Xiphophorus maculatus (southern platyfish): 102229335
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Entry
102229335 CDS
T02923
Name
(RefSeq) plakophilin-1-like
KO
K10387
plakophilin 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102229335
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
102229335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARMC9_ARM
Atx10homo_assoc
HEAT_EZ
HEAT
Symplekin_C
IL4
Motif
Other DBs
NCBI-GeneID:
102229335
NCBI-ProteinID:
XP_005802290
Ensembl:
ENSXMAG00000018083
UniProt:
M4AUH0
LinkDB
All DBs
Position
20:7868220..7878815
Genome browser
AA seq
732 aa
AA seq
DB search
MSSADPLKSAISIRSSDDTSLALPSANEYHSREQRVKAQVQSLRRTKSRHSSSGRSGSTS
LSPTSPEYDSVFLDGAKSQLSSSNGGDFLSNGSSKVFTTNRNMNNQHMISNMKRSTVRKQ
TINHYDSRYGAVGGVASLGLANTSRSEPGLALNSSVPLPSVPMQIQPTVQQRGNRNTYMK
HRSNSNHYIKRTISQTHPLYALNGSGLMHKQSQYGVSQPEMNKAQSQHTVTDSSSKNQMN
SEVNGNSLSSNITMQEAVQFLSSQDEKYQHCGASYIQHNTFINDKAKEEVFTLNGIPPLV
RLLQSPNSQVKSTASATLRNLTFQNNKNKEEIQRCDGIPEVVAQLKASGSAELDKQLTGL
LWNLSSVDNLKSDLLKNALPVLMERVILPYTTGSRDTVSAEVFCHTTACLRNLSSAKEAS
RQTMRKCRGLIDGLVAYMKECVANCKTEDETLGHCVSILHNLTFHLEEEFSSLFINMNSL
AKNMISNVSQNNANSVGCFSAPSKPLQTDRPFDYAVIEDPQPNGAGLLIHSKTLKDYLSL
LGLTERQPLQDACWGILHNLTARESTVSYVISQIIVKKLNGMHYISPFLKSDKVNMQKNA
MGLVVNLIKNPNLCSVVGEKAIPDLLSVLSKDTAGANESDDTLALACQAASGLVLNDVEW
TKRHLSEKLIKSLNGISQNIYFSKSSKAASVLLIRMWSNKELQSSLKKLGFSKSMFINDT
TMAVQKSLHVVD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgcggatcctctgaaatcggcgatttccatcaggagctcggacgacacgtcg
ctggctctgccgtcggcgaatgagtatcattcccgggagcagcgcgtcaaggcgcaagtg
caatctctgaggaggacgaagtcaaggcactccagcagcggcaggagcggatctacttct
ctttccccaacaagccccgagtacgactctgtgtttttagatggcgcaaagtctcagttg
agttcatctaatggaggcgattttttgagcaatggctcctcaaaagtttttaccacaaac
agaaatatgaataaccaacacatgatcagtaacatgaaaagatccactgtaagaaagcag
actataaatcactatgatagcaggtatggcgctgttggcggtgtagccagtctgggtctt
gctaacaccagtcgcagcgagcccgggctggccttgaacagcagcgtcccactgccgtcc
gtcccaatgcagatacaaccaaccgtacaacagcggggcaacaggaacacctacatgaaa
caccgcagcaacagcaatcactatataaagaggaccatctcccaaacccaccctctgtat
gctttaaatggatcgggtctgatgcacaagcaaagccagtacggagtcagtcaacctgaa
atgaacaaggcgcagtcgcaacacaccgtcactgattcttcatccaagaatcaaatgaac
tcagaagtaaatggaaacagtttgagttctaacatcactatgcaagaagctgtgcagttt
ctttccagccaagatgagaaataccaacactgtggtgcttcctacattcagcacaacact
ttcattaatgacaaagcaaaagaagaggtttttaccttgaatggtatcccgcccctcgtg
cgtctgctgcaaagccccaactcacaggtcaaaagcacggcctctgccaccctgcgaaat
ctgacctttcagaacaacaaaaacaaagaagagatccaacgctgcgatggcatacccgag
gtggttgctcagctcaaagcctcaggatctgcagaactggacaaacagctgacaggtctt
ttgtggaatttgtcgtctgtagacaacctgaagtcagacctgctgaagaatgctctgcct
gttctaatggagcgtgtgattctgccctacacgacaggctctagagatactgtcagtgct
gaggtcttctgccacaccacagcatgccttcgaaacctcagcagtgcaaaggaggccagc
agacagacgatgaggaaatgtcgaggtttgatcgatggcttagtcgcttacatgaaagaa
tgtgtggcaaactgtaaaacagaagatgagactttaggacactgtgtgagcattctgcac
aatctgacatttcacctggaagaagaattttcaagtctgttcatcaacatgaattctttg
gcaaagaatatgatcagtaacgtcagtcaaaataacgccaactctgttggttgcttcagt
gcaccaagcaaacccctacaaactgatcgtcccttcgactatgcagtcattgaggatccg
cagcctaacggagcaggccttttgatccactccaaaacgctgaaggattatttgtctctg
cttggcttgaccgagcgccaaccgctgcaggatgcctgctggggcatactgcacaatctc
actgcgcgtgaaagcactgtctcttatgtaataagtcagatcattgtgaagaaactgaat
ggcatgcattatatcagccccttcttaaagtcagataaagtcaacatgcagaagaacgca
atgggtttggtggtaaatttgatcaagaacccaaatctgtgcagtgtcgttggtgaaaaa
gccatcccagacctactaagtgtcctctcaaaagacacggctggagccaacgagtccgat
gacactcttgctttggcctgccaggctgccagcggcctggttctgaatgacgttgaatgg
accaaaagacatttaagcgaaaaactgattaaatccctgaacggcatcagccaaaacatt
tatttttccaaatcgagcaaagctgcttcagttcttctcatcagaatgtggtctaataaa
gaacttcagagctctttgaaaaagcttgggttcagcaagtctatgtttatcaatgacacc
accatggcagtacaaaaatctctccacgttgtggattaa
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