KEGG   Xiphophorus maculatus (southern platyfish): 102222885
Entry
102222885         CDS       T02923                                 
Symbol
actb
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03082  ATP-dependent chromatin remodeling
xma04145  Phagosome
xma04210  Apoptosis
xma04510  Focal adhesion
xma04520  Adherens junction
xma04530  Tight junction
xma04810  Regulation of actin cytoskeleton
xma04814  Motor proteins
xma04820  Cytoskeleton in muscle cells
xma05100  Bacterial invasion of epithelial cells
xma05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102222885 (actb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102222885 (actb)
  09143 Cell growth and death
   04210 Apoptosis
    102222885 (actb)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102222885 (actb)
   04520 Adherens junction
    102222885 (actb)
   04530 Tight junction
    102222885 (actb)
  09142 Cell motility
   04814 Motor proteins
    102222885 (actb)
   04820 Cytoskeleton in muscle cells
    102222885 (actb)
   04810 Regulation of actin cytoskeleton
    102222885 (actb)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102222885 (actb)
   05100 Bacterial invasion of epithelial cells
    102222885 (actb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xma03021]
    102222885 (actb)
   03019 Messenger RNA biogenesis [BR:xma03019]
    102222885 (actb)
   03036 Chromosome and associated proteins [BR:xma03036]
    102222885 (actb)
   03029 Mitochondrial biogenesis [BR:xma03029]
    102222885 (actb)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xma04812]
    102222885 (actb)
   04147 Exosome [BR:xma04147]
    102222885 (actb)
Transcription machinery [BR:xma03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     102222885 (actb)
Messenger RNA biogenesis [BR:xma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     102222885 (actb)
Chromosome and associated proteins [BR:xma03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     102222885 (actb)
    NuA4 complex
     102222885 (actb)
  Chromatin remodeling factors
   BAF complex
    102222885 (actb)
   PBAF complex
    102222885 (actb)
   GBAF(ncBAF) complex
    102222885 (actb)
   SWR1 complex
    102222885 (actb)
Mitochondrial biogenesis [BR:xma03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    102222885 (actb)
Cytoskeleton proteins [BR:xma04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     102222885 (actb)
Exosome [BR:xma04147]
 Exosomal proteins
  Proteins found in most exosomes
   102222885 (actb)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 102222885
NCBI-ProteinID: XP_005806106
Ensembl: ENSXMAG00000000982
UniProt: A0A3B5QYT5
LinkDB
Position
16:19001212..19005098
AA seq 375 aa
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagatgaaatcgccgcactggttgttgacaacggatccggtatgtgcaaagccgga
ttcgccggagacgacgcccctcgtgctgtcttcccatccatcgttggtcgcccaaggcat
cagggcgtgatggttggtatgggccagaaggacagctatgtaggtgatgaagcccagagc
aagagaggtatcctgaccctgaagtaccccatcgagcacggtattgtgaccaactgggat
gacatggagaagatctggcatcacaccttctacaacgagctgagagttgcccctgaggag
caccccgtcctgctcacagaggcccctctgaaccccaaagccaacagggagaagatgacc
cagatcatgtttgagaccttcaacacccccgccatgtacgttgccatccaggccgtgctg
tccctgtacgcttctggtcgtaccactggtatcgtcatggactccggtgatggtgtgacc
cacacagtgcccatctatgagggctacgccctgccccatgccatcttgcgtctggatttg
gccggccgcgacctcacagactacctcatgaagatcctgacagagcgtggctactccttc
accaccacagctgagagggaaatcgtgcgtgacatcaaggagaagctgtgctatgtcgcc
ctggacttcgagcaggagatgggtactgctgcctcctcttcatccctggagaagagctac
gagctccctgacggacaggtcatcaccatcggcaatgagaggttccgttgcccagaggcc
ctcttccagccttccttcctcggtatggagtcctgcggaatccatgagaccacctacaac
agcatcatgaagtgcgacgtcgacatccgtaaggacctgtacgcaaacaccgtgctgtct
ggaggtaccaccatgtaccctggcatcgctgacaggatgcagaaggagatcacagccctg
gccccatccaccatgaagatcaagatcattgccccaccagagcgtaaatactctgtctgg
atcggaggctccatcctggcctccctgtccaccttccagcagatgtggatcagcaagcag
gagtacgatgagtctggcccctccatcgtccaccgcaaatgcttctaa

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