Xiphophorus maculatus (southern platyfish): 102221191
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Entry
102221191 CDS
T02923
Name
(RefSeq) nectin-4-like isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
xma04517
IgSF CAM signaling
xma04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
102221191
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102221191
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102221191
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102221191
Cell adhesion molecules [BR:
xma04515
]
Immunoglobulin superfamily
Nectin family
102221191
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
Ig_3
I-set
Ig_2
ig
Ig_VEGFR-1-like_5th
C2-set_2
LapA_dom
Ig_PDGFR_d4
Izumo-Ig
EphA2_TM
SCY_4732_
He_PIG
stn_TNFRSF12A
Bac_export_2
CHD5
TMEM154
PhoR
Motif
Other DBs
NCBI-GeneID:
102221191
NCBI-ProteinID:
XP_005796659
UniProt:
A0A3B5R734
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All DBs
Position
6:24385758..24413898
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AA seq
583 aa
AA seq
DB search
MESKAGLLLLLLLLIAECVQGAFVEPLQPNTDLKGFTDSQTRLPCWYQLEEDQRMVQVSW
EKVFPNGTSKQIITAHFTEGIKALESSDRMRFETFNPISDSSALLIQVTKVSDAGVYRCH
IATHPQGSFDRTIKLTVWMLPISSVEPENLVEGQAFGLVSTCRAVGYPKPGLSWDTELPG
HSKNHTGEDGKAFIQYWLHPLRSMNGKKLDCLVWHPSLKEPRRIADRLVVQYPPDPIISS
SPSNWQVGLQKAELVCEGRGNPTPQNIIWTWRGGALPDGVSVDGEKLVFGRPVQLNDSGT
YECTVKNAVGSGKTEFTLVISGPPLPPLPNLLLIIVSAVAGALVLLLVIVFLVVKRRHLR
KTKKLKMELQETKEEINSLSRQASFRRLNSAGSISRIQPEDYALLRVDSRTKYSEVSLEP
PHYQGSQSTLGGRWGPTGEVPRDEYGRPVVWTEDRECLRAAEMNREKEERRKRVESFVKN
SNMSLDSGLPSSLVPLKVQQDDSNGHKEPDLCHLQEDDSSPGDDSVVESSTTEEHEEDEG
RRRHYLQGTLSKMFYESNGVLRPRENPNAILLPCQNYCNPQLI
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgaaggctggacttctgcttctgctgcttcttcttatcgcagaatgcgttcaa
ggggccttcgtggagcctctgcagcccaacaccgacctcaaggggttcactgactcccag
accagactcccctgctggtaccagctggaggaggaccagaggatggtgcaggtctcctgg
gaaaaggtgttcccaaatgggaccagcaagcaaatcatcacggcccacttcactgaaggg
attaaagcgcttgagagctctgaccggatgaggtttgagaccttcaacccgatttctgac
agctcagctctgctcatccaagtcacaaaggtgtcagacgccggcgtctaccggtgccac
atcgccacccaccctcagggaagcttcgacaggaccatcaagctcactgtgtggatgcta
cccatctcctccgtggaaccggagaacctggtggaaggccaggcgttcggccttgtctcc
acctgtcgcgccgtgggctaccccaaacccgggctgtcctgggacacggagctgcccggc
cactccaagaaccacaccggggaagatgggaaagcgttcatccagtactggctccacccg
ctgcgcagcatgaacggcaagaagctggactgcttggtgtggcatcccagcttgaaggaa
ccccgcaggatcgctgaccgcctggtggtccagtaccccccagatcccatcatctccagt
tctcccagtaactggcaggttggtttgcagaaagccgagctggtgtgcgaaggcagagga
aacccaacaccccagaacatcatctggacttggagaggaggagctttgccagatggggtg
tctgtggatggagaaaagctcgttttcggacggcccgtccagttgaatgacagtgggact
tatgagtgcacggtcaagaacgctgtgggatctggaaaaacagagtttacattggttata
tcagggccgccgcttccgccgctgccaaacctgctgctgattatcgttagcgccgtggcc
ggcgctttggttctgctgctggtcatcgtgttcctggtcgtcaaacgccgccatctgaga
aaaaccaaaaagctgaagatggagctccaggaaacaaaggaggaaattaacagtctctcg
agacaagcctccttcaggagactgaactcagccggctcaatttcacgaattcagcctgaa
gattatgccttactcagagtagacagccgcactaaatacagcgaagtgtctctggagccc
ccccactatcagggcagccagtccactctgggtgggaggtgggggcccacaggagaggta
ccacgggatgaatacggacgtcccgtcgtctggaccgaggacagagagtgcctgagagcc
gcagagatgaacagggagaaggaggagcgcaggaaacgggtggagtcgtttgtgaagaac
agcaacatgtcgctggattcaggccttccttcctcgctggttcccctgaaggtccagcag
gacgacagtaacggtcataaagagcctgacttgtgtcacctacaggaagacgactcgtcc
ccaggcgacgactcggtcgttgaatcctccacaacggaggaacacgaggaagacgaagga
agaagacggcattatcttcagggaactctcagtaaaatgttttatgaaagcaatggggtc
ctcaggcccagagagaatcccaacgccattctcctgccttgccaaaattattgcaaccca
caacttatctaa
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