaaagccaaacccgtctcacaaacgcctcaggatggcaaa
atgaccatcaacttgccaaaagtccagacgaccacccgcgtcagatggttttacatcgtg
gtggtgccacaaacccaatcaatgcagcggtggaagaacccagacgaggtggacctggaa
gagctgctcaggtccagagaaggtccggtgctgaggcgcagacgccacgtggagtccccc
agggcatatgttgcagccaaactgactcatctgccgccaacctttatgctgggtgatggc
caggactacatgggtttcaaaaacaagcccctaactaacatgcaggagttccaatggttt
gttgttgcggtactacgaaacgaggggacggatggcgcagctaattatatgaccttttcg
tccagcccctactctgacccagtccagatcccaaagcagttgtcccaaattggggatcag
cctgagatgttgtgggtcatgggccccgtgctggcggtggtcgtcatcatcatcatcgtc
atcgccatccttctgtttaaaaacaagcaggaaagaaagcgggcgtcacctttaccgaaa
gatgagcactcaggcggcgtgaaggactcgctgctgggcaactcctccgaccccgtagag
atgagacgactcaactaccaaaccccaggtcccagcactcatcgctgccccaacactcca
agaatgagggaacacccaccaattcctgtcattgacctggctgaccacatagagagactt
aaggccaacgacggcctccgcttctcccaggagtatgagtccatcgatccgggccagcag
tttacctgggagaactccaacatggaagtgaacaagccaaagaatcgctatgcaaacgtc
atcgcttatgaccactccagagtggtcctcacctctgtggatgctgttccaggcagcgac
tacatcaacgccaactacattgacggctacaggaagcagaacgcctacatcgccactcag
gggcctctgccggagacactgagcgacttctggagaatggtgtgggagcagaggtccaac
accatcgtcatgatgaccagactggaggagaagtcgagggtgaagtgtgaccagtactgg
ccgtcacgaggaacagagacgtacgggatgatccaggtcacgatgctggacactgtggag
ctggcaacttacagcgtccgaacctttgccctctacaagaacggctccagcgagaagaga
gaggtgaggcagttccagttcatggcctggcctgaccacggcgtgcccgagtatcccaca
cccatcctggccttcctacggcgagtaaaggcctgcaatcctccagacgccgggcccatg
gtggtccactgcagtgcgggcgttggcaggaccggctgcttcatcgtgattgacgccatg
ttggagcgcatgaagcatgagaagaccgtggacatctacggccatgtgacgtgcatgcgt
gcccagaggaactacatggtccagaccgaggaccagtacatcttcatccacgaatccctc
ctggaggccgccacctgcggcaacacggaggtgccggcgcgcaacctgtacgcccacatc
cagaagctcacccagccgccgcccggggagacggtcaccgccatggagctggagttcaag
agactggccaactccaaagcccacacatcacgcttcatcagcgccaacttgccctgcaac
aagttcaagaaccggctggtcaacatcatgccttttgagtccacccgtgtctgcctgcag
cccatccgtggtgttgagggctccgactacatcaacgccagcttcattgatggctacaga
cagcagaaagcctacatcgccacacagggacccctgagtgagaccaccgaggatttctgg
aggatgctgtgggagcacaactccaccatcgtggtcatgctcaccaagctacgagaaatg
ggccgggagaagtgtcatcagtactggccagcagagcgttccgccaggtaccagtacttt
gtggtggatccaatggctgagtacaatatgcctcagtacatcctcagagagttcaaagtc
acagatgccagggatggacaatccagaacaatccgccagttccagttcaccgactggcct
gagcagggagtgccaaaaactggagagggcttcatcgatttcattggacaagtgcacaaa
actaaggagcagtttggacaagatggaccaatcactgtacactgcagtgctggggtaggc
aggaccggagtcttcatcaccctcagcatcgtgctggagcggatgaggtatgagggtgtg
gtagatctcttccagacggtgaagacgctccgcacccagcggcccgccatggtgcagact
gaggaccagtaccagctgtgctacagggcagcactggaatacctggggagctttgaccac
tatgcaacgtaa
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integrated database retrieval system
