KEGG   Xiphophorus maculatus (southern platyfish): 102226782
Entry
102226782         CDS       T02923                                 
Symbol
pdgfa
Name
(RefSeq) platelet-derived growth factor subunit A isoform X1
  KO
K04359  platelet-derived growth factor subunit A
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04010  MAPK signaling pathway
xma04020  Calcium signaling pathway
xma04510  Focal adhesion
xma04540  Gap junction
xma04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:xma00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102226782 (pdgfa)
   04020 Calcium signaling pathway
    102226782 (pdgfa)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102226782 (pdgfa)
   04540 Gap junction
    102226782 (pdgfa)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    102226782 (pdgfa)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:xma04052]
    102226782 (pdgfa)
   00536 Glycosaminoglycan binding proteins [BR:xma00536]
    102226782 (pdgfa)
Cytokines and neuropeptides [BR:xma04052]
 Cytokines
  Growth factors (RTK binding)
   102226782 (pdgfa)
Glycosaminoglycan binding proteins [BR:xma00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   102226782 (pdgfa)
SSDB
Motif
Pfam: PDGF_N PDGF Phage_TAC_11
Other DBs
NCBI-GeneID: 102226782
NCBI-ProteinID: XP_005809335
Ensembl: ENSXMAG00000004457
LinkDB
Position
16:12769330..12791623
AA seq 208 aa
MRATICCFLLWTTYLLATAEKEVEFPQELIDRLSNSEIHSISDLQRLLEIDSIGTGNDVV
EEHKHHKHHNHHKNSSHHHGYYNELKSSQLHSRRKRSIVEEAVPAACKTRTVIYEIPRSQ
VDPTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVRRRPKLKEVFV
RLEDHLECVCTSQHHVVEHLDAETADVR
NT seq 627 nt   +upstreamnt  +downstreamnt
atgagagccacaatttgctgcttcctgctgtggacgacgtacctgctggccactgctgag
aaggaagtggagtttccacaggagctgatcgatcgactctccaacagtgaaatccacagc
atcagcgacctccagcggttactggagattgactccataggtacgggaaacgatgttgtt
gaggagcacaagcaccacaagcaccacaaccaccataagaactcgtcccatcatcatggt
tactacaatgaactgaaaagctcccagttgcacagccgacgcaagaggagcattgtcgaa
gaggccgtcccggcagcatgcaagacgcggacggtgatctacgagatcccccggagccag
gtggatcccacatctgccaacttcctgatatggccaccctgtgtggaggtgaagcgctgc
acaggatgctgcaacaccagtaacatgcgctgtcacccttcacgcaagcaccaccgcacc
gttaaggtagccaaagtggagtacgtgaggaggagacccaagctgaaggaggtctttgtg
aggttagaggaccacctggagtgtgtgtgtacatcacaacatcatgtggtagaacactta
gatgcagaaacagcagatgtgaggtga

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