Xiphophorus maculatus (southern platyfish): 102226553
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Entry
102226553 CDS
T02923
Name
(RefSeq) filamin-C-like isoform X1
KO
K27393
filamin-C
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102226553
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102226553
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102226553
Intermediate filaments
Intermediate filament-binding proteins
102226553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Big_3_5
Y_Y_Y
DUF5060
CH_2
CFSR
Motif
Other DBs
NCBI-GeneID:
102226553
NCBI-ProteinID:
XP_023182641
Ensembl:
ENSXMAG00000016525
LinkDB
All DBs
Position
2:complement(20547952..20577728)
Genome browser
AA seq
2744 aa
AA seq
DB search
MMSNNYGEDQLPPQYYQATDFGDEEDDEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKC
VNKTITDLQRDFSDGLKLISLLEVLSQKKMYRKHHNRPNFRQMKLENVSVALEFLDREHI
KLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDDEDDEETKKLTPKQRLLGWIQNK
VPQLPINNFNRDWRDGKALGALVDNCAPGLCPDWAGWDPNQPVQNAREAMQQADDWLGVP
QVIAPEEIVDPDVDEHSVMTYLSQFPKAKLKPGAPLKPKQLFPDKVKAYGPGIEPHGNKV
LQPAVFTVETLEAGSGEVLVFVEDPEGHKEEAKVKPNKNKNGTYTVTYLPKVEGVHKVKV
LFAGQDIDKSPYSVNVAKAMGDPSKVHARGPGLDATGNMANKPTYFDIYTAGAGTGDISV
VIVDPQGKKDTVELILENKGDSVFRCTYRPVLEGPHAIHVLFAGQEIPKSPFNVNIAEAP
AVAPPPGAPLQIAPQSVRTPPGAKGVPPSKPGRPTINPNACRATGRGLQPKGVRVKEVAD
FKVFTKGAGSGALNVSVKGPTGAEEQVKVRDAGNGVYECEYYPLTPGKYTVSITWGGQPI
ARSPFEVEVGDEAGFQKVRAWGPGLKTGMVGKSADFVVEAIGTEVGTLGFSIEGPSQAKI
ECDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKDSPFMAHILPAVNDVFPEKVKAYGPG
LQPTGVIVNKSTDFTIDARMAGKGHLKIYAQDAEGCTFNIKITDRGDSTFVCAYTPVKPI
KHTIIITWGEVNVPNSPFRVLVGEGCHPDKVKVYGPGVEKTGLKANEPTYFTVDCSEAGQ
GDISIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYTPPGPGRYTIMVLFADQEIPISP
FKVKVDPCHDAGKVRAEGPGLNKTGVEVGNPTHFTVYTKGAGKAKPEVHFAASGPGEAVR
DFEIIDNHDYSYTVKYTALQQGNMAISVTHGGDPIPKSPFHITVAPALDIGKVKVEGLDT
KVEVGRDQEFTVNTKGAGGQGNVGVKMTSPSGRPIPCKLESDKAKNTHGVKYIPPEEGQY
KVDVTYDGNPVLGSPFGVEAVMPADPSKVRAFGPGLQGGIVGKPAPFTIDTKGAGAGGLG
LTVEGPCEAKIECQDNGDGTCSVAYLPTEAGEYAINILYAERHIPGSPFKAAVRPAFDPS
KVTASGPGLEKAKAGEPAAFTVDCTRAGDAELTIEIVSETGVKAEVHIQKTSEGTFSVTY
IPSFHGTHTITIKYGGHAIPYFPKVLQVEPSVDTSGVHVYGPGVEPRGVLREVTTHFIVD
ARSLSKAGGNRVKVRVVNPSGSNTDTYITDKADGTYRVEYTAFEDGMHLIEVLYDGAPAP
KSPFRVFVVEGCDPTRVRAFGPGLEGGITNRPNCFTVETRGAGTGGLGLTIEGASEAKIS
CKDNKDGSCSVEYVPFTPGDYDVNINYGGQPIPGSPFRVPVKDPVDPTKVKCSGPGLGAG
VRAHVPQTFTVDCTQAGQAPLDVKLYGPTGTVEPMGVKNNGDGTHTVHYTPAQDGPYTVA
VKYADQEVPHSPFKVMSQPGHDASKVRASGPGLDTKGVSASLPVEFTIDARDAGEGLLTV
QILDPEGKPKNATIQDNRDGTYTVSYVPDSTGPYTITIKYGGDEIPYSPYRIQSLPTGDA
SKCRLTVSIGGHGVSSLQKLQTSEDTVITVDAKAAGKGKVTCKVLTPQGMELDMDVVENH
DGTFDIYYTAPEPGKYVITIRFGGENIPKSPFHVVASNEPVVPRDPVDPLFRPVNFLVPF
TPQQGEITGEVRMPSGKTARPHITDNKDGTITIKYQPTERGLHEMDIKYDGNHIPGSPLQ
FYVDAVNSGVVTAYGPGLSYGMVNRAATFTVVTKNAGEGGLSLAVEGPSKAEITCKDNKD
GTCTVSYLPTAPGDYNIIVKFDNKHIPGSPFTAKITGDDTITRTSQLNVGTAADVSLKIA
ETDLSSLTASIRAPSGNEEPCLLKRLPNRHLGISFTPKEVGEHEVSVRKNGMHVANSPFK
IMVGQSEIGEASRVKAFGKGLVEAHTFEMAEFFVDTRNAGYGGLALSIEGPSKVDINCED
VEDGTCRVTYCPTEPGSYIVNIKFAEKHIPGSPFTVKVTGEGRIKESITRKRQASSIASV
GSTCGLNLKIPGNWFQMVSAQERLTRTFTRSSHTYTRTERTEISKTRGGETKREVRVEES
TQVGGGGGGGSPFRDVFGDFLGRESLSSFAGITARPEPESGSQAMTAQVTSPSGKTVDAD
IVDGGSSTYSVRFIPQEIGPHTVNVKYRGQHVPGSPFQFTVGPMGEGGAHKVRAGGPGLE
RGVAGAPSEFSIWTREAGAGGLSIAVEGPSKAEISFEDRKDGSCGVSYVVKEPGDYEVSI
KFNNEHIPDSPFIVPIATLSDEARRLTVTSLQEKDLKVTQEASFMVQRNGARGVVDAKVH
TPSGSSEECYVSDLDGDKSAIRFIPRENGVHSIDVKFNGCHIPGSPFNVRVGDPGLIADP
GLVTAHGAGLLGGTTGVPSEFVVNTCNAGSGALSVNIDGPSKVKMDCRECPEGYRITYTP
MAPGNYLITIKYGGPQHIVGSPFKAKITGARLSGGHSLHETSSVLVETVTKTSKVGGAYS
SSSSATSAKLTCDASKVVCRGAGLSKALVGQKNNFTVDCSKAGTNMLMVGVHGPLAPCEE
VYVKHMGNKLYNVTYTVKDKGSYTVIVKWGDDNVPGSPYKVTVP
NT seq
8235 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaacaactacggcgaggatcagctgcctccgcagtactaccaggccacggac
ttcggggacgaggaggacgacgagatgcccgccacggagaaggacctggccgaggacgcg
ccgtggaagaagatccagcagaacaccttcaccaggtggtgcaacgagcacctgaagtgt
gtcaacaagaccatcaccgacctgcagagggatttcagcgacggcctgaagctcatctcg
ctcctggaggtgctgagtcagaagaagatgtacaggaagcaccacaacaggcccaacttc
cgccagatgaagctggagaacgtgtccgtggcgctggagttcctggacagggagcacatc
aaactggtctcaatagacagtaaagccattgtggacgggaatctaaagctcatcctgggc
ctcatatggacgctcatcctccactactccatctcgatgcccatgtgggacgacgaggac
gacgaggagaccaagaagctgacccccaagcagcgcctgctgggctggattcagaacaag
gtgccgcagctgcccatcaacaacttcaaccgcgactggcgagacgggaaagccctcgga
gccctggtggacaactgcgccccgggtctgtgtcctgactgggcggggtgggaccccaat
cagcccgtgcagaatgccagagaagccatgcaacaggccgacgactggctgggcgtccct
caggtgatcgcccctgaggaaatcgtggacccagatgtggacgagcactcggtcatgacg
tacctgtctcagttccccaaggccaagctgaaacccggcgctcctctaaaacccaagcag
cttttcccagacaaggttaaagcctacggaccaggtattgagcctcatggcaacaaagtc
ctgcagcccgccgtgttcacggtggaaactctggaggcgggcagcggggaagtcttggtg
tttgtcgaggatcctgaaggacacaaagaggaggccaaagttaagcccaacaaaaataag
aatggaacctacactgtcacctaccttccaaaagtggagggtgtccacaaggtgaaggtg
ctgtttgcaggtcaggacatcgacaagagcccctactccgtcaatgtggctaaagcaatg
ggcgacccaagcaaagtgcacgcccggggcccaggtttggatgctacaggcaacatggcc
aacaagccaacctactttgacatctacacagctggcgctggtactggtgacatcagcgtg
gtcatcgttgatccgcagggtaaaaaggacaccgtggaactcatcctggaaaataagggc
gacagtgttttccgttgtacctatcgcccggtgctggagggtcctcacgccatccacgtg
ctgtttgctggccaggagatccccaagagccctttcaatgtcaacatcgcggaggctccg
gcagttgctcctcccccaggagctcctctgcagatagctcctcagtcagtgcgcacccct
cctggagcgaagggtgtccctccctcaaaacctggccgtccaaccataaaccccaacgct
tgcagagctactggcagaggactccagcctaaaggcgtgagagtgaaagaggtggcagac
ttcaaagttttcaccaaaggagctggcagcggtgccctgaacgtctctgtcaaaggacca
actggagcagaggagcaagtgaaagtgcgagacgccgggaacggggtgtacgagtgcgag
tattacccactgactcccggtaaatacacagtgagcatcacctggggaggccagccaatc
gcgcgcagcccctttgaagtggaggtgggagacgaagcaggttttcagaaggtgagggcc
tggggcccgggtctgaagactggcatggtgggaaaatctgctgattttgtggtcgaagct
atcggcactgaagttggaactctgggcttctccatcgaaggcccgtcgcaggctaaaatc
gagtgcgatgacaagggcgacggctcctgtgacgtgcgctactggcccaccgagcccggc
gactacgccgtccacgtcatctgtgacgacgaagacatcaaggacagccccttcatggct
cacattcttcctgctgttaacgatgttttcccagaaaaggtaaaagcctacggaccaggc
ttgcagccaactggggtcatcgtaaacaaatccaccgatttcaccattgatgcccgcatg
gctgggaagggccacctgaagatctatgcccaggacgccgaaggctgcaccttcaatatc
aagatcacagacaggggagatagcacgttcgtgtgtgcctacactcctgtcaaacccatt
aaacacaccatcattatcacctggggggaggtcaacgtgcccaacagccccttcagggtg
ctggttggagagggctgtcatcccgacaaagtcaaggtctatgggcccggagtggagaag
acggggctcaaagcgaacgagccgacgtacttcaccgtggactgcagcgaggccggccaa
ggagacatcagcatcggaatcaagtgcgccccgggggtggtcgggcctgcagaggccgac
atcgactttgacatcatcaagaatgacaatgacaccttcactgtcaaatacactcctcct
ggcccgggccggtacaccatcatggtgctgtttgctgaccaggaaattcctatcagtcca
ttcaaagtgaaggtggacccctgccacgacgctggcaaagtgagagcggagggtcctgga
ctcaacaagacaggtgtggaagtgggcaatccaacccacttcaccgtctacacgaaggga
gctgggaaggccaaacctgaggtccattttgcagcgtcaggccctggggaggcggttcgg
gactttgagataatcgataaccatgattattcctacactgtgaagtacacggctcttcaa
cagggtaacatggctatttccgtgactcacggaggagatcccattccaaaaagccccttc
cacatcacggtggcaccagctttggatatcggaaaagtgaaagtggaagggttagatacc
aaagtggaggttgggagggatcaggagttcactgttaacacgaagggagccggtggccag
ggcaacgtgggagttaagatgacttctccctctggccgaccaatcccctgcaagctggag
tcagacaaagccaaaaacactcacggtgtgaagtacattcccccagaggagggccagtac
aaggttgatgtcacctatgatgggaaccctgtgctggggagtccctttggggttgaagcg
gtcatgccagcggatccttcaaaggtgcgagcctttggtccaggcctgcagggcggcatt
gtgggtaaaccagctcccttcaccatcgatacaaaaggagctggtgccggtggtcttggc
ctgacagtcgagggtccctgcgaggcaaagattgagtgccaagacaacggcgatggcaca
tgctcggtggcgtatcttcccaccgaggcgggcgagtatgccatcaacatcctgtatgcc
gagcggcacatccccggttctcctttcaaagcggcggtccgcccggccttcgatcccagc
aaggtgacggctagcggaccgggcctggagaaggccaaggcgggtgaaccagccgccttc
accgtggactgcaccagagcgggcgacgcggagcttaccatcgagatcgtgtccgagacc
ggcgttaaggccgaagtgcacatccagaaaacatcagagggcacattctccgtcacgtac
atcccatccttccatggcacgcacaccatcaccatcaagtacggtgggcacgccattccc
tacttcccaaaggtgctgcaagtagaaccgtctgtggacaccagtggggttcacgtttat
gggcctggagtggagccgagaggggtcctcagggaagtcacaacccacttcattgtggat
gcgcgttccctcagcaaggctggaggcaaccgcgtgaaggttcgcgttgtcaacccttct
ggctccaacacagacacctacatcactgacaaggcagacggcacttacagagtggagtac
acggccttcgaggacggtatgcatttgattgaggtcctgtacgatggcgcgcccgctcct
aagagtcccttcagagtgtttgtggtggaaggatgcgatccaacccgtgtgcgtgcgttt
ggaccgggtctggagggaggaataaccaacaggcctaactgtttcacagtggaaaccagg
ggtgccggtacaggaggcctgggcctgacaatcgagggagcctcagaggccaaaatatcc
tgcaaggacaacaaagatggcagctgcagcgttgagtacgtccccttcactcctggagac
tatgacgtaaatatcaactacggaggccagccgatccccggcagtccgttccgtgtgccc
gtgaaggacccggtggatccaaccaaggtgaaatgctccggtccaggactgggcgccgga
gtgagggcccacgttcctcagactttcacagtagactgtacccaggctggacaggcgcca
ctggatgtcaaactctacggacccacaggcaccgtggagccgatgggtgtgaagaataac
ggcgatggcacccacacagttcactacaccccggcgcaggacggcccctacactgtagct
gttaaatatgcagatcaggaagtcccgcacagcccattcaaggtaatgtctcagcctggg
catgatgccagcaaggtccgcgccagcggccccggtctagacaccaaaggagtgtctgcc
agcctgcctgttgagtttacgattgatgcccgggacgctggagagggactgctcactgtg
cagattctggacccagaggggaagccgaagaacgcgaccatccaggacaacagggacggg
acctacaccgtgtcctacgtgcccgactccacgggtccttacacgatcaccatcaagtac
ggaggagacgagattccctactctccgtatcgaatccagtcgcttcccacgggagacgcc
agcaagtgccgcctcacggtttcaattggcggacatggagtttcgagtctccagaagctg
cagacctctgaggacacggtcatcacggtggatgccaaggcagccgggaaaggcaaggtg
acctgcaaggtgctgactccgcaggggatggagctggacatggacgtggtggagaatcac
gacggcacctttgacatttactacacggccccagaacctgggaagtatgtgatcaccatc
cgctttgggggggagaacatcccaaagagcccctttcatgtggtggcctcaaacgagccg
gtggttccccgtgaccccgtggatcctctctttcgtcccgttaacttcctggtgccgttc
acgccacagcaaggagagatcacaggtgaggtgcggatgccctctggcaagacggcccgc
ccgcacatcaccgacaacaaagacggcacaatcaccatcaagtaccagcccacggagagg
ggcctgcatgagatggacatcaaatatgacggaaatcacattccaggaagcccgctgcag
ttctatgtggatgctgtgaacagcggagtggtgaccgcctatggtccgggtctaagttac
ggcatggtcaacagagctgccacgttcaccgtggtaaccaaaaacgcaggagaaggtggt
ctgtcacttgcggtcgagggtccctctaaagccgagatcacctgcaaggacaacaaagac
ggcacctgcaccgtgtcctacctgcccacagctccgggagactacaacatcattgtgaag
tttgacaacaagcacattcccggcagccccttcacggctaagatcactggggacgacacc
ataaccagaacatcccagctcaacgtcggcacggcagccgacgtgtccctgaagatcgcg
gagactgatctgagctccctgactgccagcatcagagcgccgtcaggcaacgaggagccc
tgcctgctcaaacggctgcccaacagacacctcggcatctctttcaccccgaaggaggtt
ggcgagcacgaggtgagcgtgaggaagaatgggatgcacgtggccaacagccctttcaaa
ataatggtcggccagtcggagatcggcgaggccagccgagtgaaggccttcgggaaaggg
ctggtcgaggcgcacactttcgaaatggctgaattctttgtggacacgaggaatgctggc
tacggcggtttggcgttgtccattgagggtccgagcaaagtggatataaactgcgaagac
gtggaggacgggacgtgcagggtgacctactgccccacagaacctgggagttacatcgtc
aacatcaagtttgctgaaaagcacatcccaggaagtcctttcacagtgaaggtgaccgga
gaagggaggattaaggagagcattaccaggaagagacaggcttcctccatcgcctcagtg
ggcagcacttgcggcctcaacctcaagatcccaggaaactggttccagatggtttccgct
caggagaggctaaccaggacgttcacccggagcagtcacacatacactcgcacggagcgc
acggagatcagcaagacccgcggcggggagaccaagagggaggtgcgcgtggaggagagc
acccaggtaggaggaggaggaggaggagggagccccttcagagacgtgttcggagacttt
ctgggcagagagagcctcagcagcttcgccggcatcaccgccagacccgagcccgagagc
ggctcccaggccatgacggcgcaggtgacgagccccagcgggaagacggtggacgcggac
atcgtggacggaggaagcagcacgtacagcgtccgcttcatcccgcaggagatcggcccc
cacaccgtgaacgtcaagtacaggggccagcacgtgccgggcagccccttccagttcacc
gtggggccgatgggtgaaggcggggcccacaaggtccgcgcaggaggtcccggcctggag
agaggcgtggctggagccccatccgaatttagcatctggacccgcgaggccggcgccggt
ggcctctccatcgccgtggaaggccccagcaaggcggagatctccttcgaggacaggaaa
gacggctcctgcggcgtctcgtacgtcgtgaaggagccaggtgactacgaggtgtcaatc
aaattcaacaatgagcacatccctgacagcccgttcatcgttccgatcgctacgctgtca
gacgaggcccgcaggctcactgtgacgagccttcaggagaaggacttgaaagtaactcag
gaggcctccttcatggtgcagcgcaacggggcccgaggtgtggttgatgccaaagttcac
acgccctccggatcatccgaggagtgctacgtcagcgatctggacggggacaaaagtgca
atccgtttcattccacgcgagaatggcgttcactccatcgacgtcaagttcaacgggtgc
cacattcccggaagtcccttcaacgtgcgagtgggagatccgggtctgatcgccgatccc
ggtctggtgacggcccacggagccgggctgctgggaggaaccacaggtgtgccctccgag
ttcgtggtcaacacctgcaatgccggctccggcgctctgtcggtcaacatcgacggccct
tccaaggtgaagatggactgtcgagagtgtccagaaggctacaggatcacctacacgccg
atggcgcccggcaactatctcatcaccatcaaatacggcggaccgcagcacatagtgggc
agccccttcaaagccaaaatcacaggcgcccggctgtcagggggacacagcctccatgag
acctcctccgttttggtcgaaactgtcacgaagacctccaaagtcggcggcgcctacagc
tcgtcttcctccgccacctcagccaaactgacgtgcgacgccagcaaggtggtttgtcgt
ggagcggggctgtccaaggctttggtcgggcagaaaaataacttcactgttgactgcagc
aaagcaggtaccaacatgttgatggtgggcgtgcacggacccctagcgccatgcgaggag
gtttatgtcaaacacatgggcaacaagctgtacaacgtcacctacaccgtcaaggacaag
ggcagttacaccgtcatcgtcaaatggggcgacgataatgtcccggggagcccctacaaa
gtgactgtaccttaa
DBGET
integrated database retrieval system
