Xiphophorus maculatus (southern platyfish): 102224849
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Entry
102224849 CDS
T02923
Symbol
tpm4
Name
(RefSeq) tropomyosin alpha-4 chain isoform X2
KO
K10375
tropomyosin 4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04260
Cardiac muscle contraction
xma04261
Adrenergic signaling in cardiomyocytes
xma04814
Motor proteins
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
102224849 (tpm4)
04820 Cytoskeleton in muscle cells
102224849 (tpm4)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
102224849 (tpm4)
04261 Adrenergic signaling in cardiomyocytes
102224849 (tpm4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102224849 (tpm4)
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
102224849 (tpm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
Laminin_I
DUF745
ATG16
Crescentin
TMF_DNA_bd
XhlA
ERM_helical
DUF3450
CENP-F_leu_zip
Fez1
SlyX
DUF16
Lebercilin
DUF1664
HR1
Motif
Other DBs
NCBI-GeneID:
102224849
NCBI-ProteinID:
XP_005806431
Ensembl:
ENSXMAG00000003376
UniProt:
A0A3B5R8D8
LinkDB
All DBs
Position
9:complement(16236482..16264098)
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AA seq
284 aa
AA seq
DB search
MEAIKKKMQMLKLDKENAIDRAEQAETDKKAAEDKCKQLEDELLDLQKKLKQTEDELDKF
SEGLKDAQEKLELSEKKAADAEGDVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGDLERAE
ERADLAECKASDLEEELKNVTNNLKSLEAQAEKYSEKEDKYEEEIKVLTDKLKEAETRAE
FAERTVAKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcaagaagaagatgcagatgctgaaactggacaaggagaatgccatcgac
cgagcagagcaggcggaaacggataagaaggcggccgaggacaaatgcaaacagctggag
gatgagctgctggacctccagaagaagctgaagcagacggaggatgaattggacaaattc
tctgagggcctcaaagatgctcaggaaaaactggaactgtctgagaagaaagctgcagat
gcagaaggtgatgtcgcagctcttaaccgtaggatccagctggtggaggaggaattggac
cgagcccaggagaggttggccacagcgctgcagaagctggaagaggcagagaaggccgca
gatgagagtgagagagggatgaaggtgatcgagaacagagcgatgaaggatgaggagaag
atggagatccaggagatgcagctgaaggaggccaaacacatcgcagaggaagctgaccgt
aaatacgaggaggtggctcgtaagctggtgatcttggaaggggatctggagagagctgag
gagagggctgatctcgctgaatgtaaagccagtgacctggaggaggagttgaaaaatgtg
accaacaacctgaaatccttagaagcccaagcggagaagtactcagaaaaagaggacaag
tatgaggaggagatcaaagttctgactgacaaactgaaggaggctgaaacccgagcagag
tttgcagagagaacagtggccaaactggaaaagtccatcgacgacctggaagacgagctg
tatgctcagaagctgaagtacaaggccattagcgaggagctggaccatgccctcaatgac
atgacatctctttag
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