Xiphophorus maculatus (southern platyfish): 102229755
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Entry
102229755 CDS
T02923
Name
(RefSeq) platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04010
MAPK signaling pathway
xma04020
Calcium signaling pathway
xma04510
Focal adhesion
xma04540
Gap junction
xma04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102229755
04020 Calcium signaling pathway
102229755
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102229755
04540 Gap junction
102229755
09142 Cell motility
04810 Regulation of actin cytoskeleton
102229755
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xma01001
]
102229755
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xma04090
]
102229755
Enzymes [BR:
xma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
102229755
Protein kinases [BR:
xma01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
102229755
CD molecules [BR:
xma04090
]
Proteins
102229755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
102229755
NCBI-ProteinID:
XP_005803628
Ensembl:
ENSXMAG00000006394
UniProt:
M3ZW53
LinkDB
All DBs
Position
11:15301180..15311723
Genome browser
AA seq
1040 aa
AA seq
DB search
MTASIRATTGSLNLLHFLLGVFLSRPEGGVALELLPSSPEVLLQSQSNFSVVCSGWSEVK
WRLPQDADGGPEVLVQVDGSSRILQLLGATWRSSGRYTCEEPSADQSRAVDVFVPGQGPE
QWFVPQSSSQVYKQSEEGTIPCVVSDPKLNVSLFERPGRTAVGGVRYEPALGFMGRLNDA
GHVCVATDGDQEKESQVFYVFTVLEPKQMEMELSVSSQVLKQGEVLTMNCSVRDVDMAFF
TWTFPRRQEVEPLTDILSNEIRSFINISKATESDSGVYVCKAQDSQFRWTVRKNITITVL
DRGYVYLWPSGETNISSLVHHTVELKVQCDAHPTPTFTWSRPNQTIAIETSSINTTHLTS
SRYVSTLTLHQVQLDQTGTYTATASNEDSREDIIFYLQVTAPPRIVSLSEVDKKDILCVS
EGVPTPSVTWYTCPRSIRCSNLSDGWRSQLGVLEQDVTTVIEGGGTLVKSVLTLKTLNSV
SAVRCEATNAAGGRARDLRVLRTSLLSQVVVLVAVLVLVIIGVIFFIILIALWRNKPHYE
ARWKLMESEGSDGQPGSYVDPGDLPYSSAWEIPRDQVALGQVLGSGPFGRVVEATVSGLT
DSDAPTKAAVKIMKSRRDAAQSLVSELKVLGYLGPHLNVVNLLGACTSPGPVYLITEFCR
HGNLLSYLQRNKDTFGQVDMPIRSNSDGGYMDMNQDGRGRYVPLKELKDTEQGTSHAPTD
HQKVPSLLLSDSPVLTLEDLLSFSFQVAQAMDFLSSRKCVHRDLAARNVLVCEGRLLKIC
DFGLARDLQKNEDYIIRRNSFLPLRWMSPESIFQNIYSTESDVWSYGVLLWEIFSLGCAP
YPDLLTTRQFSSALKRGHRMGRPEHATSDMYAVMKQCWDEDPLSRPSFSSLVAAVGNMLP
ADYRQRYAQLTENFLRGDGPAVLQSRRSLSRTTETETETDVHLDRNSSHCAARFQEAELG
FHFTGSPSSDVKERLLEAEPDDSGPSHNAYIMPVVTMATSSSTALDAVSPLLSDPAAILE
SQEVTSPPEAPAEEEEESCL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgacggcatccatcagagccacaacaggaagtctgaacctcctgcacttcctgctgggt
gtgttcctgagtcgtccagaagggggcgtggccctggagctgctaccttcctccccagaa
gttctcctccaatcacagtccaacttctccgtggtgtgttcagggtggagtgaggtgaaa
tggcgcttgcctcaggatgctgacggaggtccagaggttctggtgcaggtcgacggctcc
agtcgcatcctgcagctccttggcgccacctggaggagctccggcaggtacacctgcgag
gagccgtctgccgatcagagccgcgcggtggacgtcttcgtacctggacaaggtccagag
cagtggttcgtcccacagagttcctcccaggtgtacaagcagtcagaggaaggtaccatt
ccctgcgtggtgtccgacccaaagctcaacgtctctctgttcgaacgacccggcagaacc
gcagtgggcggggtcagatacgagccggctctgggcttcatgggacgcctcaacgatgca
ggacatgtctgcgtggcgacagacggagaccaggagaaggagtcccaggtcttctatgtc
ttcaccgtcctcgaaccaaagcagatggagatggagctgtcggtgtccagccaggtcctg
aagcagggggaggtcctgaccatgaactgctccgtcagagatgtggacatggccttcttc
acttggaccttcccccgcagacaggaagtagaacctctgacagacatcctgtccaatgaa
attcgctcgttcattaacatctccaaggcaacagagtcagactcaggtgtgtatgtgtgc
aaagctcaggactcgcagtttagatggaccgtgaggaaaaacatcacaataactgttctg
gaccgaggctatgtctacctgtggccctcaggtgagaccaacatctcatctctcgtccac
cacaccgtggagttgaaggtacaatgtgacgcccaccccacgcccaccttcacctggtcc
aggccaaaccagactatcgccatagaaaccagctccatcaacaccactcacctgaccagc
agcaggtatgtgagcaccctgacgctccatcaggtgcagttggaccagacaggaacttac
actgcaactgcatccaatgaggacagcagagaggacatcatcttctacctgcaggtcaca
gctcctccaaggattgtgtctctgtctgaagttgataagaaagacatcctgtgtgtcagt
gaaggagtcccgactccatctgttacctggtacacctgtccacgttcgatcaggtgcagt
aatctgagtgacggctggaggagccagttaggggtgttggaacaggacgtcaccacagtg
atagaaggaggcggtaccctggtaaaaagtgtgttgactctgaaaactctgaactctgtg
tcggctgttcgctgcgaagctacgaacgcagcaggaggacgagcgcgagacctgcgagtc
cttcgcacctcccttctgtcccaagtggtcgtcttggtggcggtcctggtcctggtcatc
ataggtgtgatcttcttcatcatcctcattgctctctggagaaacaagcctcactatgaa
gctcgctggaagctgatggagtctgaaggttctgacggacagccgggttcctacgtggac
cctggagacctgccctacagctccgcctgggagatccccagagaccaggtggcactcggt
caggtcctgggttctggtccatttggacgggttgtagaggcaacagtttctggtctgact
gactctgacgcaccaaccaaagctgcagtgaagatcatgaaatccaggagggatgcggcc
cagtctctcgtgtccgagttaaaggttctgggttacctgggtcctcatctgaacgttgtc
aacctgctgggagcctgcaccagcccaggtccagtttacctgatcactgagttctgtcgt
catggcaacctgctgagctacttgcagaggaacaaagacacatttggacaggtggacatg
cccatcaggagtaacagcgacggcggctacatggacatgaaccaagacggacggggacgt
tatgtccctctgaaggagctgaaggacactgagcaggggacaagccacgcccccacagac
caccagaaggtgccatcgctcctccttagtgactctcccgtcctcaccctggaagacctg
ctcagtttctccttccaggtcgctcaggccatggatttcctgtcctccaggaagtgtgtc
cacagagacctggcagctaggaacgtcctggtctgtgaggggaggctactgaagatctgt
gattttggtttggccagagaccttcagaagaacgaagattacatcatcaggagaaacagc
ttcctgccactgaggtggatgtctccagagagcatcttccagaacatctacagcactgag
agcgacgtgtggtcctacggagtcctgctgtgggagatcttctctctgggctgcgccccg
tatcctgacctcctgacaacccgacagtttagttctgctctgaagagaggacacagaatg
ggccgaccggaacacgctacgtctgacatgtatgctgtgatgaagcagtgctgggatgaa
gatcctctctccagaccatctttctcatcattggttgctgctgtgggcaacatgttgcca
gctgactaccgacagcggtacgcccagctgaccgaaaacttcctgagaggagacggcccg
gccgtactgcagtccagacgcagcctgtcccggacgaccgagacggagacagagacggac
gtccatttggacagaaactcctcccactgtgccgcacgcttccaggaagctgaactcggc
tttcacttcacaggaagtccttcctctgacgtgaaggagcgcctgctggaggcggaacca
gatgactcaggcccctcccataatgcttacatcatgcctgtcgtcaccatggcaaccagc
agcagcactgcgctggacgcagtcagccctttgctgtcagatccggccgccatcttggag
tcacaggaagtgacatcaccaccagaagctcctgctgaggaagaggaggagagctgcctg
tga
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