Xiphophorus maculatus (southern platyfish): 102222365
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Entry
102222365 CDS
T02923
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102222365
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102222365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
HORMA
IQ
Motif
Other DBs
NCBI-GeneID:
102222365
NCBI-ProteinID:
XP_023204792
LinkDB
All DBs
Position
16:2812755..2832403
Genome browser
AA seq
1655 aa
AA seq
DB search
MVPLLPPVGTEVFRCFTPASLEKIQRKHEAEAKQQQIRKDKNIKIAKKYLPKPAGDLEDG
KPLPLFYEDQAQEFLNIPLEDMDPFYQSHKTFIVLSKGKTIYRFNAEPTCYLLSPFNSLR
IFSIRILIHSLFSFFIMATILTDCVFMTLSNPPAWSKTVEYVVFVIYTFEVIIKVLSRGF
CVGDFTYLRNPWNWLEFMVINMIYLAEFVHFGNVSALRPFRVLRILKIITVFSGLRTIFG
AVIQSVKKLRDAMLLTFFFLSVFALIGLQLFMGDLRQKCVFTLSSDSNTSGAFNISSYEN
NGSDFDFYEYINNPENHYYPPGQLDALLCGNSSDAGTCPDGYMCLKAGRNPNYGYTSYDS
FSWAFLSLFRLMTQDFWENLFHLTLRAAGKTYIIFFVVVIFLGSFYLISLILAVVVMAYA
EQNRANIVKAKQREKEYARILKELKKREEEVQCDGEKASITFQYKAECLFSLHQTVQRAT
PLEKNGSASHEEDATRDDLEDNQKPRSSRWYVFADTFLKWDCCGCWRWLKKLLHTTVMDP
FVDVAITMCIVLYTILMATEHYYMTEKLLQLIEIGNLVITGILTAEMVFKILAMDPYHYF
QEGWNIFDSIIVTMSLVELGLAVVYSVVWRPLRLIRVFKLAMSWPAFKVLIKIIRNSLRA
LGNLMLVLAIIVFIFAVFGMQLFGKSYKDCVCRIAQDCELPRWHMNDFFHAFLVIFRILC
GEWIETMWDCMQVAGKPMCLIVYMMVLVIGKLVVLNLFLALLLSSFSGDNLAVTEDEGEN
NLQIVINRISRGTARTKAWFWTLVGKKTNINSDVNDVTCEEGDKSKEVLPLTIVNSEQSV
VKVQDPKVTKISSEAKSDSEISKNKNDEDNEEDDQDEQLAQGDKSLDCSNIERFPVISIV
KEAEDTPDDCFTEKCYSCCPCLDIDTSKSIGRIWLYIRKTCITIVESKYFKSFIITVILL
SSAALAFEDIYIEQRRDIKIILEYADQVFNFVFVVEIILKLGAYGCKTFFSSAWCWLDFL
IADVSLVLLSASILGYSELGAIKSLRTLRALRPLRVLSCFEGLRVVVNELVGAIPSIFNV
LLICLVLWLIFSIMGVNLFAGKFFCCFNETSEEYFSPEEVNNKSQCLDLFEKGFSEARWK
NTKINFDSVVMGYLSLLQVSTFKGWLDIMYSAVDSREVESQPMYESNLYMYMYFVCFIIF
GSFFPFCLFITSLINFNQRKPKPIEIEPPIKWIPREPPSRPTNKFQGLVFDLVTNPFFDI
LIMVLICLYTLAMMVETDEQSPEKEEILYWVNLVFIMIFSIECCLKIIALRKHYCYDGWN
IFDLVVVILCIVGFVVADIIEKYFVSPTLFRVIRLARIGLILRLIRRAKGIRKLLFALRK
SLPAVFNLCILLFIIMFVFSIFGMSNFAYVKKDSMIDDMINFETFGNSMISMFTITTLAG
WDGLLSPILNTPPDCDPDFENPGTSVRGNCASPAAGIVFFTLYVIVSFLVVVNIHITIIL
EIFNAAAEESTNKLSEYDIDMFYKTWEKFDPQASQFIHYSELSDLYDALPYPLRIPKPNT
INLLQMDLPLVQGDRVHCLDVLLALTEEVFGESQATEELKSTVEWKFMANIASEESLRPI
VSTFRKKHEEMAATAIQRAYRRHVQQRVNKQESYQ
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggtccctctgctgccccctgttggtacggaggtgtttagatgcttcacaccagcctca
ctggagaaaattcagcgaaagcatgaagctgaagcaaagcagcagcaaatcagaaaggat
aagaacatcaagatagcaaagaagtatcttcctaaaccagcaggtgatctggaggatggg
aagcccctcccgttgttttatgaagaccaggcccaggagtttctcaacatcccattggag
gacatggaccccttctaccaatcacacaagacctttatcgttctcagtaaaggaaaaacc
atctacaggttcaacgccgaaccaacttgttacctgctgagtcccttcaactctctgagg
atcttctccatcaggatcctcatccattctttattcagttttttcatcatggcgactatc
ctgactgactgtgtgttcatgaccttgagtaaccctccagcatggagcaagacagtggaa
tatgttgtctttgtgatctacacgtttgaggtaatcatcaaagttttatccagagggttc
tgtgtgggagacttcacctacctcagaaacccgtggaactggctggagttcatggtcatc
aacatgatatacctagcagagtttgtccactttggaaatgtatcagcactgaggccattc
agagttcttcgaatcctgaaaatcatcacagtattctctggtttaaggacaatctttggg
gctgtcatccagtcagtgaagaagctgcgtgatgccatgcttctgaccttcttttttctc
agtgtctttgctctgattggtttacagctttttatgggagacctcagacaaaaatgcgtt
tttaccctgtcaagcgacagcaacacatcaggagctttcaacatcagttcctacgaaaac
aacggcagtgacttcgatttttacgagtacattaacaacccagaaaatcactactaccca
cctggtcaacttgatgccctgctgtgtggaaacagctctgatgcagggacctgtccagat
ggatacatgtgtctgaaggcagggagaaacccaaactatggatataccagctacgacagt
ttcagctgggcgtttctgtctctgttcagactcatgactcaggacttctgggaaaatctc
ttccacctgacgctgcgagctgcaggtaaaacctacatcatcttcttcgtggtcgtcatc
ttccttggttccttctacctcattagtctcatcctggcggtggttgtcatggcgtacgcc
gagcaaaacagggctaacatcgtcaaggccaaacagagagaaaaagagtatgcccgcatc
cttaaggagttaaagaagagagaagaggaggtacaatgtgatggagagaaagcttccatc
acttttcagtacaaagctgaatgtttgttttctttacatcagacggtccagagggcaacg
cccttggagaaaaacggctctgcatcacatgaggaagatgctaccagggatgacctagag
gacaaccagaagccacgttcttcacgctggtacgtctttgctgacaccttcctgaagtgg
gactgttgtggctgttggagatggttgaaaaagcttctgcatactactgtcatggatcca
tttgtggacgtcgccatcaccatgtgcattgtcctctacactatcttgatggccactgag
cactattatatgactgagaagcttctacagcttatcgaaattggaaacctggtgattaca
gggatcttaacagctgagatggttttcaaaattctggcgatggatccatatcattacttt
caggaaggctggaatatctttgatagcatcatcgtcaccatgagtctggtggagctagga
ctggctgttgtttatagtgttgtgtggcggcccctcagattgataagagtgtttaagcta
gccatgtcgtggccggctttcaaggtgttgataaagattatccgcaactctttgagagcc
ctggggaacttgatgctggttctcgccatcattgtcttcatcttcgctgtatttgggatg
cagttgtttggaaagagctacaaagactgtgtctgccgcattgcccaggactgtgagctt
cctcgctggcacatgaatgacttttttcatgccttcctcgtcatcttcaggattctgtgt
ggcgagtggattgagacaatgtgggactgtatgcaagttgcagggaagcctatgtgtctg
attgtctacatgatggtactggtgattggaaaactggtggtcctgaatctgttcctggcc
ttgctgctaagctcattcagtggggataatcttgcagttacagaagatgaaggagaaaat
aatctccagattgtgataaaccggatcagcaggggtacagcaaggactaaggcctggttc
tggactttggtgggaaagaaaacaaacataaactcagatgtaaatgatgtaacctgtgaa
gaaggtgacaagtcaaaggaagttttacctctgacaattgtgaattcagagcagtcggtg
gtaaaagtccaagaccccaaagtaaccaaaatctcctctgaagccaagtctgactctgag
atatctaaaaataaaaatgatgaagataatgaggaggatgaccaagatgaacagcttgca
caaggtgataagtctttggactgcagcaacatcgagagatttcctgtaatctcaatagta
aaagaggcagaagacactcctgatgattgtttcacagaaaagtgttacagttgctgtcca
tgcctggatatagacacatccaagagcataggaaggatctggttatatatcaggaaaact
tgcatcaccatcgtagagtccaagtactttaagtcattcatcatcaccgtgatcctgctg
agcagtgcagccctggcctttgaggacatctacattgagcagcgccgggacatcaagata
attctggaatatgcagatcaggttttcaactttgtgtttgtggtggagataattctcaag
ttgggtgcctacggatgtaaaaccttcttctccagtgcctggtgctggttggatttcctc
attgcagatgtttctctggtgttactgtcagcaagcatcctgggatactctgagctggga
gctatcaaatctctgaggactctgagagcattgagacccctaagagtcttgtcttgcttt
gagggcttgagggtggtggttaatgaattggttggagccatcccctccatcttcaacgtg
ctgctaatctgtctggtcctctggctcatctttagcatcatgggtgtgaacctgtttgca
gggaagtttttttgctgcttcaacgaaacatcagaggagtatttctctcctgaggaagtc
aacaataaatcccagtgtctcgatttgtttgagaagggcttctccgaggctcgctggaag
aacacaaagatcaactttgacagcgttgtgatgggctacctgtctctgctgcaagtgtcc
acatttaaaggctggctggacatcatgtattcagcggtggactccagagaggtggagtcc
cagccaatgtatgagagcaacctgtacatgtacatgtactttgtctgcttcatcatcttc
ggctccttctttcctttctgcctcttcatcacctcactcatcaacttcaaccagcgtaaa
ccaaagcctatagaaatagaacccccgataaaatggatccccagagagcctccttcccga
ccgacaaacaagtttcagggtctagtcttcgaccttgtgaccaatccattttttgacatt
ctcatcatggtgttgatctgcctttatacattggcgatgatggtggaaacagacgagcag
agtcctgagaaggaagaaatcctgtactgggtcaacctcgttttcatcatgatcttcagc
atagagtgctgtctcaaaattatcgctctacgaaagcactactgttatgatgggtggaac
atatttgaccttgtggtggttatactgtgtattgttggttttgttgttgctgatatcatc
gagaagtacttcgtttctcccactctcttccgtgtgatccgactggctcgcattggcctg
atccttcgtctcattcgcagagctaagggaattagaaagctgctgtttgcattaagaaag
tctcttccagctgtattcaacctatgcatcctcctcttcatcatcatgtttgtcttctcc
atctttgggatgtctaattttgcttacgtgaagaaggacagcatgattgatgacatgatt
aactttgaaacctttgggaacagtatgatctccatgtttacgatcaccacattagctgga
tgggacggtcttctctctcccatcttgaacacacctccagactgtgatccagactttgaa
aacccaggcacatctgtcaggggcaactgtgccagccctgcagcaggtattgtcttcttt
actttgtatgtcattgtgtcctttctggtggtggtcaatatacacatcaccatcatcctg
gagatatttaacgccgccgcagaggagagcaccaacaaactatctgagtatgacattgac
atgttctataaaacttgggagaagtttgacccacaagcttcgcaatttattcactacagt
gagctgtcggatctctatgatgctctaccgtatcctctcaggattcccaaacccaacacc
atcaacctgttacaaatggacctgcctttggttcaaggagacagggtccactgtctggac
gtcctgctagctctcactgaagaggtttttggtgaatctcaggcaacggaggaactaaag
tctaccgtggagtggaagttcatggccaacattgcttcagaggagagtttaagaccaatc
gtcagcacctttcgaaagaaacacgaggagatggcagcgacagcgatccagagagcctac
aggagacacgttcagcagcgagtgaacaagcaggagtcctaccagtaa
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