Xiphophorus maculatus (southern platyfish): 102220033
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Entry
102220033 CDS
T02923
Symbol
hps4
Name
(RefSeq) Hermansky-Pudlak syndrome 4 protein
KO
K20194
Hermansky-Pudlak syndrome 4 protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102220033 (hps4)
Membrane trafficking [BR:
xma04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
102220033 (hps4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Intu_longin_1
Intu_longin_3
Motif
Other DBs
NCBI-GeneID:
102220033
NCBI-ProteinID:
XP_005811204
Ensembl:
ENSXMAG00000002964
UniProt:
M3ZL81
LinkDB
All DBs
Position
12:complement(27069828..27078449)
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AA seq
611 aa
AA seq
DB search
MAELKSPDTRRCRYFFLYDGSKVRGEGDPTRDGICYFYPEETPMDKQDLLCGQLAGVGRC
VSELSSSAVRILRLRRCKFAIRMKDDFFWALGCSMEVPTVSVCELLDHLIDLFCFYNGSV
RQSYQLNSKETLAAEWARYLSHVLSGPSELHYILQSVRTLDLTNVDPLLLLKAALILQAC
QRCPLVLAGCVLFRGRVVSTQMPPQLTIKVMVHESETYAKTQRSSGRSTPTSDGGPVSAT
AVFLTPSELQYLQSAPVDKISSSHSAPEKDAPPKKTRLSRTLSDIPSSESTPSRPASCQS
LQRASFSPHTSSSEDSVFSPAPSQGSSADSPNPSPLSPIRRFSYGGNAHEAEGGTPDSLH
SGGGGVSQMPSERDGSAFEESLHLSRGAASEMTDCGNAAFRDEKTPAGEGGVCCLKPRGH
KAEMRQPPSGSCSFDSLEESPLVSMALYVHRVNSLVLALLVEPCFMGDSASMEEVNHSSL
ASLNGLEAHLRAISPAAPGAAGPYLFAHYDSVQSTLTTNVSGRPGGASEYLFVRATSLLH
SHFFDTETLQEAIIRSAGTAVYGTRSVAQETYFQQHGGSMRNSGIPNQQDSAFSLPSKAR
HRLLKHGVNLL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctcaagtcgccagacacaaggaggtgccgatatttcttcctctatgacgga
tctaaggtcagaggagagggcgaccccaccagggatggcatctgctacttctaccccgag
gagactcctatggacaagcaggacctgctgtgtggtcagcttgcaggagtgggccgctgt
gtctctgagctgtcctcctccgctgtgcgcatcctgaggctgcgtcgctgcaagttcgcc
atccgcatgaaggatgacttcttctgggctcttggttgttccatggaagtccctactgtc
agtgtctgtgagctcctggatcatctcatcgacctcttctgtttctacaacggctctgtt
cgccagagctatcagctcaacagtaaggaaactctggccgctgagtgggcgcggtacctt
tcccacgttctgtccggaccgtccgagttgcactacatcttgcaaagcgtgagaacctta
gacctgacaaacgttgacccacttcttctcctcaaagctgccctcattctccaggcgtgc
cagcgctgccccctggtgttagcaggctgtgttctttttagagggagagttgtcagcaca
cagatgccgccgcagctaacaataaaggtcatggttcatgagagtgaaacctacgctaag
acacagaggtcgagtggaaggagcacgccaacatcagacggcgggccggttagcgccact
gctgtgttcctgacgccatctgagcttcagtacctgcagtctgctcctgtcgacaaaata
tccagttcccactctgctccggagaaagacgctcccccaaagaagaccaggctttccaga
acattatcggacatcccgtcctccgagtcgacaccctctcgtccggcatcctgtcagtcc
cttcagagggcgtccttcagcccgcacacatcgagctccgaagactccgtgtttagtccg
gctccgtctcagggttcttctgcggattcccccaacccgtctcctctgtcaccgatccgt
cgtttttcttatggagggaacgctcatgaagcggagggaggaacaccggacagtcttcac
agtggcggaggtggagttagccagatgcccagtgaaagagatggctcggcgttcgaggaa
tctctccatcttagcagaggcgctgccagcgagatgaccgattgcgggaacgcggcgttt
cgtgacgaaaagacgccagcgggagaaggcggagtctgctgcctgaagcccagaggtcac
aaggcagagatgaggcagcctccttctggttcctgctctttcgacagcctggaggagagt
cctctggtttccatggcgctgtacgtgcaccgggtcaacagcctggtgctggctctgctg
gtggagccttgtttcatgggcgactctgcctccatggaggaagtgaaccacagcagcttg
gcttcgctcaacggactggaggcccacctcagggccatatctccggcggccccaggtgct
gcggggccttacttattcgcccattacgactccgtccagagcactctgacaaccaacgtg
tctggccgaccagggggagcctcggagtatctctttgtccgagccacatcgcttctccac
tcgcatttctttgacactgagactctgcaggaggctattatcaggagcgctggcacagct
gtgtacggcacccgcagcgtggcgcaggagacctacttccagcagcacggcggatccatg
aggaactcgggcattcccaaccagcaggacagcgccttctcgctgcccagcaaggcccgg
cacagactcctcaaacacggggtcaacctgctgtga
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