Xiphophorus maculatus (southern platyfish): 102226344
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Entry
102226344 CDS
T02923
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
102226344 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xma01002
]
102226344 (mmp2)
Enzymes [BR:
xma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
102226344 (mmp2)
Peptidases and inhibitors [BR:
xma01002
]
Metallo peptidases
Family M10
102226344 (mmp2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
DUF4953
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
102226344
NCBI-ProteinID:
XP_014329568
Ensembl:
ENSXMAG00000007790
UniProt:
M4A040
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All DBs
Position
4:complement(7401545..7420740)
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AA seq
657 aa
AA seq
DB search
MGFPTISRCHRVILKVFLLQFIAFQATNARPSPIIRFPGDDTPRTDKEVALHYLNKFYGC
PQDRCNLMVLKDTLKKMQKFFSLQETGEIDAKTVEIMKKPRCGVPDVANYNFFHRRPKWQ
KKDVTYRILGYSPDLDEEVINDAFYRAFKVWSDVTPLSFTRIMDGEADIMVNFGRNEHGD
GYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEQWTLGEGQVVKVKFGNADGEFCKFPFLFM
GTEYNSCTSQGRDDGFLWCSTTYNFDEEGKYGFCPHELLFTLGGNGEGAPCKFPFSFQGE
SYDSCTTQGRDDGYRWCATTEDYDRDKSYGFCPETAMSTVGGNAEGSPCVFPFTFLGDSY
DSCTSSGRSDGKMWCATTKNYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGAL
MAPVYTFMKDFRLSHDDIQGIQELYGVPTDKPLPPTQGPVTPMDLCKDPVIFDAVAQIRG
ETFFFKDRFLFRSVNFRSKPSGPMLVATYWPDLPAKIDAAYENPVEEKTVFFSGDEMWVY
KADELERGYPKRLSSFGLPTDVQQIDAAFNFRKNRKTYLFSADKFWRYDESSKAMDPGFP
KLIAESWNGIPDDIDSAFSLNGIDYSYFFKGSHYFKLEDSSLKIVKLGEITKDWLGC
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgggctttccgacgatatctaggtgtcatcgggttattttaaaagtgtttttgcttcag
tttatcgcttttcaagcaacaaatgcccgcccatctcctataatcaggtttcccggagac
gataccccgagaacagacaaagaagttgctctgcactatctgaataagttttatggctgc
ccacaagacagatgcaaccttatggtgctcaaagacactttgaagaaaatgcagaagttc
ttctccttgcaagaaaccggagaaatagatgccaagacggtggagatcatgaaaaaacct
cgctgtggtgtcccggatgtggccaattacaacttcttccataggagacccaagtggcag
aagaaggacgttacttacagaatcctgggctactctcctgacctggacgaggaagtcata
aatgatgctttctacagagcctttaaagtgtggagtgatgtcacgccactttcttttact
cgcatcatggatggagaggctgacatcatggttaattttggccgcaatgaacatggagat
ggttatccgtttgatggcaaagatggtctcttggctcatgcctttgccccaggaccaggc
attgggggtgattcccattttgatgatgatgagcagtggaccttaggagagggccaagtg
gtgaaagtgaagtttggcaatgctgatggagagttctgcaaattccccttcctgttcatg
gggaccgagtacaacagctgtacatctcagggtcgagatgacggattcctgtggtgctcc
accacctacaactttgatgaagagggcaaatatggcttctgccctcatgagttacttttc
acccttggtggtaacggagagggcgcgccttgtaaattccccttcagctttcagggagaa
agctatgacagctgcaccacgcagggcagggatgatggataccgctggtgtgccaccact
gaggactatgaccgtgacaagtcctatgggttctgccctgaaactgcaatgtcaacagtg
ggaggaaatgcagagggaagcccctgtgtctttcctttcaccttccttggagacagctat
gactcctgcacttcttctggacgcagtgatgggaaaatgtggtgtgctaccactaagaac
tatgacgatgaccggaaatggggtttctgtcctgaccaaggctatagcttgttcctggtg
gcggcccatgagtttggtcacgcccttggtttggagcattctcaggacccaggagctctg
atggctcctgtctatacttttatgaaagacttcagactttctcacgatgacatccaaggc
atccaagagctctatggtgtgccaaccgacaagcctttgcctccaacccagggtcctgtc
actccaatggacctttgtaaagatccagttatctttgatgctgttgcacaaatcagagga
gagacatttttcttcaaagacaggttcctgttcaggtcagtgaacttcaggagcaaaccc
agtggccctatgctagtggccacctactggcctgacctccctgcgaagatagacgctgcc
tatgaaaatccagtggaggagaaaacagtcttcttctcaggtgatgagatgtgggtttac
aaagccgatgagctggaaagaggttacccgaagaggctctccagctttggcctccctaca
gatgtgcagcaaatcgatgctgccttcaacttcaggaagaacaggaagacttacttattt
tctgcagacaaattctggagatacgatgaaagtagtaaggcaatggaccctggcttcccc
aagcttattgctgaatcctggaacggcattcctgatgacattgactctgctttcagtctg
aacggcattgattacagctacttctttaaaggaagtcactatttcaaacttgaagacagc
agtttgaagatcgtcaagttgggagaaatcacaaaggactggcttggttgctga
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